Vicugna pacos (alpaca): 102528304
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Entry
102528304 CDS
T08098
Symbol
SCARF1
Name
(RefSeq) LOW QUALITY PROTEIN: scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102528304 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vpc04131
]
102528304 (SCARF1)
Membrane trafficking [BR:
vpc04131
]
Endocytosis
Phagocytosis
Scavenger receptors
102528304 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
EGF_2
EGF_TEN
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
102528304
NCBI-ProteinID:
XP_015103497
UniProt:
A0A6J0AXN5
LinkDB
All DBs
Position
16
AA seq
725 aa
AA seq
DB search
MAARPSGLVSSGKALRGSREGVGSCRGQTNPSLPAILAAMGIGLLFPLLLLWTRGTQGSE
LDPSGQHVCMAGSPSVELQCCPGWRQKDRECTIPICEGPDACREDEVCVKPGLCRCKPGF
FGAQCNSRESPPGFRGARCELPCTPGRYGPQCRDSCGHCKQNEPCSADTGSCESCEPGWN
GTQCHQPCPPGTFGENCRQQCPHCRLGEACQPDTGQCQRCDPGWLGPRCEDPCPIGTFGE
GCGSTCLPCAQGACDAVTGECVCNAGYWGPSCNTSCPSGFHGNNCSVPCECPEGTCHPVS
GACQLGSHSQDAALIAGILVPLLLLLLAIACCACCCWAARLDPKDRPAGDGTALSRMKLQ
VWGALTSSLGSALPCGSLSSHKLPWVTVSHHDPEIPFNHSFIEPPSAGWASDDSFSSDPE
SGEEDEGPAYCVPPHEGMVPVAQAESPEASLAGGPFPPPEDASTPFAIPRTSSLARAKRP
SVSFAEGTKFAPQSRRSSGELSSPLRKPKRLSRGTQPGPENQEAEEPTSPEQTETDGAPP
GAASPRDSAIGRRRLPLAGRTVAERVEAIEGSVQEGSGSVTTIYMLAGTPQGSEGPVRSV
LRRFGSFQKGQAEPRVKSAIPKPPRRALSRNKGSPGLAPGSANLSPSSAPKEELPGTLES
AGTRPEEVARGLGDGTXSSERGQELAPGDGPLEQDPQKLTGEEGQEEPQYENVVPISGLP
EPRGP
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccgcccctccggcctggtttcctcaggaaaagccttgagaggaagcagggag
ggggttgggagctgtaggggccagactaacccaagccttcctgctatactggccgccatg
gggatcgggctgctgttccctctactgctgctctggactcgggggacccaggggtctgag
ctggaccccagtgggcagcacgtctgcatggctggcagcccctctgttgagctccagtgc
tgcccagggtggaggcagaaagatcgcgaatgcaccatccccatttgcgaggggccggac
gcctgtcgggaagacgaggtatgtgtgaaaccaggcctctgtcgatgcaaacctggattc
ttcggggcccagtgcaactctcgtgagtccccgcccggcttccgcggcgcgcgctgcgag
ctgccctgcaccccgggccgttacgggccgcagtgccgcgacagctgtggccactgcaag
cagaatgagccatgctctgcagacacaggcagctgtgagtcctgcgagccaggctggaat
gggacccagtgccaccagccctgccctcctggcacctttggcgagaactgcaggcagcag
tgcccccactgccggcttggggaggcctgtcagccagacactgggcagtgtcagcgctgt
gaccctggctggctggggcccaggtgtgaagacccctgcccgattggcacctttggggaa
ggctgtggctctacctgtctgccctgtgcccagggggcctgtgatgctgtgactggggag
tgtgtctgcaatgccggctactggggacccagctgcaacacttcgtgcccatctggcttc
catggaaacaactgctctgttccctgcgaatgccccgagggaacctgccacccggtctct
ggggcctgccagctgggatctcacagccaggatgccgccctcatcgcgggcatcctcgtg
cctctgctgctgctcctcctggccatcgcctgctgtgcctgctgctgctgggctgcccgg
ttggaccccaaggacaggccagcaggagatggaactgctctgtccaggatgaagctgcag
gtctggggggcactgacctccagcctgggctctgcgctgccctgcggttccctcagcagc
cacaagcttccctgggtgacagtctcgcaccacgacccggagatccccttcaaccacagc
ttcatcgagccgccctctgccggctgggcctcggatgactctttctcttctgatcctgag
tctggagaagaggacgagggtcctgcctactgcgtgccaccccatgaagggatggtccct
gtagcccaagcagagtcaccagaggccagcctggccggaggccccttccctcctcctgag
gacgcctccacaccattcgccatcccgcgcacatccagccttgcgcgggccaaacggccc
tcagtctcctttgctgaaggtaccaagtttgcaccacagagtcgccgaagctcaggggag
ctctccagcccactccgaaagcccaagaggctctcccgggggacccagccaggtcctgaa
aatcaggaggccgaggagcccacgagcccagagcaaacggaaacagacggcgctcctcct
ggtgctgccagccccagggattcagccattggccgccgccggctcccgcttgctggccgg
acagtggctgagcgtgtggaagccatcgagggcagtgtccaggagggctcaggctctgtg
accacgatctacatgctagcagggacaccgcagggatctgagggccccgtccggtctgtc
ctccgccgttttggtagcttccagaaaggccaggcagagcccagggtcaagagtgccatc
cctaagcctccacgcagggccctgagtcggaacaagggcagccccgggctggcccctggc
tctgccaatctgagccccagctcagccccgaaagaggagctgcctgggaccttagagtct
gcagggaccaggccagaggaagtggccagggggttgggggatggcaccnaaagctcagag
aggggccaggagctggcccctggggatggtcccctggaacaagatccccagaagctgact
ggcgaggaagggcaggaggagccccagtatgagaatgttgtacccatctctgggctacca
gagcccagaggaccttga
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