Vicugna pacos (alpaca): 102529277
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Entry
102529277 CDS
T08098
Symbol
PTCH2
Name
(RefSeq) protein patched homolog 2 isoform X5
KO
K11101
patched 2
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04340
Hedgehog signaling pathway
vpc05200
Pathways in cancer
vpc05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
102529277 (PTCH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102529277 (PTCH2)
09162 Cancer: specific types
05217 Basal cell carcinoma
102529277 (PTCH2)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
Patched
MMPL
Motif
Other DBs
NCBI-GeneID:
102529277
NCBI-ProteinID:
XP_006200465
UniProt:
A0A6I9HZL2
LinkDB
All DBs
Position
13
AA seq
1206 aa
AA seq
DB search
MARPPPLGELPPGYTSPARSAAPQILAGSLKAPLWLRAYFQGLLFSLGCGIQRHCGKVLF
LGLLAFGALALGLRVAIIETDLEQLWVEAGSRVSQELQYTKEKLGEEAAYTSQMLIQTPR
REGENVLTPEALGLHLQAALTASKVQVSLYGKSWDLNKICYKSGVPLIENGMIERMIEKL
FPCVILTPLDCFWEGAKLQGGSAYLPGRPDIQWTNLDPEQLLEELGPFASLEGFRELLDK
AQVGQAYVGRPCLHPDDLHCPPSAPNHHSRQAPNVAQELRGGCHGFSHKFMHWQEELLLG
GMARDSQGQLLRAEALQSTFLLMSPRQLYEHFRGDYQTHDIGWSEEQAGTVLQAWQRRFV
QLAQEALPENASQQIHAFSSTTLDDILHAFSEVSTARVVGGYLLMLAYACVTMLRWDCAQ
SQGAVGLAGVLLVALAVASGLGLCALLGIAFNAATTQVLPFLALGIGVDDIFLMAHAFTE
APPGTPLQERTGECLQRTGTSVALTSINNMVAFFMAAVVPIPALRAFSLQAAIVVGCNFA
AVMLVFPAVLSLDLHRRHCQRLDVLCCFSSPCSARVIQILPQELGDRTVPVGIAHLTATV
QAFAHCEASSQHVVTILPPQAHLVPPPSDPLGSELFSPGGSTRDLLGQEEGTRQKAVCRS
LPCARWNLAHFARSQFAPFLLQSHTKAMVLVLFGALLGLSLYGATLVQDGLALTDVVPRG
TKEHAFLSAQLRYFSLYEVALVTQGGFDYAHSQRALFDLHQRFSSLKAVLPPPATQAPRT
WLHYYRNWLQGIQAAFDQDWASGRITRHSYRNGSEDGALAYKLLIQTGDAQEPLDFSQLT
TRKLVDKEGLIPPELFYIGLTVWVSSDPLGLAASQANFYPPPPEWLHDKYDTTGENLRIP
AAQPLEFAQFPFLLHGLQKTADFMEAIEGARAACAEAGQAGVRAYPSGSPFLFWEQYLGL
RRCFLLAVCILLVCTFLVCALLLLNPWTAVLIVLVLAVMTVELFGIMGFLGIKLSAIPVV
ILVASVGIGVEFTVHVALGFLTAQGSRNLRAARALEHTFAPVTDGAVSTLLGLLMLAGSN
FDFIVRYFFVVLTVLTLVGLLHGLVLLPVLLSILGPPPEVVQMYKESPEVLSPPAPQGGG
LRWSVSPTQPRSFARVTTSMTVAFHPPPLPGAYIHPASDEPTWSPAATPAGNGSSNLSSR
GQCPAT
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcctccacccctcggggagctgcccccgggctacacatccccagctcgatcc
gcagcaccccagatcctagctgggagcctgaaggctccactctggcttcgtgcttacttc
cagggcctgctcttctctctgggctgcgggatccagagacactgcggcaaagtgctcttc
ctgggacttctggcctttggggccctagcactgggtctccgcgtggccatcattgagaca
gacctagaacagctctgggtggaagcaggcagccgggtgagccaggagctgcagtacacc
aaggagaagctgggagaggaggctgcatatacctcccagatgttgatacagactccgcgc
cgggagggggagaatgtcctcacacctgaggcgcttggcctccacctccaggcagccctc
acggccagtaaagtgcaagtatcactctatggaaagtcctgggatctgaacaaaatctgc
tacaagtcaggagttcccctaattgagaatggaatgattgagcggatgattgagaagctg
tttccgtgcgtgatcctcacccccctcgactgcttctgggagggagccaaactccaaggg
ggctctgcctacttgccgggccgccccgacatccaatggaccaacctggatccagagcag
ctgctggaggagctgggcccctttgcctcccttgagggcttccgggagctgctagacaag
gcacaggtgggccaggcctacgtggggcggccctgtctgcacccagacgacctccattgc
ccacctagtgctcctaaccatcacagcaggcaggctcccaatgtggctcaggagttgagg
gggggctgtcacggcttctcccacaagttcatgcactggcaggaggagctactgctggga
ggcatggccagagactcccaaggacagctgctgagggcagaggccctgcagagcaccttc
ctgctgatgagtccccgtcagctgtatgagcacttccggggcgactaccagacacacgac
atcggctggagcgaggagcaggccggcacagtgctgcaggcttggcagcggcgcttcgtg
cagctggcccaggaggccctgcctgagaatgcgtcccaacagatccacgccttctcctcc
accaccctggatgacatcctgcatgctttctctgaagtcagcactgctcgtgtggtggga
ggctacctgctcatgctagcctacgcctgcgtgacgatgctgcgatgggactgtgcccag
tcccagggtgctgtgggccttgccggggtgctgctggtggccctggcagtggcctcgggc
ctcgggctctgcgccctgcttggcatagccttcaatgccgccactacccaggtgctgccc
ttcttggcactgggcattggtgtggatgacatattcctgatggcacatgccttcacagag
gctccacctggcacccctctccaggagcgcacaggagagtgtctgcagcgcacaggcacc
agcgtcgcactcacatccatcaacaacatggtcgccttcttcatggccgctgtggttccc
atccctgcactgcgggccttctccttgcaagcggccatagtggttggctgcaactttgca
gccgtgatgcttgtcttcccagcggtcctcagcctggacctgcaccggcgccactgccag
cgccttgatgtgctctgctgcttctctagcccctgttctgctcgtgtgattcaaattctg
ccccaggagctgggggataggacagttccagtgggcattgcccacctgactgccacggtt
caagcctttgcccactgtgaagccagcagccagcatgtggtcaccatcctgcctccccaa
gcccacttggtgcccccaccttctgacccactgggctctgagctcttcagcccaggaggg
tctacacgggaccttctaggccaggaggagggtacaaggcagaaggcagtctgcaggtcc
ctgccctgtgcccgctggaatcttgcccattttgcccgctctcagtttgcaccatttctg
ctccagtcccacaccaaggccatggtactggtactttttggggctcttctgggcttgagc
ctctatggagcgaccttggtgcaagatgggctggccctgacagatgttgtgcctcggggc
accaaggagcatgccttcctgagcgcccagctcaggtacttctctctgtacgaggtggcc
ctggtgacacagggtggctttgactacgcccactcccaacgcgccctctttgatctgcac
cagcgcttcagttccctcaaggccgtgctgcccccaccagccacccaggcgccccgcacc
tggctgcactattaccgcaattggctacagggaatccaggcggcgtttgaccaggactgg
gcttctggacgcatcacccgccactcgtaccgcaatggctctgaggatggagccctggcc
tataagctgctcatccagaccggggatgcccaggagcctctggatttcagccagctgacc
acaaggaagctggtggacaaggaggggctgattccacctgagctcttctacatagggctg
actgtgtgggtgagcagtgaccccctgggtctggcagcctcacaggccaacttctaccca
ccacctcccgagtggctgcatgacaagtacgacaccaccggggagaaccttcgcatcccg
gcggcccagcccctggagtttgcccagttcccctttctactgcacggcctccagaagact
gcagacttcatggaggccatcgagggggcccgggcagcgtgtgccgaggcaggccaggct
ggggtacgtgcctaccccagcggctcccccttcctcttctgggagcagtatctgggcctg
cggcgctgcttcctgctggcggtctgcatcctgttggtgtgcactttcctcgtctgtgcc
ctactgctgctcaacccctggacagcagtccttatagtgctggtcctggcagtgatgact
gtggagctctttggcatcatgggcttcctgggcatcaagctgagcgccatccccgtggtg
atccttgtggcctctgtgggaattggtgtcgagttcaccgtccacgtggctctgggcttc
ctgaccgcccagggtagccggaacctgcgggctgcccgggccttagagcacacatttgcc
ccggtgactgatggggccgtctccacattgctgggtctgctcatgcttgctggttccaac
tttgacttcattgtaaggtacttcttcgtggtactgacagtactgacacttgtgggcctc
ctccacgggctcgtgctgctgcctgtgctgctgtccatcctgggccccccaccagaggtg
gtacagatgtacaaggagagcccagaggtcctgagccccccagctccacagggaggaggg
ctcagatggtcggtatcccccacccagccccgaagctttgccagagtgactacctctatg
accgtggccttccacccacccccactgcctggtgcctacatccacccagcctctgatgag
cctacttggtcccctgctgccacaccagctggcaatggctccagcaacctcagttctagg
ggacaatgtccagccacctga
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