Vicugna pacos (alpaca): 102528272
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Entry
102528272 CDS
T08098
Symbol
CIC
Name
(RefSeq) LOW QUALITY PROTEIN: protein capicua homolog
KO
K20225
capicua transcriptional repressor
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
102528272 (CIC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpc03000
]
102528272 (CIC)
Transcription factors [BR:
vpc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102528272 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
102528272
NCBI-ProteinID:
XP_031537695
UniProt:
A0A6J3ASZ0
LinkDB
All DBs
Position
11
AA seq
2513 aa
AA seq
DB search
MKPMKKACASLPGSGSGGKSPPATRAKALRRRGAGEGDKPEEEDDDAQQQQPGPEEAEEG
EEEEAERGPGAEGLPPELHSHDPAPGPAEEPKVEGEAGRWEPSLSRKTATFKSRAPKKKY
VEEHGAGSGSSSGVAGAPEEQARTPDEASALGVPPRPPTSTRSSSTDTASEHSADLEDEP
AEACGPGPWPPGSTSVGYDLRQLRSQRVLARRGDGLFLPAVVRQVRRSQDLGVQFPGDRA
LTFYEGAPGGGVDVVLDATPPPGALVVGTAVCTCVEPGMAAYREGVVVEVATKPAAYKVR
FSSQPGPAATLPQPPQPPHREPEEAVWVARSSLRLLRPPWDPEALPRKPSTGPEEEQAEP
GAALPPCPAALDPKQPEDAEVSKISFGGNLGACEEGEEKHPPALGTPALLPLAPPQLLSP
PPKSPAFAGPGRPGEQPSPCQEGSQGGSRSSSVASLEKGTAPAARARTPLTAAQQKYKKG
DVVCTPNGIRKKFNGKQWRRLCSRDGCMKESQRRGYCSRHLSMRTKEMEGLADSGPGGAG
RPAGVAAREGSTEFDWGDETSRDSEASSVAARGDSRPRLVAPADLSRFEFDECEAAVMLV
SLGSSRSGTPSFSPVSTQSPFSPAPSPSPSPLFGFRPANFSPINASPVIQRTAVRSRHLS
ASTPKAGVLTPPDLGPHPPPPAPRERHSSGILPTFQTNLTFTVPISPGRRKTELLPHPGA
LGASGSGGGGAAPDFPKSDSLDSGVDSVSHTPTPSTPAGFRAVSPAVPFSRSRQPSPLLL
LPPPAGLTSDPGPSVRRVPAVQRDSPVIVRNPDVPLPSKFPGEVGTASEARAGGPGRGCR
ETPVPPGVASGKPGLPPPLPAPVPITVPPAAPTAVAQPMPTFGLASSPFQPVAFHPSPAA
LLPVLVPSSYTSHPAPKKEVIMGRPGTVWTNVEPRSVAVFPWHSLVPFLAPSQPDPSVQP
SEAQQPASHPVASNQSKEPAESAAVAHEQPLGGTGNADPGRPPGATCPESPGPGPPHSMG
VVEPGKGPPPTTEEEAPGPPGEPRLDSETESDHDDAFLSIMSPEIQLPLPPGKRRTQSLS
ALPKERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILG
EWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLGLAGGHKET
RERSMSETGTAAAPGVSSELLSVTAQTLLSSDTKAPGSGSCGAERLHTVGAPGSARPRAF
SHSGVHSLDGGEVDSQALQELTQMVSGPASYSGPKPSTQYGAPGPFAAPSEGGTLAASGR
PPLLPTRASRSQRAASEDMTSDEERMVICEEEGDDDVIADDGFSTTDIDLKCKERVTDSE
SGDSSGEDPEGSKGFGRKVFSPVIRSSFTHCRPSLDPEPPGPPDPPAAFGKGYGPTPSSS
SSSPASSSASAATSFQLGSGTFKAQESGQGSTTGPLRPPPPGAGGPATPSKATRFLPTDP
ATFRRKRPESVGGLDPPGPSVIAAPPSGGGSVLQTLVLPSNKEEREASGARMPSAPAPPL
AYGAPAAPLSRPAATMVTNVVRPVSSTPVPIASKPFPSSARAEVSPNDTAGARTETVTGS
RAPGGSPLGVSLVYSDKKSGATTSTAPHLVAGPLLGTVGKAPATVTNLLVGTPGYGAPAP
PAVQFIAQGGPGSGAAAGSGAGAGSGPNGPVPLGILQPGPLSKAGGITQVQYILPTLPQQ
LQVAPAPAPGTKAVAPSGPAPTTSIRFTLPPGTSTNGKVLAATAPTPGIPILQSVPSAPP
PKAQSVSPVQAPPPGGSAQLLPGKVLVPLATPSMSVRGGGAGQPLPLVSPPFSVPVQNGA
QPPSKIIQLTPVPVSTPSGLVPPLSPASLPGPASQPQKVLLPSSTRITYVQSASGHALPL
GTSPASSQAGTVTSYGPTSSVALGFTSLGPSGPAFVQPLLSGQAPLLAPGQVGVSPVPSP
QLPPSCTAPSGPVITAFYPGSPVPTSSASLAQPSQAPPGLVYTVATSTTPPAATILPKGP
SAPATATPAPTSPFPSATAGSMTYSLVAPKAQRPTPKAPQKVKAAIASIPVGSFEAGAPG
RPGPAPRQPLEPGPAREPPASESELEGQPTTPAPPLPPETWVPPARTSPPPPPPAEERTS
SKGPETMASKFPSSSSDWRVPGLGLENRGEPPTPPSPAPAPASVPGSSSGSSEGSSGRAA
GDTPERKEAASTGKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPEFRPEEVLPSPT
LQSLATSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTPKSAKCEGD
IFTFDRTGTEAEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATAAFQA
RYADIFPSKVCLQLKIREVRQKIMQAATPTEQPPGAEAPSPDHPPTGTAAAPVPTPSPAG
GPDPTSPGSDSGTTPAAPPLPPPPEPGPGQPGWEGPPQPSPPPSGPSTAATGR
NT seq
7542 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaatgaagaaggcttgtgccagcctccccggttctggcagcggtggcaagtcc
ccaccagccactagggccaaggccctgaggcggcgaggggctggggagggcgacaagcca
gaggaggaagatgatgacgcgcagcagcagcagccagggccagaagaggctgaggagggt
gaggaggaggaggctgagcggggccctggagccgaggggctgcccccagagctgcattcc
catgacccagccccaggcccagctgaggaacccaaggtggagggggaggcaggccgctgg
gagccctcactcagccgaaagacagccacgttcaagtcacgagcgcccaagaagaagtat
gtggaggagcatggggctggcagtggcagcagcagtggggtagctggtgcccctgaagag
caggcacggacccccgacgaggccagtgccctgggtgtgcctccacggccacccacttcc
acccgctcctcctccactgacacagccagtgagcactcagctgacctggaggatgagccg
gctgaagcttgtggtccaggcccctggccccctggcagcaccagtgttggctatgacctg
cggcagctgcggtcccagcgagtgctggctcggcgtggggatggcctcttcctgccagct
gtggtgcgccaggtgcgccgaagccaggacctgggtgtgcagttccctggggaccgggcc
ctgactttttacgagggagcaccgggcggtggtgtggatgtggttttggatgccacacca
ccgccaggtgcactggtggttggtacagctgtctgtacctgtgtggagcctggtatggct
gcctaccgtgagggtgtggtggtggaggtggctaccaagccagctgcctacaaggtccgc
ttcagctcccagccaggcccagcagccaccctaccacagccaccacagccaccacaccgt
gagcctgaggaggcagtgtgggtggcccgctccagcctgcgcctgctgcggcccccctgg
gaccctgaagccctgcctagaaagccctcaacgggccctgaggaggagcaggctgagcca
ggggctgccctgcccccctgccctgctgccctggaccccaagcagcctgaggatgctgag
gtatccaagatcagctttggtggcaacctgggagcttgtgaggagggtgaggagaagcac
ccaccagccctgggcaccccggccctgctcccactggccccgcctcagctcctgtcacca
ccacccaaatccccagccttcgcaggcccaggccgccctggcgagcagccctcaccctgc
caggaggggagccagggcggcagccggagcagcagtgtggcctctctggagaaggggacc
gcgccagccgcccgggcccgcacacccctgaccgcagcccagcagaaatacaagaagggt
gatgtggtctgcacacccaatggaattcgaaagaagttcaatggcaagcagtggcgacgg
ctgtgctcgagagatggctgcatgaaggagtcacagcggcggggctactgctcacgccac
ctgtccatgcgaaccaaagagatggagggcctggcggacagtggcccaggtggggctggg
cggccggctggcgtggcagcccgtgagggtagcaccgagtttgactggggtgatgagacc
tctcgggacagtgaggccagcagtgtggcggcccgaggagactcacgtccacgcctggtg
gcccccgctgacctgtcacgctttgagtttgacgagtgtgaagcggctgtgatgctggtg
tcactgggcagctctcgctcaggcacgccctccttctctccagtctctacgcagtcgccc
ttctcgccagccccgtcaccttcaccctcaccactctttggcttccgccccgccaacttc
agccccatcaacgcctcgccagtcatccagcgtactgctgttcgcagtcgccacctgagc
gccagtacccctaaggcaggtgtgctgacgccaccagacctgggcccccacccgccgcca
cctgctccccgagagcgccattcctccggcatcctacccaccttccagaccaacctgacc
tttactgtgcccatcagccctgggcgacggaagacagagctgcttccccacccaggggca
ttgggggcctctggctctgggggcggaggagctgccccagacttccccaagagtgacagc
ttagactctggtgtggactcggtgtcccacacgcctacaccctccacaccagctggcttc
cgtgctgtgtcgcctgccgtgcccttctcccgctcccgccagccctcaccgttgctgctg
ttgcccccacctgccggcctgacctcggatcctgggccctccgtgcgcagggtgcctgct
gtgcagcgggactcacctgtcattgtccgcaaccctgatgtgccgctgccctccaaattc
cctggggaagtgggcactgccagtgaggcacgggccgggggacctgggcggggctgccga
gagaccccagtgccccctggggtggccagtgggaagcctggcctgcccccacctctgccg
gcccccgtgcccatcactgtgcctccagccgcgccgactgctgtggcccagccgatgccc
acctttggcctggcttcctcgcccttccagccggtggcctttcacccctcacctgctgcc
ctgttgccggtcctggtgcccagcagctacaccagccatcctgcccccaaaaaggaagtc
atcatgggccggcctgggacagtgtggacaaacgtggaacctcgctctgtggccgtgttc
ccctggcactccttagtccccttcttggcgcccagccagcctgacccctctgtgcagcca
agtgaagcccagcaacctgccagccacccagtggcctccaatcagagcaaagaacctgct
gagtcggcggctgttgctcacgagcagccactaggcgggacagggaatgctgaccctggg
cggcccccgggagctacatgccctgagagcccagggcccggacccccccacagtatgggg
gtggtggaacctggaaagggcccccctcccaccactgaggaggaggctcctggtcctcca
ggagagccccggctggacagtgagacggagagtgaccatgatgatgccttcctctccatc
atgtctcctgagatccagttgcctctgccgcctgggaaacgccggacccagtccctcagc
gccttgcccaaggaacgagactcatcttcagagaaggatggacgcagccccaacaagcgg
gagaaggaccatatccggcggcccatgaatgcctttatgatcttcagcaagcggcaccgg
gccctggtccatcagcgtcaccccaaccaggacaaccggactgtcagcaagatcctgggc
gagtggtggtatgccctgggacccaaggagaaacagaagtaccatgacctggccttccag
gtgaaagaggcccactttaaggcccacccagactggaagtggtgcaacaaggaccggaag
aagtccagctcagaagccaagcctactagcctggggctggcaggagggcacaaggagacg
cgggagcggagcatgtcggagacaggcactgccgctgcccctggagtgtcctcggaactc
ctgtctgtcacagcccagacgctcttgagctcggacaccaaggctccggggagcggctcc
tgtggggcagaacgtctgcacacggtcggggcacctggctcagcccggccccgagccttc
tcccacagtggggtccacagcctcgatggtggggaagtagacagccaggcactacaggaa
ctgactcagatggtgtctggccctgcatcctactctggcccaaaaccttccacacaatat
ggggctccaggcccctttgcagcccccagtgagggaggcaccctggcggccagtgggcgg
cctccactgctgcctacccgggcctcccgttcccagcgtgccgccagtgaggacatgacc
agtgacgaggagcgcatggtcatctgtgaggaggaaggggatgatgatgtcattgctgac
gatggcttcagcaccactgacattgacctcaagtgcaaggagcgggtgactgacagcgag
agcggagacagctctggggaagacccagagggcagcaagggctttggccggaaggtgttc
tcacctgtgatccgttcctcctttacccactgccgtccatctctggaccctgagccccca
gggcccccagatccacctgcagcctttggcaaaggatatgggcccaccccatcctcctcc
tcgtcctcgcctgcctcctcctcagcctcagcagccacctccttccaactgggctcaggg
accttcaaggcccaggagtcaggtcagggcagcacaacaggcccccttcggcccccaccc
cctggggctgggggcccagcgacaccttctaaggccacccggtttctccccacggatcct
gccaccttccggcgcaagagacctgaaagtgtagggggcctggatccaccaggcccctca
gtcattgcggcacctcccagtggtgggggaagtgtcctgcagacactggtcctgccctca
aacaaggaggaacgggaggccagtggagctcgcatgccttcggccccagccccaccgctg
gcctatggggccccagcagcacccctgtcccgcccggctgccaccatggtcaccaacgtg
gtccggcctgtcagcagcactcctgtgcccattgcctctaagcctttcccttcctctgcc
cgggcggaagtgtctccaaatgatacagctggtgccaggactgagacagtcactgggtcc
cgggcacctgggggctccccactaggtgtcagcttagtgtattcagataagaagtcggga
gcaaccacctcaacagccccacatctggtggctgggcccctactgggcactgtggggaag
gcacctgccactgtcaccaacttgctggtgggtaccccgggctatggggccccagcgccc
cccgctgtccagtttattgcccaggggggccctggcagtggggcagctgcgggctcagga
gcaggtgctgggagtggccctaatgggccagtgcccctgggcatcctgcagccaggtccc
ctgagcaaggctgggggaatcacccaagtgcagtacattctgcccacgctgccccaacaa
cttcaagtggcgcctgccccagcccctgggaccaaggcagtggctcccagcggccctgca
cccactaccagcatccgtttcaccctcccgccgggcacctccaccaacggcaaagtcctg
gctgccaccgcgcccactcctggcatccccatcctgcagtctgtaccctctgccccgccc
cccaaagcccagtcagtttctcctgtgcaggcccctcccccgggtggctcagcccagctg
ctacctgggaaggtactggtgcccttggccacccctagcatgtcagtgcggggtggaggg
gccggccagccactgcctctggtgagcccacccttctcagtacctgtgcagaacggtgct
cagccacccagcaagatcatccagctgactccggtgcctgtgagcacacccagcggcctg
gtgccgcccctcagcccagcctcgctccctggacccgcctctcagcctcagaaggtcctg
ctgccctcctctaccagaatcacctatgtgcagtcagccagcgggcatgcgctgcccctg
ggcaccagtcctgcgtctagtcaggctggaacagtcacttcgtacggacccacgagctcg
gtagccctaggcttcacctcattggggcccagtggccccgccttcgtgcagcccttgctt
tcaggccaagccccgctgctggctcccggccaggtgggcgtgtcgcctgtgcccagtccc
cagctgcctcccagctgcacagcccccagtggtcctgtcatcacagcgttttaccccggc
agccccgtccccacctcctcagcatccctggcccagccatctcaggctcccccaggccta
gtctacactgtggccaccagcaccaccccacctgctgccaccatcctgcccaagggccca
tcggcccctgccactgccaccccggcccctaccagccctttccctagtgccacagcaggc
tccatgacctacagcttagtggcccccaaagcccagcggcccacccctaaggccccccag
aaagtgaaggcggccatcgccagcattcctgtgggctcctttgaggcaggtgcccctggg
cggccaggccctgcaccccgtcagcccttggagcctggcccagcccgtgagccccctgca
tctgagtctgagctggaggggcagcctacaacgccggcccccccactgcccccagagacc
tgggttcccccagcccggaccagtcccccgccacccccacctgctgaggagcggaccagc
tccaaggggcctgagaccatggccagcaaattcccaagctcatcttcagactggcgcgtc
cctgggctgggtctggagaaccgtggggagcctcccacccctcccagcccggccccggct
ccagcctcagtccctggcagcagcagcggcagcagcgagggcagcagtgggagggcagct
ggggacacccctgagcgcaaggaggcggctagtaccggcaagaaggtgaaggtgcggccc
ccgcccctgaagaagacctttgactctgtggacaacagggtcctgtcggaggtggacttc
gaagagcgctttgctgagctgcccgagtttcggcctgaggaggtgctgccctcgcccacc
ctgcagtctctggccacctcaccccgggccatcctgggctcctaccgcaagaagagaaag
aactccactgacctggactctgcccctgaggaccccacctcgcccaagcgcaagatgagg
agacgctccagctgcagctcagagcccaacacccccaagagtgccaagtgcgagggggac
atcttcacctttgaccgtacaggtacagaagctgaggatgtgctcggggagctggaatat
gagaaagtgccatactcatcactacggcgcaccctggaccagcgccgggccctagtcatg
cagctcttccaggaccatggcttcttcccatcagcccaggccacagcagccttccaggcc
cgctacgcagacatcttcccctccaaggtctgtctgcagttgaagatccgtgaggttcgc
cagaagatcatgcaggcagccactcccacagagcagccccccggagctgaggccccctcc
ccggaccacccccccactggcactgctgctgcccctgtccccactcccagccctgctggg
ggccctgaccccacctcacctggctcggactctggcacgaccccggctgccccgccactg
cctccacccccagagccagggcctggacaacctggctgggaggggccccctcaaccctca
ccacccccttctggcccctccacagctgccacaggcaggtga
DBGET
integrated database retrieval system
