KEGG   Vicugna pacos (alpaca): 102529192
Entry
102529192         CDS       T08098                                 
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain
  KO
K06237  collagen type IV alpha
Organism
vpc  Vicugna pacos (alpaca)
Pathway
vpc04151  PI3K-Akt signaling pathway
vpc04382  Cornified envelope formation
vpc04510  Focal adhesion
vpc04512  ECM-receptor interaction
vpc04518  Integrin signaling
vpc04820  Cytoskeleton in muscle cells
vpc04926  Relaxin signaling pathway
vpc04933  AGE-RAGE signaling pathway in diabetic complications
vpc04974  Protein digestion and absorption
vpc05146  Amoebiasis
vpc05165  Human papillomavirus infection
vpc05200  Pathways in cancer
vpc05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    102529192 (COL4A6)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102529192 (COL4A6)
   04518 Integrin signaling
    102529192 (COL4A6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102529192 (COL4A6)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102529192 (COL4A6)
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    102529192 (COL4A6)
  09154 Digestive system
   04974 Protein digestion and absorption
    102529192 (COL4A6)
  09158 Development and regeneration
   04382 Cornified envelope formation
    102529192 (COL4A6)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    102529192 (COL4A6)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    102529192 (COL4A6)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    102529192 (COL4A6)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    102529192 (COL4A6)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    102529192 (COL4A6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vpc04147]
    102529192 (COL4A6)
   00536 Glycosaminoglycan binding proteins [BR:vpc00536]
    102529192 (COL4A6)
Exosome [BR:vpc04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   102529192 (COL4A6)
Glycosaminoglycan binding proteins [BR:vpc00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   102529192 (COL4A6)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 102529192
NCBI-ProteinID: XP_031531332
LinkDB
Position
Unknown
AA seq 1706 aa
MHPGLWLLLVTLCLTEELAGAGEKKAYGKPCGGQDCSGGCKCFPEKGARGRPGPIGIQGP
TGPPGFPGPSGLSGLKGERGSPGPLGPYGPKGDKGPMGVPGFLGINGIPGHPGQPGPRGP
PGLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGEPVLAQGSFKGMKGDPGLPGLD
GITGPQGAPGSPGAVGPMGPPGLQGPPGPPGFPGPEGNMGLGFQGEKGVKGDVGLPGPAG
PPPSTGELEFMGFPKGKKGSKGEPGLPGFPGISGPPGLPGFGIAGEKGEKGIPGLPGPRG
PMGLEGVQGPPGSQGKKGSSGFPGLNGFPGIKGEKGGIGLPGPDVFIDTDGAVISGYPGD
PGVPGRPGLKGDKGIQGLPGPSGVPGLPAIPGVPGALGPQGVPGLKGDQGNPGRTTIGAS
GLPGRDGLPGPPGPPGPPGPAFETRTLQSTEPGLPGLRGERGPKGNPGPKGIKGDSGFCA
CDGGVPNIGPPGEPGLPGPPGLLGLPGLKGARGDPGSGGAQGPSGDPGLFGPRGPAGPKG
KKGEPALSTGSGMPGDRGDPGSQGLPGETGAPGKDGIPGLLGLPGLPGDGGQGFPGEKGL
PGPPGEKGRSGPIGPPGIGLPGSPGPRGLPGDQGVDGLPGQQGPPGLPGDCCCREKVGTG
DLDTEGGVTLPCIIPGSYGPPGFPGAPGFPGPKGAHGFPGTPGPPGLRGNKGEPGSPGLV
HLPELPGFPGPRGEKGLPGFPGLPGKDGLPGKVGSPGLPGSKGAPGDIIGAESGVPGEQG
LQGLPGDRGFPGDSGLPGPKGLFGKSGLLGPKGERGSPGTPGRVGQPGPPGSGGLFGIKG
KPGLPGTXXXXXXSGRPGKKGPRGEIGSPGSAGKRGLPGLKGLPGSPGLIGFLGSSGLPG
GTGLPGLPGPKGEKGSIGLIGFPGIPGLPGIPGASGLKGIPGSAGRVGPSGWAGSPGEKG
DRGDRGPVGIPSPRPPMLNLLFKGDKGSQGSVGSIGFPGPRGDKGEAGRPGPPGLPGAPG
FPSIIKGLSGRPGFPGSAGLRGLPGLKGSPGITGFPGIPGDSGSQGLSGAPGLPGASGLP
GLKGDQGQTLGISGSPGPKGQPGESGFKGAKGKDGPAGDVGFPGNKGEAGKVGISGDVGL
PGSPGLPGITGMRGNSGLPGSPGHPGATGPLGPPGLVGTKGFPGLPGLHGLNGLPGTKGT
HGTPGPSITGVPGPAGLPGLKGEKGSPGIGIGAPGRPGMRGQKGSQGFPGLQGPAGPPGA
PGLSLPSVIAGQPGDPGRPGLDGERGRPGPPGPPGPPGPSSDQGDPGDLGLPGIPGPQGP
KGDQGIPGFSGLPGELGLKGMRGEPGFMGIPGKAGPPGDPGFPGMKGKAGPRGFSGPPGA
PGQTPIAEAIQVPPGPMGLPGIDGIPGLPGDPGIQGPVGLQGSKGLPGIPGKDGPSGLPG
PPGALGDPGLPGLQGPPGFEGAPGKQGPFGRAGMPGQSVRVGYTLVKHSQSEQVPLCPTG
MSQLWVGYSLLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWL
STTAPIPMMPVGQTQIPQYISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLM
HTAAGAEGGGQSLVSPGSCLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFGE
EPVSETLKAGQLHTRVSRCQVCMKSV
NT seq 5121 nt   +upstreamnt  +downstreamnt
atgcaccctgggttgtggctgctcctggttacgttgtgcctgaccgaggaactggcagga
gcgggagagaagaaggcctatggaaagccatgcgggggccaagactgcagtgggggctgt
aaatgctttcctgagaaaggagccagagggcgaccgggaccaattggaattcaaggtcca
acaggtcctccaggatttcctggccctagtggtttatcagggctgaaaggagagaggggc
tccccaggccctctgggaccatatggaccaaaaggagataagggtcctatgggagttcct
ggctttcttggcatcaatgggattccgggtcaccctggacagccaggacccagaggccca
cctggcctggatggctgtaatggaactcaaggtgctgttggatttccaggccctgatggc
tatcctgggcttctcggaccacccgggcttcctggacaaaaaggctctaaaggtgaacct
gtccttgcccaaggtagtttcaaaggaatgaagggggatcctgggctgccgggactggat
ggaattactggcccacagggagcacccggatctccaggggctgtaggacccatgggacca
ccaggattgcaaggtcctccagggccccccggtttccctggtcctgaggggaatatgggg
ttaggtttccaaggagagaaaggagtcaagggggatgttggcctgcctggccctgcagga
cccccaccatctactggggaactggaatttatgggatttcccaaagggaagaaaggatcc
aagggtgaaccagggcttccaggtttcccaggaataagcggtcctccaggtctcccggga
tttggaattgctggagaaaaaggagaaaagggaatccctggcttgccaggacctcggggt
cccatgggtttagaaggagtccaaggccctccagggagtcagggcaagaaggggtcatca
ggttttcccgggcttaatggattcccaggaattaagggtgaaaagggtggcattggcctg
ccaggcccagatgttttcatcgatacagatggtgctgtgatctcaggttatcctggagac
cctggtgtaccaggccgcccaggccttaaaggggataaaggtatccagggcctgcctggc
ccttccggtgtccctggattaccagctataccaggtgtccccggtgctctaggcccccag
ggagttccaggcctgaagggggaccaaggaaaccctggccgcaccacaattggggcatct
ggcctccctggcagagatggtttgccaggcccaccaggcccaccaggcccacccggtcca
gcatttgagactagaaccctacagagcacagagccagggttgcctggtctccgaggagaa
cgaggtccaaagggaaacccaggcccgaaaggaataaaaggggactcaggtttttgtgct
tgtgatggtggtgtccctaacattggaccacccggggagccaggcctgcctggaccacca
ggtcttctaggtcttccaggcctaaaaggagccagaggagatccaggctctgggggtgca
cagggcccatcaggagatccaggtttatttgggcctcgaggtccggccggccccaaagga
aagaaaggggaaccagctctcagtacaggatcagggatgccaggagatcggggtgatcct
ggctcccaggggctccctggggagacaggagccccaggcaaggatggaataccaggttta
ctgggtctgccaggccttccgggtgatggtggacagggcttcccaggtgaaaaggggtta
ccaggacctcctggtgaaaaaggccgtagtggtccaattggccccccaggaattgggcta
ccaggatctcctggacctcgtgggcttcctggagatcaaggagtagatggattaccaggg
caacaaggcccccctgggcttccaggtgactgctgctgcagggagaaggttggcacagga
gacttagacacagagggaggtgtcaccttgccttgtattattcctgggtcatatggtcca
ccaggattcccaggagctcccggattcccaggccccaaaggggcccatggcttccctggg
actccaggcccgcctggactgcgtggaaataaaggagagcccggaagtccaggattggtt
cacctccctgaactgccaggatttccgggacctcgtggggagaagggcttgcctgggttt
cccgggctccctggaaaagatggcttgcctgggaaagttggcagtccaggcttaccaggt
tccaagggagctcctggtgacatcattggcgctgaaagtggtgttccgggggagcaaggc
ctccagggactgccaggggacagaggatttccaggagactctggccttccgggacccaag
ggtttgtttgggaagtcaggcttgcttggccccaaaggtgagcggggcagccctggaaca
ccaggccgcgtgggacagccaggccccccaggatctggtggtctattcggcatcaagggc
aaacccgggctcccaggaacannnnnnnnnnnnnnnnattcaggacgtcctggaaagaaa
ggtccaagaggcgagataggttcccctggatcagcaggaaagagaggcctgcctgggttg
aaaggccttccgggatctccagggctgattggcttcctggggagctcgggcttgccaggg
ggcactgggttgccaggtctgccaggtccgaagggggagaaggggtccattggactgata
ggttttccagggattccaggtctccctggtattcctggtgcaagcgggttaaagggaatt
cctgggtcagctggccgagtgggaccatctggatgggctggcagccctggtgaaaaagga
gacagaggcgaccgagggccagttgggatacccagtccaagacctccgatgctgaacctc
ctcttcaagggagacaaaggttctcagggctcagtcggatccatcggatttcctgggccc
agaggtgacaaaggagaggctggccgccctgggccaccaggcttgcctggagctcctggc
tttcccagcatcatcaagggacttagtgggagaccaggcttccctggctctgcaggacta
cgaggcttacccggcctgaagggttcccccggaatcacaggtttcccaggaataccagga
gacagtggttcacagggtctcagtggagctcccgggctcccaggagcatctggtctccca
ggtttaaaaggagatcaaggccagacacttggaatttctggtagcccaggacccaaggga
caacctggggaatctggtttcaaaggtgcaaaaggaaaagacggaccagctggtgatgtg
ggtttcccaggaaacaaaggtgaagctgggaaagttggtatttctggagacgttggcctt
cctggctccccaggactccctgggatcacaggcatgagaggaaattcagggcttccgggt
tctccgggccacccaggggcaaccgggcccctgggaccacctggcctagtaggaaccaaa
ggtttccctggacttcctggtttacatgggctgaatgggcttccaggaaccaaggggacc
catggaactccaggacctagtataaccggtgtgcctgggccagctggcctgcctggcctc
aaaggggaaaaaggttctccaggaattggcattggagccccaggaaggccaggcatgaga
ggacaaaaaggtagccaaggtttcccagggctccagggccccgctggtccccccggggcc
ccaggcctctccttgccctcagtcatagcaggacagcctggagatcctgggcgaccaggc
ctagatggagaacgaggccgcccagggcccccgggccccccagggcccccaggtccatcc
tcggatcaaggtgaccccggagaccttggcctccctggaattcctggccctcaaggcccc
aagggagaccaaggaattccaggtttctccggcctccctggagagctaggactgaaaggc
atgagaggtgagcctggcttcatggggattccaggcaaggctgggccacctggagaccca
ggatttccagggatgaaggggaaggcagggccaagaggcttttccggccccccaggtgct
cctggacaaacaccaattgcagaagccatccaggttcctcctggacccatgggcctacca
ggcatcgatggcatccctgggctcccaggggatcctgggattcagggtcctgtaggccta
caaggctccaaaggtttacctggcatccctggtaaagatggccccagtggactccctggc
ccacctggggctcttggtgatcctggtctccctggactgcaaggccctccaggatttgaa
ggagctccagggaagcagggccccttcgggagggctggaatgcctgggcagagtgtgaga
gtgggctacaccttggtgaagcacagccagtcggaacaggtgcctctgtgtcccaccggg
atgagccagctgtgggtgggttacagcctgctgttcgtggaggggcaggagaaagcccac
aaccaggatctggggtttgccggctcctgcctgcctcgcttcagtaccatgcccttcatc
tactgcaacatcaacgaagtgtgccactatgcccggcgcaacgataaatcctactggctc
tccaccaccgcccccatccccatgatgcccgtcggccagacgcagattccccagtacatc
agccgctgctctgtgtgtgaggcgccctcgcaagccatcgctgtgcacagtcaggacatc
accatcccgcagtgccccctgggctggcgcagcctctggatcgggtactccttcctcatg
cacacggctgctggcgccgagggtggcggccagtccctggtctcccctggctcctgccta
gaggatttccgggccacacctttcatcgagtgcagtggtgcccggggcacctgccactac
tttgccaacaagtacagcttctggctgacaacagtggaggagaggcagcagtttggggaa
gagcctgtatctgagacgctaaaagccgggcagctccacacccgggtcagccgctgccag
gtgtgtatgaaaagcgtgtag

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