Vicugna pacos (alpaca): 102528862 Help Entry 102528862         CDS       T08098                                  Symbol COL2A1 Name (RefSeq) collagen alpha-1(II) chain   KO K19719   collagen type II alpha Organism vpc  Vicugna pacos (alpaca) Pathway vpc04151   PI3K-Akt signaling pathway vpc04510   Focal adhesion vpc04512   ECM-receptor interaction vpc04518   Integrin signaling vpc04974   Protein digestion and absorption vpc05165   Human papillomavirus infection Brite KEGG Orthology (KO) [BR:vpc00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     102528862 (COL2A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     102528862 (COL2A1)    04518 Integrin signaling     102528862 (COL2A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     102528862 (COL2A1)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     102528862 (COL2A1)  09160 Human Diseases   09172 Infectious disease: viral    05165 Human papillomavirus infection     102528862 (COL2A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:vpc00536]     102528862 (COL2A1) Glycosaminoglycan binding proteins [BR:vpc00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    102528862 (COL2A1) SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC VWC2L_2nd Motif Other DBs NCBI-GeneID:  102528862 NCBI-ProteinID:  XP_006202962 UniProt:  A0A6I9I6P2 LinkDB All DBs Position 12 AA seq 1487 aa AA seqDB search MIRLGAPQTLVLLTLLVAAVLRCHGQDVQKAGSCVQDGQRYNDKDVWKPEPCRICVCDTG TVLCDDIICEDMKDCLSPETPFGECCPICSTDLPTASGQPGPKGQKGEPGDIKDIVGPKG PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG PRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVG PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGADGIPGAKG SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQG APGPAGEEGKRGARGEPGGAGPAGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG VMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPG PSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGSQGLQGPRG LPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPG KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGTAGARGAPGERGETGPPGPAGFAGPPG ADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPG DDGPSGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG PVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGEAGPVGAPGTPGPPGSPGPAG PTGKQGDRGEAGAQGPMGPAGPAGARGMPGPQGPRGDKGEAGEAGERGLKGHRGFTGLQG LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAG PPGNPGPPGPPGPPGPGIDMSAFAGLGQREKGPDPLQYMRADEAAGNLRQHDAEVDATLK SLNNQIESLRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG ETCVYPNPASVPKKNWWSSKSKDRKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRL LSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCTK HTGKWGQTLIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL NT seq 4464 nt NT seq  +upstreamnt  +downstreamnt atgatccgcctcggggctccccagacgctggtgctgctgacgctgctcgtcgccgctgtc cttcggtgtcatggccaggatgtccagaaggctggcagctgtgtgcaggacgggcagagg tataatgataaggatgtgtggaagcccgagccctgccggatctgtgtctgtgacactggg actgtcctctgcgacgacataatctgtgaagacatgaaagactgcctcagccccgagacc cccttcggagagtgctgccccatctgctcaactgacctccccactgccagtgggcaacca ggaccaaagggacagaaaggagaacctggagacatcaaggatattgtaggacctaaagga cctccagggcctcagggacctgcaggtgaacaaggaccccgaggtgatcgtggtgacaaa ggtgaaaaaggtgctcctggacctcgtggcagagatggagagcctgggactcctggaaat cctggcccccccggtcctcctggcccccctggcccccctggccttggtggaaactttgct gcccaaatggctggaggatttgatgagaaggctggtggtgcccagatgggagtaatgcag ggaccaatgggccccatgggacctcgcggacctccaggccctgctggtgctcccggacct caaggatttcaaggcaaccctggtgaacctggggaacctggcgtgtctggtcccatgggt ccccgtggtcctcctgggccccctggaaaacctggtgatgatggtgaagctggaaagcct ggaaaagccggtgagagaggccctcctggccctcagggtgctcgcggcttcccaggaacc ccaggccttcctggtgtcaaaggtcaccgaggttacccaggtctagatggtgctaaggga gaagctggtgctccaggtgtaaagggtgagagtggttccccaggagagaatggttctcca ggcccaatgggtccccgcggccttcctggtgagagaggacggactggccctgctggcgct gcgggtgcccgtggcaacgacggtcaaccaggccccgcagggcctccgggtcccgtgggt cctgctggcggtcctggcttccctggagctcccggtgccaagggtgaagctggtcctact ggtgctagaggtcctgaaggtgcccagggtcctcgcggtgaacctggcactcctgggtcc cccgggccggctggtgcctctggtaaccccggagctgatggaattcctggagctaaagga tctgctggtgctcctggcattgctggtgctcctggcttccctgggccccgtggtccaccc ggccctcaaggtgcaactggtcctctgggcccgaaaggtcaaacgggtgagcccggtatt gctggcttcaaaggtgaacaaggccccaagggagaaccgggccctgctggtccccaagga gcccccggtcctgctggtgaagaaggcaaaagaggtgcccgtggagagcctggtggtgct gggcccgctgggccccctggagaaagaggtgctcctggcaaccgtggtttcccaggtcaa gatggtctggcaggtcccaagggagcccctggagagcgaggacccagtggccttgctggt ccaaagggagccaatggtgaccctggccgtcccggagagcctggccttcctggagccagg ggtctcactggtcgccctggtgatgctggtcctcaaggcaaagttggtccttctggagcc cctggtgaagacggtcgccctggacctccaggtcctcagggggctcgtgggcagcctggt gtcatgggtttccctggtcccaaaggtgccaatggtgagcctggcaaagctggcgagaag ggactgcctggtgctcctggtctgagaggtcttcccggcaaagatggtgagacaggtgct gcaggcccccctggacccgctggacctgctggtgaacgaggcgagcagggtgctcctggg ccatctgggttccagggacttcctggccctcctggtcccccaggtgaaggtggaaaacca ggtgaccagggtgttcctggtgaagctggagctcccggcctcgtgggccccaggggtgaa cgaggcttcccaggggaacgtggctctcccgggtcccagggcctccaggggccccgcggc ctccccggcactcctggcactgatggtcccaaaggtgcatctggcccagccggcccccct ggggctcagggccctccaggtctgcaggggatgcccggtgagaggggagcagctggcatt gccgggcccaagggagacaggggcgatgttggtgagaaaggccctgagggagcccccggg aaggacggcggacgaggtctgactggccccattggcccccctggcccagctggtgccaat ggtgagaagggagaagttggacctcctggtcctgcaggaactgctggtgctcgtggtgcc ccgggcgaacgtggagagactggaccccccgggcctgctggattcgctggtcctcctggt gctgatggccagcccggtgccaaaggcgagcaaggagaggccggccagaaaggtgatgcc ggtgccccgggtcctcagggcccctctggagctcctgggcctcagggtcctactggcgtg actggtcctaaaggagcccgaggcgctcagggccccccgggagccaccggattccccgga gctgctggccgcgttggaccacccggctctaatggcaaccctgggccccccggtccccct ggtccttctggaaaagatggtcccaaaggtgctcgaggagacagcggcccccctggccga gctggtgaccctggcctccaaggtcctgctggaccacctggcgagaagggagagcctgga gatgatggtccctctggtcccgacggtcctccaggtccccagggtctggctggtcagagg ggcatcgttggcctgcctgggcagcgtggtgagcgaggattccctggcctgcctggccca tcgggtgagcctggcaagcaaggagctcctggtgcatctggagaccgaggtccccctggc cctgtgggtcctcctggcctgactggtcctgctggtgaacctggacgtgagggaagccct ggtgctgatggcccccctggcagagatggtgcggctggagtcaagggtgatcgtggtgag gctggccccgtaggtgctcccggaacccctggaccccctggctctcctggccccgccggc ccaactggcaagcagggagaccgaggagaagctggtgcacaaggccccatgggacccgca ggaccggctggagcccgaggaatgccaggccctcaaggcccccgaggtgacaaaggagaa gctggagaggctggcgagaggggactgaagggacaccgtggcttcaccggtctgcagggt ctgcccggcccccctggtccttctggagaccaaggtgcttctggtcctgctggtccttct ggccctagaggtcctcctggccctgtcggtccctctggcaaagatggtgctaatggaatc cctggccccatcggacctcctggtccccgtggacgttcaggcgaaaccggccccgctggt cctcctggaaatcctggcccccctggtcccccaggtccccccggccccggcatcgacatg tccgcttttgctggcctaggccagagagagaagggccccgaccccctgcagtacatgcgg gctgacgaggcagctggcaacctgagacagcacgacgccgaggtggatgccacactcaag tccctcaacaaccagattgagagcctccgcagccccgagggctcccgcaagaaccccgct cgcacctgccgggacctgaaactctgccaccctgaatggaagagcggagactactggatc gaccccaaccagggctgcaccttggacgccatgaaggttttctgcaacatggagactggt gagacctgcgtctaccccaacccagccagcgttcccaagaagaactggtggagcagcaag agcaaggacagaaagcacatctggttcggagaaaccatcaacggcggcttccacttcagc tatggagatgacaacctggcccccaacactgccaacgtccagatgaccttcctgcgcctg ctgtccaccgagggctcccagaacatcacctaccactgcaagaacagcatcgcctacctg gacgaagcagccggcaacctcaagaaggccctgctcatccagggctccaacgacgtggag atccgggctgagggcaacagcaggttcacgtacactgtcctgaaggatggctgcacgaaa cacaccggtaagtggggccagactctgatcgagtaccggtcacagaagacctcgcgcctc cccatcattgacattgcacccatggacataggagggcctgagcaggaatttggtgtggac atagggcctgtctgcttcttgtaa

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