Vicugna pacos (alpaca): 102528816
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Entry
102528816 CDS
T08098
Symbol
PRPF8
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102528816 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vpc03041
]
102528816 (PRPF8)
Spliceosome [BR:
vpc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
102528816 (PRPF8)
Complex C
U5 SnRNP specific factors
102528816 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
102528816
NCBI-ProteinID:
XP_031541729
UniProt:
A0A6J3B6D6
LinkDB
All DBs
Position
16
AA seq
2301 aa
AA seq
DB search
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTVGPCPFSFLGRHSKGVAKTVTKQRVESHFDLELRAAVMHDIL
DMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTA
HYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTV
HWLESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNP
HEALSRIKRHLLTQRAFKEVGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRR
LFPPWIKPADTEPPPLLVYKWCQGINNLQDVWETSEGECNVMLESRFEKMYEKIDLTLLN
RLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLG
LHRASEMAGPPQMPNDFLSFQDIATEAAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYL
TEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSF
VSVYSKDNPNLLFNMCGFECRILPKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDD
ESMQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENK
IQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFR
SGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDR
GIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDM
IQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRF
TLWWSPTINRANVYVGFQVQLDLXGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLC
QVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDS
TTTQKYWIDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSA
YGNWFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSN
QIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLG
QLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQ
ACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVIL
KPDKTTITEPHHIWPTLTDEEWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGM
EISAPSQQRQQIAEIEKQTKEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWR
VRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGVSPP
DNPQVKEIRCIVMVPQWGTHQTVHLPGQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVT
THAKIMADNPSWDGEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPS
HYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHF
LNFALLQEGEVYSADREDLYA
NT seq
6906 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtatttccttaccgagggccgggtaacccggtgcccggccctttagccccg
ctgccagactacatgtcggaggagaagctgcaggagaaagcccgaaaatggcagcagttg
caggccaagcgttatgcggaaaagcggaagtttgggtttgtggacgctcagaaggaagac
atgcctccagaacatgtcaggaagattattcgagaccatggagacatgaccaacaggaag
tttcgccacgacaaaagggtctacctgggtgccctgaagtacatgccccatgctgtcctc
aaactcctggaaaacatgcctatgccttgggagcagattcgagatgtgcctgtgttgtac
cacatcactggagccatttcctttgtcaatgagattccctgggtcattgagcctgtctac
atctcccagtgggggtcaatgtggattatgatgcgtcgagaaaaaagagacaggcggcat
ttcaagaggatgcgttttcccccttttgatgatgaggagccgcctttggactatgctgac
aacatcctagatgttgagccgctggaggccattcagctagagctggaccctgaggaggat
gcccctgtgttggactggttctatgaccaccagcctttgagagacagccgaaaatacgtg
aatggctccacttaccagcgctggcagttcacgctgcccatgatgtccactctctaccgc
ttggccaatcagctcctaacagacttggtagatgacaactacttctatctgtttgatctg
aaggccttttttacctcgaaggcactcaatatggccatccctggaggccccaaatttgaa
cctcttgtccgagacatcaacctacaggatgaagactggaatgaattcaatgatattaac
aagatcatcatccggcagcctatccgtactgagtacaagattgcttttccttacttatac
aacaaccttccacatcatgtccacctcacttggtaccacactcctaatgttgtgttcatc
aaaactgaggatcctgatttgccagctttctactttgatcctttgatcaacccaatttcc
catagacactctgtcaagagccaagaaccattgccagatgatgatgaagagtttgagctc
cccgagtttgtggagcccttcttaaaggatacacccctctacacagacaatacagccaat
ggcatcgccctgctctgggccccacgacccttcaacctacgctctggtcgcacccgccgg
gccctagacatcccccttgtcaagaactggtatcgggagcattgtcctgctgggcagccc
gtgaaagtgagggtctcctaccagaagctgcttaagtactatgtgctgaatgccctgaag
caccggccccctaaagcccagaagaagcggtatctgttccgctcctttaaagccactaaa
ttctttcagtctacaaagcttgactgggtggaagtggggctacaggtttgccgccagggc
tacaacatgctcaaccttctcattcaccgcaaaaatctcaactacctgcacctggattac
aacttcaacctgaagcctgtcaagacgctcaccaccaaggaaagaaagaaatctcgtttt
gggaatgctttccatctgtgtcgggaagttctgcgtttaactaagctggtggtggacagt
catgtgcagtatcgattgggcaatgtggatgccttccagctggcagatggattgcagtat
atctttgcccatgtggggcagctgacgggcatgtaccgatataaatacaagctgatgcgg
cagattcgcatgtgcaaggacctgaagcatctcatctattaccgcttcaatacggtagga
ccctgccctttttcatttctaggccgacactcgaagggggtggcaaagactgtaacaaag
cagcgagtggagtctcattttgacctggaacttcgggcagctgtgatgcatgacattctg
gacatgatgcctgaggggatcaaacagaacaaggcccggacaatcctgcagcacctcagt
gaagcttggcgctgctggaaggccaacattccctggaaggtccctgggctgccaacacct
atagagaacatgatccttcgatacgtgaaggccaaggctgactggtggaccaacactgct
cactacaaccgagaacggatccgccgtggggccactgtagacaagactgtgtgtaaaaag
aacctgggccgcctcactcggctctacctgaaggccgaacaggagcggcagcacaactac
ctgaaggacggtccttacatcacagcagaggaggcggtggcagtgtataccaccactgtg
cattggttggaaagccgtaggttctcacccatcccattccccccactctcctacaagcat
gacaccaagttgctcatcttggccttggagcggctcaaggaagcttacagtgtgaagtcg
cggttaaaccagtctcagagagaggagttaggtctgatcgagcaagcctatgacaacccc
catgaggcgctgtcccgcatcaagcgtcaccttctcactcagagagcctttaaagaagtc
ggcattgagttcatggatctctatagccacctggtgccagtgtacgatgtggagccactg
gagaagataactgatgcctacctggaccagtacctgtggtatgaagctgacaagcgccgc
ctcttcccaccctggatcaagcctgctgacacagaaccgccgcctctgcttgtttacaag
tggtgtcaaggcattaataacctgcaggacgtgtgggagacaagtgagggcgagtgtaac
gtcatgctggagtcccgatttgagaagatgtatgagaagatcgacttgaccctgcttaat
cggctgctgcgcctcatcgtggaccacaacatagctgactacatgacagccaagaacaac
gtcgtcatcaactataaggacatgaaccatacgaattcatatgggatcatcagaggcctg
cagtttgcctcattcattgtgcagtactacggcctggtgatggatttacttgtgttggga
ttgcaccgggccagtgagatggctgggccccctcagatgccaaacgattttctcagtttc
caagacatagccaccgaggctgcccatcccatccgtctcttctgcagatacatcgatcgt
atccatattttcttcaggttcacagcagatgaggctcgggacctgatccagcgttacctg
acagagcaccctgaccccaacaatgaaaacatcgttggctataataataagaagtgctgg
ccccgagacgcccgcatgcgcctcatgaagcatgacgtcaacttgggtcgggcagtgttc
tgggacatcaagaaccgtctgccacgctcagtgactacagttcagtgggagaacagcttt
gtgtctgtgtacagtaaagacaaccccaacctgctgtttaacatgtgtggttttgagtgc
cgcatcctgcctaagtgccgcaccagctatgaggagttcacccacaaggatggggtgtgg
aacctacagaatgaggttactaaggagcggacagctcagtgtttcctccgtgtggatgat
gagtcaatgcagcgcttccacaaccgtgtgcgtcaaattctgatggcctctggctccacc
accttcaccaagattgtgaataagtggaacacagctcttattggccttatgacatacttt
cgagaggctgtggtgaacacccaggagctcctggacttgctggtgaagtgtgagaacaaa
atccagacacggatcaagattggcctcaactccaagatgccgagtcggttcccccctgtt
gtgttctacacccctaaggagttgggtggacttggcatgctctcaatgggacatgtgctc
atcccccagtctgacctcaggtggtccaagcagacagatgtaggtatcacacatttccgt
tcaggaatgagccatgaagaagaccagctgattcccaacttgtatcgctacatacagcca
tgggagagcgagttcattgattctcagcgggtctgggctgagtatgcactcaagagacaa
gaggccattgctcagaacagacgactaactttagaagatctggaagattcgtgggatcgt
ggcattcctcgaatcaataccctcttccagaaagaccggcacacattggcttatgataag
ggttggcgtgttcgaactgactttaagcagtaccaggttttgaagcagaatcctttttgg
tggacacaccagcgtcatgatgggaagctctggaacctgaacaattaccgtacagacatg
atccaggccctgggtggtgtggaaggcattctggaacacacactcttcaagggcacttac
ttccctacctgggaggggcttttctgggagaaggccagtggttttgaggagtctatgaag
tggaagaagctgaccaatgctcagcgatcaggattgaaccagattcccaatcgtagattc
accctctggtggtctccaaccatcaatcgcgccaatgtttacgtaggctttcaggtgcag
ctggacctgnacggtatctttatgcacggcaagatccccacactaaagatctctctcatc
cagatcttccgagctcacttgtggcagaagatccacgagagcatcgttatggacttgtgt
caggtgtttgatcaggaactggatgcactggaaattgagacagtacaaaaggagacaatc
cacccccgaaagtcctataagatgaactcttcttgtgcagatatcctgctctttgcctcc
tataagtggaatgtctcccggccctcattgctagcagactccaaggatgtgatggatagc
accaccactcagaagtattggattgacatccagttgcgctggggagactatgattcccat
gacattgagcgctacgcccgagccaagttcttggactacaccacggacaacatgagtatc
tatccttcacccacgggtgtgctcattgctattgacctggcctataacctgcatagtgcc
tatggaaactggtttcctggcagcaagcctctcatacagcaggccatggccaagatcatg
aaggcaaaccctgccttgtatgtgttacgtgaacggatccgtaagggtctgcagctgtat
tcatctgagcctactgagccttatctatcctctcagaactatggtgagctcttctccaac
cagattatctggtttgtggatgacactaatgtctacagagtaactatccataagaccttt
gaagggaacttgaccaccaagcccatcaatggggccatcttcatcttcaacccacgcaca
gggcagctgttcctcaaaataattcacacatctgtgtgggctggacagaagcgtttgggg
cagttggcaaagtggaagacagctgaggaagtggctgctctgattcgatctctgccagtg
gaggagcagcccaagcagatcattgtcaccaggaagggcatgttggatccattggaggtg
cacttgttagacttccccaatattgtgatcaaaggatcagagctccagctccccttccag
gcttgtctcaaggtggaaaagtttggggatctcatccttaaagctactgagccccagatg
gttctctttaacctctacgatgactggctcaagactatctcctcttacacggctttctcc
cgcctcatcctgattctgcgtgccctgcatgtgaacaatgaccgggcaaaagtgatcctg
aagccagacaagaccacgatcacagaaccacaccacatctggcccactctgactgatgag
gagtggatcaaggtggaagtgcagctcaaggaccttatcttggccgactacggcaagaaa
aacaatgtgaatgtggcgtcactgacacaatcagaaattcgagacatcatcctgggtatg
gagatctcagcaccgtcacagcagcggcagcagatagctgagattgagaagcagaccaag
gaacagtctcagctgactgcaacgcagactcgtactgtcaacaagcatggtgacgagatc
atcacctctaccaccagcaactatgagacccagactttctcatctaagactgaatggagg
gtcagggccatctctgctgccaacttgcacctaaggaccaatcacatctatgtttcatct
gatgacatcaaggagactggttatacctatatccttcccaagaatgtgcttaagaagttt
atctgcatatctgaccttcgggcccaaattgcagggtacctgtatggggtgagcccacca
gataacccccaggtgaaggagatccgctgcattgtgatggtaccgcagtggggtactcac
cagactgtgcacctgcctggccagctgccccagcatgagtacctcaaggagatggaacct
ttaggttggatccacactcagcccaacgagtccccccagctgtcaccccaggatgtcacc
acccatgccaagatcatggctgacaacccatcttgggatggcgagaagaccattatcatc
acctgcagcttcacaccaggctcctgcaccctgacagcctacaagctgacccccagtggc
tatgaatggggccgccagaacacagacaagggcaacaatcccaagggctacctaccctca
cactacgagagggtccagatgctcctgtcagaccgcttcctcggcttctttatggttcct
gctcaatcctcgtggaactacaactttatgggtgtccggcatgatcccaacatgaagtat
gagctgcaactggcaaaccccaaagagttctaccacgaggtgcaccgaccctcccacttc
ctcaactttgctctcctgcaggagggcgaggtctactctgccgaccgagaggatctctat
gcgtag
DBGET
integrated database retrieval system
