Vicugna pacos (alpaca): 102529336
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Entry
102529336 CDS
T08098
Symbol
EXOSC10
Name
(RefSeq) LOW QUALITY PROTEIN: exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102529336 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpc03019
]
102529336 (EXOSC10)
Messenger RNA biogenesis [BR:
vpc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
102529336 (EXOSC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
102529336
NCBI-ProteinID:
XP_006196707
LinkDB
All DBs
Position
13
AA seq
880 aa
AA seq
DB search
MAPPSPRESKAQSATSAANWAGDGEMVLPGFPDADSFVKFALGSVVAVTKASGGLPQFGD
EYDFYRSFPGFQAFCETQGDRLLQCMSRVMQYHGCRSNIKDRSKVTELEDKFDLLVDTND
VILERVGILLDEAAGVNKNQQPVLPAGLQVPKTIVSSWNRKAGEYSKKTKSETFRLLHAK
NIIRPQLKFREKIDNSNTPFLPKIFIKPNAQKPLPQALSKERRERPQDRPEDLDVPPALA
DFIHQQRTQQVEQDMFAHPYQYELDHFTPPDSVLQKPEPQVSAQPXLTDGARLNEKLLNC
QEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYILNESLTDPAIVKVFHG
ADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCSVESNKQYQLADWRIR
PLPEEMLNYARDDTHYLLYIYDKMRLELWERGNEQPVQLQVVWQRSRDICLKKFIKPIFT
DESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARREDESYGYVLPNHMMLKIAEELPKE
PQGIIACCNPVPPLVRQQINEMHLLIQQAREMPLLKSEVAAGARRSGPQPTPERLENVLF
GPHDCSHAPSDGYPLVPASGPEPAQKQDGLLPGREDGEALLDTRCLIATAVITLFNEPSA
EENGRXPLTTAQKKARNIMESFENPFRMFLPSLEHRAHISQAAKFDPSSKIYEISNRWKL
ASQVQVQKESKELAKKKAAERTAARDQAEEEYKATAEQAVSVRQQAALENTAKKRERTTS
DPRTTEQKQEKKRLKTSKKPKDPDPPEKEFTPYDYSKSDFKAFAGNSKSKPSPQFDPNKQ
PQSGKKCLAAKKIKQSMGNKSMSFPTGKSDRGFRHSWPKR
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggcgccccccagtccccgagagtccaaggcccagtcggccacgagcgcagccaactgg
gcaggagacggggagatggtgctgccgggcttcccggacgcagatagcttcgtgaagttt
gctcttgggtcagtggtggcagtcaccaaggcatctgggggcctaccacagtttggtgat
gagtatgatttttaccgaagttttcctggcttccaggcattttgtgaaacacagggagac
aggttgcttcagtgcatgagtagggtaatgcaataccatgggtgtcgaagcaacattaag
gaccggagtaaagtgactgagttggaggacaagtttgatttgctagttgataccaatgat
gttattctggaaagagtgggtatcttactggatgaagcagcaggtgtgaataagaatcaa
cagcctgtcctccctgcaggattacaggtccccaaaacaatagtgtccagctggaaccgg
aaggcaggagaatatagcaaaaaaacaaaatctgaaactttccggctgcttcatgcaaaa
aacatcatccgacctcagcttaaattccgagaaaagattgacaattccaacacgccattc
cttcccaaaatcttcatcaagcccaatgctcagaaacccctccctcaggcactctctaaa
gaaaggcgggagcgcccacaggatcgccctgaggacttggatgtgccccctgccctggcg
gacttcatccatcagcagagaacccagcaggtggagcaggacatgtttgcacatccttat
caatacgaactagatcacttcactccaccagattcagtccttcaaaagccagagcctcag
gtaagtgcccagccttagttgacggacggtgcccgactgaatgaaaagctcttgaattgt
caagaatttgctgtagacttggagcatcactcttacaggagcttcctggggctgacctgc
ctgatgcagatttccacccgcacagaagacttcatcgttgacaccctggagcttcgaagt
gacatgtacattctcaatgagagcctcacagacccagctattgttaaggtcttccatggt
gctgattcagacatagaatggctgcagaaggatttcgggttatatgtggtgaacatgttt
gatacccatcaggcagcacgccttctcaacctgggcaggcactccctcgatcacctgctg
aagctctactgcagtgtggagtcaaacaagcagtatcagctggctgattggagaatacga
cctctgcctgaggaaatgctcaactacgcccgggatgacactcattacctgctttacatt
tacgataaaatgaggctggaactgtgggagcgaggcaatgagcagcccgtccagctgcag
gtggtgtggcagcggagcagggacatctgcctcaagaaattcatcaaacctatcttcacg
gatgaatcttaccttgaactatacaggaagcaaaagaagcacctcaacacgcagcagctg
acggcctttcagctgctgtttgcctggagggacaagacagctcgccgggaggatgaaagt
tatggatatgtcctgccaaaccacatgatgctaaagatagctgaagagctgcctaaggaa
cctcagggcatcatagcttgctgtaaccctgtaccaccccttgtacggcagcagatcaat
gaaatgcatcttttaattcagcaggcccgggagatgcctctgctcaagtctgaagtcgca
gctggagcgaggaggagcgggccgcagcccacccctgagagattggagaacgttctcttt
ggccctcacgactgctcccacgccccgtcagatggctatcctctcgtcccagccagcgga
cctgagccagcgcagaaacaggacggcctcctccccggccgagaagacggggaggctctg
ctggacaccagatgcctcatcgccaccgctgtcatcacgttgtttaacgaacctagtgct
gaagaaaacggaaggngtccattaaccacagcacagaagaaagcccggaacataatggag
tcctttgaaaatccatttaggatgtttctgccttcactagaacaccgggctcatatttct
caggccgcaaagtttgatccgtcatcaaaaatctatgaaatcagcaaccgctggaagctg
gcaagccaggtacaggtacaaaaagagtctaaagaacttgccaagaagaaggcagctgag
cgaacagccgcccgggaccaggccgaggaggagtataaagcaacagcggagcaggccgtg
tctgtccgccagcaggccgccctagagaacactgccaagaagagagagcggacaacgagt
gatccaaggacgacagaacagaaacaggagaagaaacgactgaaaacttccaagaagcca
aaagacccagatccaccagaaaaagagtttaccccttacgactacagcaagtcggatttc
aaggcttttgctggaaacagcaaatccaaaccgtctccccagtttgacccaaataagcag
ccccagtccggcaagaaatgccttgcagccaaaaaaattaaacagtcgatgggaaacaaa
agcatgtcctttccaacgggaaagtcagacagaggtttcaggcacagttggccaaagaga
tag
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integrated database retrieval system
