KEGG   Vicugna pacos (alpaca): 102528905
Entry
102528905         CDS       T08098                                 
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
vpc  Vicugna pacos (alpaca)
Pathway
vpc03020  RNA polymerase
vpc03420  Nucleotide excision repair
vpc05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    102528905 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    102528905 (POLR2D)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    102528905 (POLR2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vpc03021]
    102528905 (POLR2D)
   03400 DNA repair and recombination proteins [BR:vpc03400]
    102528905 (POLR2D)
Transcription machinery [BR:vpc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     102528905 (POLR2D)
DNA repair and recombination proteins [BR:vpc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      102528905 (POLR2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Maelstrom Tfb4
Other DBs
NCBI-GeneID: 102528905
NCBI-ProteinID: XP_006196133
UniProt: A0A6I9HUK2
LinkDB
Position
5
AA seq 142 aa
MAAGGSDPRAGDVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggcgggtggcagtgacccgcgggctggcgatgtagaggaggacgcctcacagctc
atctttcccaaagagtttgaaacagctgagacacttctaaattcagaggttcacatgctg
ctggagcatcgaaagcaacagaatgagagtgcagaggatgaacaggagctttctgaagtc
ttcatgaaaactttaaactacacagctcgcttcagtcgtttcaaaaacagagagaccatt
gccagtgtccgcagcttgttgctccagaagaagcttcacaagtttgagctggcctgtttg
gccaacctttgcccggagactgctgaggagtccaaggctctgatcccgagcctggaggga
cggtttgaagacgaggagctgcagcagatccttgatgatatccagaccaagcgcagcttc
cagtattaa

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