Vicugna pacos (alpaca): 102528738
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Entry
102528738 CDS
T08098
Symbol
MSH4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vpc03036
]
102528738 (MSH4)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Meiosis-specific proteins
Others
102528738 (MSH4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND3
ATPase_2
AAA_21
Motif
Other DBs
NCBI-GeneID:
102528738
NCBI-ProteinID:
XP_006217177
UniProt:
A0A6I9IMQ2
LinkDB
All DBs
Position
13
AA seq
929 aa
AA seq
DB search
MLRPEMSPPSPSASALAEARSQGPRCNLGLQETPQSRPSAQPSGSTPPGTSGAAGDRSSS
SSLPQHPPGARPAQGSYFKNKRSHAENTFASNFTLGTSSSSVRDSNYPQILKTPLSAGNP
QKSGYKSWTPQMGYSATSSSAVSAHSPSVIVAVVEGRGFARGEIGMASIDLKSPQIILSQ
FADNTTYAKVITKLKILSPLEIIMSNTACVVGNSTKLFTLITENFKNVNFTTIQRKYFNE
TKGLEYIEQLCIAEFSTVLMEVQSKYYCLAAVAALLKYVEFIQNSVYAPKSLKICFQGSE
QTAMIDSSSAQNLELLINNQDSRSNHTLFGVLNYTKTPGGSRRLRSNILEPLVDVETINM
RLDCVQELLQDEELFFGLQSVIARFLDTEQLLSVLVQIPKQDTVNAAESKITNLIYLKHT
LELVDPLKIALKNCNTPLLRAYCGSLEDKRFGIILDKIKTVINDDARYMKGCLNMRTQKC
YAVRSNINEFLDIARRTYTEIVDDIAGMISQLAEKYSLPLRTSFSSARGFFIQMTTDCTA
LPNDQLPSEFIKISKVKNSYSFTSADLIKMNERCQESLREIYHMTYMIVCKLLSEIYEHI
HCLYKLSDTVSMLDMLLSFAHACTLSDYVRPEFTDTLAIKQGWHPILEKISVEKPVANNT
YITEGSNFLIITGPNMSGKSTYLKQIALCQIMAQIGSYVPAEYSSFRITEQIFTRISTDD
DIETNSSTFMKEMKEIAYILHNANDKSLILIDELGRGTNTEEGIGICYAVCEYLLRLKAF
TLFATHFLELCHIDVLYPNVENMYFEVQHVKNTSRNKEAILYTYKLSKGLTEEKNYGLKA
AEVSSLPPSIVLDAKEITTQITRQILQNQRSTPEMERQRAVYHLATRLVQAARNSQLDPD
SLRTYLSNLKKKYEADFPRSEQVSGETEE
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggcctgagatgtcaccaccctcgccttccgcctctgcattggcggaggctcgg
tcacagggtccccgctgcaacttaggactccaggagacgccccagagccgcccttcagcc
cagccgtctgggtccacgcctccaggcacgtcgggagccgcgggcgaccggagcagcagc
agcagtctccctcagcacccgccaggcgcccggcccgctcaaggttcatactttaaaaac
aagagatctcatgcagaaaacacatttgcatcaaattttacacttgggacaagctcatcc
tctgtgcgagatagtaattatcctcaaatactaaaaactccattgtctgctggaaatcct
cagaaatcaggttataaaagttggacaccgcaaatgggatattcagctacatcctcatct
gcagtttctgcgcactctccatcagttattgtagctgttgtagaagggagagggtttgcc
agaggtgaaataggaatggcaagtattgatttaaaaagcccacaaattatattgtctcag
tttgcagacaacacaacatatgccaaggtgatcacaaaactcaaaattttgtcacctttg
gaaataataatgtcaaatactgcttgtgttgtggggaattcaacaaagttgtttactctg
atcacagaaaatttcaagaatgttaatttcactactatccaaaggaaatacttcaatgaa
acaaaaggattagagtacattgaacagttatgtatagcagaattcagtactgtcctaatg
gaggttcagtccaagtattactgccttgcagccgttgcagctttattaaaatatgttgaa
tttattcaaaattcagtttatgcaccaaaatcactgaagatttgtttccagggtagtgaa
cagacagccatgatagattcatcatcagcccaaaaccttgaattactaattaataatcaa
gacagtaggagtaatcacacactctttggtgttctaaattatactaagactcctggagga
agtagaagacttcgttctaatatattagaacctctagttgatgttgaaaccattaacatg
agattagattgtgttcaagaactgcttcaagatgaagaactcttttttggacttcagtca
gttatagcaagatttcttgatacagagcagcttctttctgttttagtccaaattccaaag
caagacacggttaatgcagctgaatcaaagataacaaatttaatatacctaaaacacacc
ttggaacttgtggatcccttaaagattgctctgaagaactgtaacacacctttattaaga
gcttactgtggttccttggaagataagaggtttggaattatacttgacaagattaaaaca
gtaattaatgatgatgcgaggtacatgaaaggatgcctgaacatgaggactcagaagtgc
tatgcagtgaggtctaacataaatgaatttcttgacatagctagaagaacatatacggag
attgtagatgacattgcaggaatgatatcacagcttgcagaaaaatacagtcttcctttg
aggacaagttttagctcagcgcgagggtttttcatccagatgactacagattgtacagcc
ctacccaatgatcaacttccttcagagtttattaagatatctaaagtgaaaaattcttac
agctttacatcagcagatttaattaaaatgaatgaaagatgccaagagtctttgagagaa
atttatcacatgacttatatgatagtatgcaaactgcttagtgagatttatgaacatatt
cattgcttatataaactatctgacactgtgtcaatgctggatatgctgctgtcatttgct
catgcctgcactctttctgactatgttcggccagagttcactgatactttagcaatcaaa
cagggatggcatcccattcttgaaaaaatatccgtggaaaaacctgttgccaacaatacc
tatattacagaagggagtaattttttaatcataactggaccaaatatgagtgggaaatcc
acatatttgaaacagattgccctttgtcagattatggcccagattggatcatatgttcca
gcagaatattcttcctttagaattactgaacagatttttacaagaatcagcactgatgat
gatattgaaacaaattcatcaacatttatgaaggaaatgaaagagatagcatatattcta
cataatgctaatgacaaatcacttatattaattgatgaacttggcagaggtactaataca
gaagaaggtattggcatttgttacgctgtttgtgaatatctgctgagattaaaggcattt
acactgtttgctacacatttcctggaattatgccatatagatgttctgtatcccaatgta
gaaaacatgtattttgaagttcaacatgtaaagaacacctcaagaaataaagaagcaatc
ttgtatacctacaaactttctaagggactcacagaagaaaaaaattatggattaaaagct
gcagaggtatcatcactcccaccatcaattgttttggatgccaaagaaatcacaactcaa
attactagacaaattttgcaaaaccaaaggagtacccctgagatggaaagacagagagct
gtgtaccatctagctactaggcttgttcaagctgctcgaaactctcagttggatccagac
agtttacgaacatatttaagtaacctcaaaaagaagtatgaagcagattttcccaggtct
gaacaagtttcaggggagactgaagaataa
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