Vicugna pacos (alpaca): 102529353 Help Entry 102529353         CDS       T08098                                  Symbol SKIV2L Name (RefSeq) helicase SKI2W   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism vpc  Vicugna pacos (alpaca) Pathway vpc03018   RNA degradation Brite KEGG Orthology (KO) [BR:vpc00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     102529353 (SKIV2L)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:vpc03019]     102529353 (SKIV2L) Enzymes [BR:vpc01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      102529353 (SKIV2L) Messenger RNA biogenesis [BR:vpc03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      102529353 (SKIV2L)   mRNA degradation factors    3'-5' decay     Ski complex      102529353 (SKIV2L) SSDB OrthologParalogGFIT Motif Pfam:  DSHCT Ski2_N MTR4_beta-barrel DEAD MTR4-like_stalk DEXQc_Suv3 Helicase_C ResIII DUF3516 Motif Other DBs NCBI-GeneID:  102529353 NCBI-ProteinID:  XP_006215416 UniProt:  A0A6I9IPE4 LinkDB All DBs Position 20 AA seq 1246 aa AA seqDB search MLETERLVLPPPDPLDLPLRAVELGCTGRWELLNVPGAPESTLPHGLPPCAPDLQQEAEQ LFLSSPAWLPLHGVEHSARKWQRKMDPWSLLATLGAPVPSDLQAQRHPTTGQILGYKEVL LENTNLSATTSLSLRRPPGPISQSLWGNPTQYPFWPGGMDEPTITDLSTREEAEEEIDFE KDLLTVPPGFKKGVDFAPKDHQAPAPGLLSLSRLLEPLDLGGGEEDESEAVGQPRGPRGD TVSASPCSAPLARASSLEDLVLKEASTAVAPPEPSKPLPQEQWAIPVDVTSPVGDFYRLI PQPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTS PIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWV IFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVIST VARPVPLEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEAKKERMSKHAQTFGAKQ PTHQGGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEI HLFLQRCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLF ATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCK GRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSK AHEQALAELTKRLETLEEPDMTGQLVDLPEYYSWGEELTETRSLIQRRIMDSVNGLKSLS VGRVVVVKSQEHHNALGVILQVSSNSTSRVFTTLVLCEKPVSEDPQERGPASPVVPYPDD LVGFKLFLPEGPCDHTVAKLQAGDVAAITTKVLRVNGEKILEDFSRRQQPKFKKDPPSAA VTTAVQELLRLAQAYPAGPSTLDPVNDLQLKDVSVVEGGLRARKLEDLIQGVQCVHSPRF PAQYLKLQERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRV ACAMSSHELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGDQLPSTLKQGVECVRA VAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCI QRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLYTQ NT seq 3741 nt NT seq  +upstreamnt  +downstreamnt atgttggagacggagcgacttgtgctacctcccccggatcccctggacctgccccttcgg gccgtggaattgggatgcacagggcgctgggagctgctgaatgtgcctggggctccagag agcacccttccccacggcctccctccctgtgccccagatctgcagcaagaagcagagcag ttgtttctgtcatctccagcctggctgcctttacatggtgtggagcactcagcccgaaaa tggcagagaaagatggatccctggtctctcctggccacactgggtgccccagtcccctcc gacctacaggcccaaagacacccaaccacaggccagatactgggctacaaggaggtcttg ttggagaatacaaacctgtcggccacgacctccttgtctcttcgccggccaccagggccc atctcccagtccctgtgggggaatccaacacagtaccctttctggccaggtggaatggat gagcccaccataacagatctgagcactcgggaggaggctgaggaggagatagactttgag aaagatcttcttactgttccacctggtttcaagaaaggcgtggactttgcaccaaaggat caccaagctccagctcctgggttgctcagcctcagccgtctgctggagcccctggatttg ggcgggggtgaagaggatgagagtgaggctgtgggacagcccagaggtcccagaggggac actgtttcagcctctccctgcagtgctcccttggcccgagcaagcagcttggaggaccta gtgttgaaggaagcgtccacggctgtagcccccccagagccttccaagcccctacctcag gagcagtgggctatccctgtggatgtcacctcccctgttggtgatttctaccgcctcatt ccccagccagccttccagtgggcatttgaaccagatgtgtttcagaaacaggccatcctg cacttggaacggcacgactcagtctttgttgcggctcacacatccgcagggaagacagtt gtggctgaatacgctattgcccttgcccagaaacacatgacgcgcaccatctatacctcg cccatcaaggccctgagcaaccagaagttccgagacttccgaaacacatttggggatgtg ggactgctcacaggggacgtgcagctgcacccagaggcctcttgcctcattatgacaaca gagatccttcgctccatgctgtacagcggctcggatgtcatccgggacctggagtgggtc atctttgatgaggttcactacatcaacgatgctgagcgcggggttgtgtgggaggaggtg ctgatcatgctccctgaccatgtttccatcatccttctgagtgctactgtccccaacgcc cttgaatttgctgactggatcgggcggctgaagcgtcgccagatctacgtcatcagcact gttgctcgccctgtccccctggagcattatctcttcacgggcaacagtcccaagacccag ggggagctcttcctgctgctggactcgcggggcgccttccacacgaaggggtactacgcg gctgtggaggccaagaaggagcggatgagcaaacatgcccagacctttggggccaagcag cccacgcatcagggggggcccgcacaggaccgtggcgtgtacctgtccctcctggcctcc ctccgtacccgtgctcagctgcccgtagtggtgttcaccttctcccggggccgctgtgac gagcaggcctcaggcctcacctccctggacctcactacgagttcagagaagagtgagatt cacctcttcctgcagcgctgcctcgctcgcctccgaggctctgaccgccagctgccccag gtcctgcacatgtctgagctcttgcaccgcggcctgggcgtgcaccacagtggcattctg cccatccttaaggagatcgtggagatgctgttcagccgcggcctggtcaaggtcttgttt gccacagagacctttgccatgggtgtaaatatgccagcccgaacggtggtgtttgactcc atgcgcaagcacgacggctccaccttccgggacctgctccctggggagtacgtgcagatg gcaggtcgggcagggcgcaggggcctggaccccacaggcactgtcatcctgctctgcaag ggccgcgtgcccgagatggcagacctgcaccgcatgatgatggggaagccgtcccagctg cagtcccagttccgcctcacatacaccatgatcctcaacctgctgcgggtggatgctctc agggtggaagacatgatgaagaggagcttctctgagtttccatcccgcaaggacagcaag gcccatgaacaggctctggctgaactgaccaagaggctggagaccttggaggagcctgac atgactggccagctcgttgacctgcctgagtattacagctggggggaggaactgacggag acccggagcctgatccagcgacgcatcatggactctgtgaatgggctgaagtctctctcc gtgggaagggtggtggtcgtgaagagtcaggagcatcacaacgcgctgggcgtgatcctt caggtctcttcaaattccaccagcagagtattcacaactctggtcttgtgtgagaaacct gtgtctgaggacccacaggagagggggccagcctcccctgttgtgccctatccagatgac cttgtaggattcaagctgttcctgcctgaagggccctgcgaccacactgtggccaagctc caggcaggagatgtggctgccatcaccaccaaggtgctccgggtgaatggggagaagatc ttggaggacttcagcaggaggcagcaaccaaaattcaagaaggatcctccctctgcggcc gtgacaactgctgttcaggaactgctacgtctggctcaggcctacccagcaggaccctct acccttgaccctgtcaatgacctgcagctcaaggatgtgtcagtggtagaggggggcctc cgggcccggaagctggaggacctgatccagggggttcagtgtgtgcacagtccccgtttc cctgcccagtacctgaagctgcaggagcgaatgcagatacagaaggagatggagcggctg cgcttcctgctgtcggatcagtccctgctgctgctccccgagtaccaccagcgagtagag gtgctccgaactctggggtacgtagacgaggcgggcactgtgaagctggcagggcgggtg gcttgtgccatgagcagccatgagctgcttctcaccgagctcatgttcgacaatgcactg agcgccctgcggcctgaggaaattgcagccctgctctctggcctggtttgccagagccct ggcgaccctggggatcagctccccagcaccctcaaacagggggtggaatgtgtccgagct gtggccaagcggattggtgaggtccaagtggcctgtggcctgaaccagacagtggaggaa tttgtgggggagctgaattttgggctggttgaggttgtgtacgagtgggcccggggcatg cccttctctgagttggcggggctctcggggacccccgagggcctggtggtccgctgcatc cagcgcctggccgagatgtgtcgctcacttcggggggcagcccgcctggtaggcgagcct gtgctaggtgccaagatggagacggcggccaccctgctacggagggacatcgtcttcgcg gccagcctctacactcagtga

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