Vicugna pacos (alpaca): 102528345
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Entry
102528345 CDS
T08098
Symbol
U2SURP
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102528345 (U2SURP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vpc03041
]
102528345 (U2SURP)
Spliceosome [BR:
vpc03041
]
Complex A
U2 snRNP components
U2 related factors
102528345 (U2SURP)
Complex B
102528345 (U2SURP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
SET_assoc
RRM_7
Motif
Other DBs
NCBI-GeneID:
102528345
NCBI-ProteinID:
XP_006202838
UniProt:
A0A6I9I6G4
LinkDB
All DBs
Position
1
AA seq
1029 aa
AA seq
DB search
MADKTPGGSQKASSKTRSSDVHSSGSSDAHMDASGPSDSDMPSRTRPKSPRKHNYRNESA
RESLCDSPHQNLSKPLLENKLKAFSIGKMSTAKRTLSKKEQEELKKKEDEKAAAEIYEEF
LAAFEGSDGNKVKTFVRGGVVNAAKEEHETDEKRGKIYKPSSRFADQKNPPNQSSNERPP
SLLVIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDG
QRRSMDAPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPL
ASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPP
HPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKEDFEKTLSQAIVKVV
IPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSI
LQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEEPSKKGALKEEQRD
KLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSD
VLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDW
AIYPEPFLIKLQNIFLGLVNIIEEKEAEDVPDDLDGAPIEEELDGAPLEDVDGIPIDATP
IDDLDGVPIKNLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWE
LFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPIKEEMTESKFSKYSEMSEEK
RAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERERDKK
DKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSPSPKSERSERSERS
HKESSRSRSSHKDSPRDVSKKAKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRS
HKKSKKNKH
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaaacgccaggcggctctcagaaggccagttcaaagaccagatcatcagat
gttcattcgtctggatcttcagatgcacatatggacgcgtctggaccctcggatagtgat
atgccaagtcggacgcgacctaagagcccaagaaaacataattataggaatgagagtgcc
cgtgaaagcctttgtgattctcctcatcagaatctctcaaaacctcttctggaaaacaaa
cttaaagcattcagtattggaaaaatgagtacagctaagcgaactttaagtaagaaggag
caagaagaattaaagaagaaggaggatgaaaaggcagctgctgagatttatgaggaattt
cttgctgcttttgaaggaagtgatggtaataaagtgaaaacgtttgtgcgtggaggtgtt
gttaatgcagctaaagaagaacatgagacagatgaaaaaagaggtaaaatctataagcca
tcttcaagatttgccgatcaaaaaaatcctccaaatcagtcatccaatgaaagaccacca
tctctacttgtgatagaaaccaaaaaacctccactgaagaaaggggagaaagaaaagaaa
aaaagcaatttggaactcttcaaagaagaattgaaacaaattcaagaagagcgtgatgag
agacataaaacgaaaggcaggttaagtcggtttgagccacctcagtcagattctgatggt
cagcgtcgttctatggacgcaccttcaagaagaaatagatcatctggtgttcttgatgat
tatgcacctggctcgcatgatgtaggagatccaagcactactaatttgtaccttggaaac
attaatccacagatgaatgaagaaatgttgtgtcaagaatttgggagatttggaccatta
gccagtgtgaaaattatgtggcctagaactgatgaagaaagggcaagagagagaaattgt
ggctttgtggcctttatgaatagaagagatgctgaaagagctttaaaaaatttaaatgga
aagatgattatgtcttttgaaatgaagttaggttggggtaaagctgtgcctattcctcca
catccaatatacattccgccttctatgatggaacatacacttcccccacctccatcagga
ctgccttttaatgcgcagcctagagagcggttaaaaaaccccaatgctcccatgttacca
ccacctaaaaacaaggaggattttgagaagactctgtcgcaagccatagtcaaagtggtt
atcccaacagaaaggaatttgctcgccctaatacatcgaatgatagagtttgttgtacgt
gaagggccaatgtttgaagctatgattatgaacagagagatcaacaatcctatgttcaga
ttcttatttgaaaaccagacaccagcccatgtttactataggtggaaactttattccatt
ctgcagggagattcaccaactaagtggcggacggaagattttcgtatgttcaaaaatgga
tctttttggaggccgccaccattaaatccgtacctgcatgggatgtcagaagagcaagaa
acagaagcttttgtagaagagcctagtaaaaagggagcacttaaagaagaacagagggat
aaattagaagaaattctgcgggggttaactccaaggaaaaatgatattggagatgcaatg
gttttctgtcttaataatgctgaagctgctgaagaaatagtggattgcatcactgagtca
ttgtccatcttaaagacaccccttcccaaaaagattgccagattatatttggtttctgat
gttttatacaactcttcagccaaagttgccaatgcttcctattacagaaaattttttgaa
acaaagttatgtcagatattttcagacctcaatgctacgtatcgtacaattcaaggccat
ttacagtctgaaaactttaagcaacgggtaatgacctgctttagagcatgggaagattgg
gcaatttatccagaaccatttttgatcaaactacaaaatattttcttaggacttgtaaat
attattgaagaaaaggaagcagaggatgtgccagatgaccttgacggtgcccccattgag
gaggagcttgacggtgcacctctagaagatgtagatggaattcctattgatgctactccc
attgatgatctcgatggagtccctatcaagaaccttgatgatgatcttgatggagtgcct
ttggatgcaactgaagactctaagaagaatgaacctatatttaaagttgctccatcaaaa
tgggaagctgtagatgaatctgaattggaagcacaggctgtaacaacttctaaatgggaa
ttatttgaccagcatgaagaatcagaagaagaagaaaatcaaaatcaagaagaagaaagt
gaggatgaagaagacactcaaagttccaaatctgaagaacatcatttgtactctaatcca
atcaaagaagaaatgactgagtccaaattctctaagtactctgaaatgagtgaagaaaaa
cgagctaaactccgtgaaattgagctcaaagttatgaagtttcaggatgaattggaatct
ggaaaaagacctaaaaaaccgggccagagctttcaggaacaagtagaacactacagagat
aaacttctccaacgagagaaagagaaagaattagaaagagaacgagaaagagacaagaag
gataaagaaaaattggaatctcgatccaaagataagaaggagaaagatgagtgcactcca
acaaggaaagagaggaaaaggcgacacagtacatcccctagcccatctcgcagtagcagt
ggtagacgagtgaaatccccatcaccaaaatcggagcgatcagagcgttcagaaagatct
cataaagagagctcacggtccaggtcatctcacaaagattctcctagagatgttagcaaa
aaggccaaaaggtcaccgtctggttcaaggacacctaaaaggtctaggcgatcacggtct
agatcccccaaaaaatcagggaagaaatccagatcccagtcccgatctccacacaggtct
cataaaaagtcaaagaaaaacaaacactga
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