Vicugna pacos (alpaca): 102528940
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Entry
102528940 CDS
T08098
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
102528940 (TRPA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vpc04040
]
102528940 (TRPA1)
Ion channels [BR:
vpc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102528940 (TRPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
ANK_LRRK2
PKD_channel
DUF7694
Motif
Other DBs
NCBI-GeneID:
102528940
NCBI-ProteinID:
XP_006202494
UniProt:
A0A6I9I611
LinkDB
All DBs
Position
29
AA seq
1120 aa
AA seq
DB search
MKRSLRKMLRPGEKKEPQGVVYQGVEDDMDDSKDSFKVVFEENACGLQNFMKKQNRLKKY
NDTNASPLHHAAEEGEVELMEMIVSDSSCEELNVTDDYGNTPLHWAAEKNQVESVKFLLL
QGANPNLRNYNLMAPLHVAAQGLHNEVLKILVEHSSTDINLEGENGNTALIITCFKDNSE
ALQILLNKGANLCKSNKWGCFPIHQAAFSGAKKCMEIILKFGEEHGYSRLSHINFVNNGK
ASPLHMAVQSGDLEMIKMCLDNGAQLDLVEKGKCTALHFAATQGATEIVKLMISSYSGSS
DIVNAVDGNQESLLHKASLFDHHELADYLISVGADIDSTDSEGRSPLILATASASWNTVN
LLLSKGARVDIKDHLGRNFLHLTVQQPYGLKNLRPEFMQMQHIKQLVMDEDNDGCTPLHY
ACRQGVPVSVNNLLDFNVSIHSKSKDKKSPLHFAASYGRINTCQRLLQDMSDRRLLNEGD
LHGMTPLHLAAKNGHDKVVQLLLKKGALFLSDHNGWTALHHASLGGYTQTMKVILDTNMK
CADRPDEEGNTALHFAAREGHAKAVALLLSYNADIVLNKQLASFLHVAIHNKRKEVVLTT
IKNKRWEECFMVFSHYSPSNKCPVLEMVEYLPECMKVLLDFCMIPSTEDKSSHDYHIEYN
FRYLQCPLEFTKKVTPIQDVTYEPLKTLNVMVQHNRTELLNHPVCKEYLLMKWLAYGFRA
HVMNLGSYCLGLLPMTFLVVNIRPGMAFNSTGIINETSDHSEILDTKNSYTIKVCMILVL
LSSIFGYCKEVAQIFQQKRNYFLDNKNALEWVIYTTSIIFVSPLFIDIPAYVQWQCGAIA
VHFYWINFLFYLQRFEKCGIFIVMLEVIMKTLLKSTVVFAFLFVAFGLSFYVLLSVQDAF
SSPLLSVMQTFSMMLGDISYRDAFLEPFLRNKLAYPILSFAQLIFFTIFVPIVLMNLLIG
LAVGDIAEVQKHALLKRTAMQVELHTSLEKKLPLWFLHKVDQKSIVVYPNRPRYGGGLLR
GVFHYIFCTQEARQEIPNVDTSLETEIVKQKYRLKDLSSLLEKQHELIKLIIQKMEIISE
TEDEDYHSSFQDRFKKQQLEQRNSKWNSVLRAVKAKTQCP
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcagcctgaggaagatgctgcgcccgggggagaagaaggagccccagggcgtc
gtctaccagggagtggaggacgacatggacgactccaaggactcttttaaggtggttttt
gaggaaaatgcatgtggtttacaaaacttcatgaagaagcaaaacagattgaaaaaatac
aatgatacgaatgcctcccctttgcatcacgctgcggaggaaggtgaagtggagctgatg
gagatgatcgtcagtgactcctcttgtgaagaactgaatgttacggatgattatggaaat
acccctctgcactgggctgcagaaaagaaccaggttgaaagtgttaagtttctccttctc
caaggagccaacccaaacctccggaactacaacctgatggctccgctgcacgtggctgcg
cagggcctgcacaacgaggtgctgaagatcttggttgaacacagcagtactgacattaat
ttggaaggagaaaatggaaacacagctttgataatcacatgcttcaaagataacagtgaa
gcactgcagattttgttaaataaaggagctaatctctgtaaatcaaataaatggggatgc
ttccctattcaccaggctgcattttctggtgccaaaaaatgcatggaaataatactaaag
tttggtgaagaacacgggtatagcagactgtctcacattaactttgtgaacaacgggaaa
gctagccccctccacatggcggtccagagtggtgacctagaaatgattaaaatgtgcctg
gacaacggtgcacaattggacctggtggagaagggcaagtgcacagccctccattttgct
gccacccagggggccactgagattgttaaactgatgatatcttcgtattctgggagcagt
gatattgtcaatgcagtggacggaaatcaggagtcgctgcttcacaaagcctcattattt
gatcaccatgaactagcagactacttaatttcagtgggagcagatattgatagcaccgat
tccgaaggacgctctccgcttatattagcaactgcttccgcatcctggaatactgtaaat
ttgctcctctctaaaggtgcccgggtagacataaaagatcatcttggacgtaattttttg
catttgactgtacaacaaccttacggattaaagaatttgcgacctgagtttatgcagatg
caacatattaaacagctggtaatggatgaagacaacgatgggtgtactcccctacattat
gcatgtagacagggggtccctgtctctgtaaataacctgcttgacttcaatgtgtccatt
cactccaaaagcaaagataagaaatcacccctgcattttgcagccagttatgggcgcatt
aacacctgtcagaggctcctgcaagacatgagcgacaggaggcttttgaatgaaggtgac
cttcatgggatgactcctctccacctggctgcaaaaaatgggcatgacaaagtagttcaa
cttcttctgaaaaaaggtgcattatttctcagtgaccacaatggctggactgctttgcat
cacgcttccttgggcgggtacactcagaccatgaaggtcattcttgacactaatatgaag
tgcgcggatcggccagatgaagaagggaacactgcgctccactttgcggcaagagagggc
cacgccaaggccgtcgcactgctcctgagctacaatgccgacatcgtcctcaacaagcag
ctggcctcctttctgcacgttgcaattcacaataagagaaaggaggtggttctcacgacc
atcaagaacaaacgatgggaagaatgttttatggtttttagtcattattctccaagcaat
aaatgtccagtcttggaaatggtagaatacctccctgaatgcatgaaggtacttttagat
ttctgcatgataccttccacagaagacaagtcctcccacgactaccacattgagtataat
ttcagatatcttcaatgtccgttagaattcaccaaaaaggtaacacctatacaggacgtt
acgtacgaacctctgaaaaccctcaatgtaatggttcaacataaccgcacagagctgctc
aaccatcctgtgtgtaaagaatatttacttatgaaatggttggcttacgggtttagagcc
cacgttatgaacctaggatcttactgccttgggctcttgcctatgacctttctagttgtc
aatataagaccaggtatggctttcaattcaaccggcatcatcaatgaaactagcgatcat
tcagaaatattagacaccaagaattcatatactataaaagtttgcatgattttggtttta
ctatcaagtatatttggatattgcaaagaagtggctcaaatttttcagcagaaaaggaat
tactttttggataataagaatgcacttgaatgggttatctacacaacaagcatcattttt
gtgtcacccctgttcattgatataccagcctatgtgcagtggcaatgtggagccatcgcc
gtacacttctactggatcaacttcttattctatcttcagagatttgaaaaatgtggcatt
tttatcgtgatgttggaggtaatcatgaaaactctgttgaaatctacagtcgtgtttgcc
ttcctttttgtggcttttggactcagcttttatgtcctcttgagtgtacaggatgctttc
agctctccgctgctttctgtaatgcagaccttcagcatgatgctaggagatatcagctat
cgtgatgccttcctagaaccgtttttgagaaataaactggcatatccaattctgtccttt
gcacaacttatttttttcaccattttcgtcccaattgtcctcatgaatttacttattggt
ttggcagttggtgacatcgctgaggtccagaagcacgcactgttgaagaggactgctatg
caggtggaacttcataccagcttagagaagaagctgccactctggttcctacacaaagtc
gatcagaaatctatcgtcgtgtaccccaacagacccagatatggtggaggactcttacgt
ggtgtatttcattatatcttctgcacccaagaagcaagacaagaaataccaaatgttgat
acatctttggaaaccgaaatagtaaagcaaaaataccggctgaaggatctcagttctctt
ctggaaaaacagcacgaacttattaaactcatcattcagaagatggagatcatctctgag
acagaagatgaagattaccatagttcttttcaagacaggtttaagaagcagcagttagaa
cagaggaatagcaagtggaattctgtactgagagcagtaaaggcgaaaacacagtgccct
tag
DBGET
integrated database retrieval system
