Vicugna pacos (alpaca): 102528366
Help
Entry
102528366 CDS
T08098
Symbol
PARPBP
Name
(RefSeq) PCNA-interacting partner isoform X1
KO
K27412
PCNA-interacting partner
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpc03400
]
102528366 (PARPBP)
DNA repair and recombination proteins [BR:
vpc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
102528366 (PARPBP)
TLS (translesion DNA synthesis) factors
Other TLS factors
102528366 (PARPBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD_C
Motif
Other DBs
NCBI-GeneID:
102528366
NCBI-ProteinID:
XP_006205963
UniProt:
A0A6I9IB19
LinkDB
All DBs
Position
12
AA seq
579 aa
AA seq
DB search
MAVLNQKSVMHMIREFRRNWHTLCNSERTTVCGADSMLLALQLSMAENNKQHSGEFTVSL
SDVLLTWKYLLHEKLNLPVENMEVIDHYEDIRRIYDDFLKNSNMLDLIDVYKKCGILTSN
YENYANISPSQLRDFLCGRQYAVDDETDFCVPTSPMSKHNQDNEKVRLLAKKIIYSYLNL
LVNSKNDLALAHILNIPDRGLGREAFTALKHAAREKQMSIFLVATSFIRTLELGGKGYAP
SPSDPLRTHIKGLSHFINFIDKLDEILGEIPNPSIAGGRILSVIKMQLIKGQNSRDPFYK
AVEEVAQDLDLRIKHITNSQQGDVAVSTTDSSPARPKSHAINHGTAYCGRDTVKTLLVLL
DEEAASAPTKNKAELLYDDENTIHHNGTSILTLFRSPTQVNNSSVKPLRERIHKSMQEKK
IKVKQMLIRSQFACTYKDDCMISKDKWNNVNTASKALRVLHMENDLSEGTDSSVGRPTIG
ASSGNVHLDKSKNEVARKSSSQTGNKNSKRKQVDLDDENTLCDNGNEPLQHKNVKIPKTS
KDLLSKLDGKLVRVAKSNKCTTNDKLITGQTKLTQFFRL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgcttaaccagaagtctgttatgcatatgattagagagttcagaaggaattgg
catactctttgtaactctgagaggactactgtgtgtggtgcagactccatgctcttggca
ttgcagctttccatggcagagaacaacaaacagcacagtggagaatttacagtctctctc
agcgatgtcttattgacctggaaatatttgttacatgagaaattgaacttaccagttgaa
aatatggaagtgattgaccattatgaggacattaggaggatttatgatgatttcttgaag
aatagtaacatgttagatctgatcgatgtttataaaaaatgtggcattttgacttctaat
tatgaaaattatgccaatatatctcctagtcaactacgggattttctgtgtggcagacaa
tatgcagtagatgatgaaactgatttctgtgtaccaacatcaccaatgagtaaacacaac
caggataatgaaaaggtgcggttactagcaaagaaaattatctactcgtatttaaacctg
ctggtgaattcaaagaatgacttggctctggctcatattctcaatattcctgatagagga
cttggaagagaagccttcactgctttgaaacatgctgctcgagagaaacagatgtctatc
tttttggtggccacatcatttattagaacattagagcttggagggaaaggatatgcacca
tcaccatctgatcctttaaggacacatataaaaggattgtctcattttattaatttcatt
gacaaattagatgaaattcttggagaaataccaaatccaagcattgcagggggtcgaata
ctctcagtgataaagatgcagctgattaaaggtcagaacagcagggatcctttttataag
gcagtagaggaagttgctcaagatttggatttgaggattaaacatattaccaattctcaa
caaggagatgtagctgttagtaccactgacagcagtcctgcacggccaaaatctcatgcc
ataaaccatggcactgcatactgtggcagagatactgtgaaaactttattagttctgttg
gatgaagaagcagccagtgctcctaccaaaaacaaagcagagcttttatatgatgatgaa
aatacaattcatcataatggaacttctattcttacactttttagatctcccacacaagtg
aataattcatcggtgaaacccctaagagaacgcatccataagtcaatgcaagagaaaaaa
attaaggtgaagcaaatgttaattagatctcagtttgcttgtacttacaaagatgactgc
atgataagcaaggataaatggaataatgttaatacagcatcaaaggctttgcgtgttctt
cacatggaaaatgacctttctgaaggtacagattcatctgttggaagaccaacaattgga
gcaagttctggaaatgttcatctggacaaaagtaaaaatgaagtagcaagaaaatcaagt
agtcagactggaaataaaaactcaaaaaggaaacaggtggatctggatgatgaaaatact
ctctgtgataatggaaacgaaccacttcaacataaaaatgttaagatacctaagacatca
aaagatttgctaagtaaattggatggcaaactagtcagagtagcaaaaagcaacaagtgt
accaccaacgacaaattgattactggccagacaaagttaactcagttttttagactatga
DBGET
integrated database retrieval system
