Vicugna pacos (alpaca): 102529462 Help Entry 102529462         CDS       T08098                                  Symbol MSH6 Name (RefSeq) DNA mismatch repair protein Msh6   KO K08737   DNA mismatch repair protein MSH6 Organism vpc  Vicugna pacos (alpaca) Pathway vpc01524   Platinum drug resistance vpc03430   Mismatch repair vpc05200   Pathways in cancer vpc05210   Colorectal cancer Brite KEGG Orthology (KO) [BR:vpc00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     102529462 (MSH6)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     102529462 (MSH6)   09162 Cancer: specific types    05210 Colorectal cancer     102529462 (MSH6)   09176 Drug resistance: antineoplastic    01524 Platinum drug resistance     102529462 (MSH6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:vpc03400]     102529462 (MSH6) DNA repair and recombination proteins [BR:vpc03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      102529462 (MSH6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_IV PWWP MutS_II HORMA Motif Other DBs NCBI-GeneID:  102529462 NCBI-ProteinID:  XP_015105183 UniProt:  A0A6J0AY44 LinkDB All DBs Position Unknown AA seq 1263 aa AA seqDB search MEGYPWWPCLVYNHPFDGTFIREKGKSARIHVQFFDDSPTRGWVSRRLLRPYTGSKSKEA QKGGHFYSAKPEILRAMQRADEALNKDKIKRLELAVCDEPSEPEEEEEMEAGATYASDKS EEENEIESEEEVQPKVQGSRRSSRQIKKRRVISDSESDIGGSDVEFKPDAKEEGSSDEIS SGVGDSDSEGLDSPVKVAPKRKRMITGNGSLKRKTSRKEMPSATKRATGISSETKSTLSA FSAPQNSESQTHISGGCDDSSRPTVWYHETLEWLKEEKRRDVHRRRPDHPDFDASTLYVP EDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYHMDALTGVNELGLVFMKGNWAHS GFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCRKMAHISKYDRVVRREICRVITK GTQTYSVLEGDPSENYSKYLLSLKEKEEDSSGHTRVYGVCFVDTSLGKFFIGQFSDDRHC SRFRTLVAHYPPVQVLFEKGNLSTETKMILKGSLSSSLQESLMPGSQFWDAAKTLRTLVE EGYFTDNLNEGSGVMLPQVLKAMTSESDSIGLTPGEKSELALSALGGCVFYLKKCLIDQE LLSMANFEEYVPLDSDMVSATRPGAFFAKANQRMVLDAVTLNNLEIFLNGTNGSTEGTLL EKIDTCHTPFGKRLLKQWLCAPLCNPYAINDRLDAIEDLMIVPDKTSEVADLLKKLPDLE RLLSKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVICKIVEIMEEVV DDFKSKILKQIITLQTKTPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDPDYDQ ALADIRENEQSLLEYLEKQRSRIGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKST KKGCKRYWTKTIEKKLASLINAEERRDVSLKDCMRRLFYNFDKNYKDWQAAVECIAVLDV LLCLANYSQGGDGPMCRPVILLPEEDTPPFLDLKGSRHPCITKTFFGDDFIPNDILIGCK EEEEENGQAYCVLVTGPNMGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLG ASDRIMSGESTFFVELSETASILTHATAHSLVLVDELGRGTATFDGTAIANAVVKELAEN IKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECEDPSQETITFLYKFIKGACPKSY GFNAARLANLPEEVIRKGHRKAREFEKMTQSLRLFREVCLASSERSTVAAGTVRKLLTLI EDL NT seq 3792 nt NT seq  +upstreamnt  +downstreamnt atggagggttacccctggtggccttgcctggtttacaaccacccttttgatggaacattc atccgtgagaaaggaaagtccgcccgcattcatgtacagttttttgatgacagcccaacg aggggctgggttagcagaagattattaaggccatatacaggttcaaagtcaaaggaagcc cagaaaggaggtcatttttacagtgcaaagcctgaaatactcagagcaatgcaacgtgca gatgaagccttgaataaagacaagattaagaggcttgaattggcagtctgtgatgagccc tcagaaccagaggaggaagaagagatggaggcaggtgcaacttacgcatcagataagagc gaagaagaaaatgaaattgagagtgaagaggaagtgcagcctaaggtgcaaggatccagg cgaagtagccgccagataaaaaaacgaagggtcatatcagactccgagagtgacattggt ggctctgacgtggaattcaagccggatgctaaggaggaaggaagcagtgatgaaatcagc agtggagtgggggatagtgacagtgaaggcttggacagccctgtcaaagttgctccaaag cggaagagaatgataactggaaatggctccctcaaaaggaaaacttcaaggaaagaaatg ccctcagccaccaaacgagcaactggtatttcctcagaaaccaagagtactttgagtgct ttctctgcccctcagaattctgaatcccaaacccacattagtggaggatgtgatgacagt agtcgccccactgtctggtatcatgaaactttagagtggcttaaggaggaaaagaggaga gatgtgcacaggaggcgacctgatcaccctgattttgatgcatccacactctatgtgcct gaggatttccttaattcctgtactcctgggatgaggaaatggtggcagattaagtcccag aactttgatcttgtcatattttataaggtggggaagttttatgagctgtaccacatggat gcccttactggagtcaatgaattggggctggtattcatgaaaggcaactgggcccattct ggtttccctgaaattgcatttggccgatactcagattccctggtccagaagggctataaa gtagcacgagtggaacagactgagaccccagaaatgatggaggcacgatgccgaaagatg gcacatatatctaagtatgatagagtggtgaggagagagatctgtagggtcattaccaag ggtacacagacttacagtgtgctagaaggtgacccctctgagaactacagtaagtatctt cttagcctcaaagaaaaagaggaggattcttctggccacacgagagtgtatggtgtatgc tttgttgatacttcacttggaaagttcttcataggtcagttttcagatgaccgccattgt tccaggtttaggactctcgtagcacactatccaccagtacaagtcttgtttgagaaagga aatctctcaacggaaactaagatgattctgaaaggttcgttatcttcttctcttcaggaa agtctgatgccaggctcccagttttgggatgcagccaaaactttgagaactctcgttgaa gaagggtattttacagacaacttaaatgagggcagtggggtcatgttaccccaggtgctt aaagccatgacctcagagtctgattctattgggttgacaccaggagagaagagtgaattg gccctctctgctctcggtggctgtgtcttctacctcaaaaaatgccttattgatcaggag cttttatcaatggctaattttgaagaatatgtccccttggattctgacatggtcagtgct acaagacctggtgctttctttgctaaagccaatcaacgtatggtgctagatgctgtgaca ttaaacaacttggagatttttctgaacggaacaaatggttctactgaagggaccctacta gagaagattgatacttgccatactccttttggtaagcggctcctaaaacaatggctttgt gccccactctgtaacccttacgctatcaatgatcgtctagatgccatagaagacctaatg atagtgcctgacaaaacctctgaggttgcagaccttctaaagaagcttccagaccttgag agactactgagtaaaattcataatgttgggtctcccctgaagagccagaaccaccctgat agcagggctataatgtatgaagaaaccacatacagtaaaaaaaagattattgattttctt tctgctctggaaggattcaaagtaatatgtaaaattgtggagattatggaagaagttgtt gatgactttaagtctaaaatcctcaagcagatcatcactctgcagacaaaaactcctgaa ggccgctttcctgatttgactgtagaactgaaccgatgggatacagcctttgaccatgaa aaggctcgaaagactggattgattactcccaaagcaggatttgacccagattacgaccaa gctcttgctgacataagagaaaatgaacagagcctcttggaatacttggagaaacagcgc agtcgaattggctgtagaaccatagtctactggggaattggtaggaatcgttaccagttg gaaattccagagaatttcatcacccgtaatttgccagaagaatatgagttgaaatccaca aagaagggctgtaaacgatactggaccaaaacaattgagaagaagttggctagtctgata aatgctgaagaacggagagacgtatctttgaaggactgcatgcggcgactattctataac tttgataaaaactacaaggactggcaggctgctgtagagtgcatcgcagtgttggatgtc ttactgtgcctggctaactacagtcaagggggtgatggtcctatgtgtcgtccagtaatt ctgctgccagaagaagatactcctcccttcctagaccttaaaggatcacgtcatccctgc attacaaagactttttttggtgatgactttattcctaatgacattctaataggctgtaag gaagaagaggaggaaaatggccaagcttattgtgtgcttgttactggaccaaatatgggg ggcaagtctacactcatgagacaggctggcctgttagctgtaatggcccagatgggttgt tatgtaccagctgaagtttgtaggctcacaccaatcgatagagtgtttactagactcggt gcctcagacagaataatgtcaggtgaaagtacattttttgttgaattgagtgaaactgcc agtatacttacacatgcaacagcacattctctggtgcttgtggatgaattaggaagaggt actgcaacatttgatgggacagccatagcgaatgcagttgttaaggaacttgctgagaat ataaagtgtcgtacactgttttctacccactaccattcattagttgaagactattctcaa aatgttgcagtgcgcctaggacacatggcatgcatggtagaaaatgaatgtgaagatccc agccaggaaactattacctttctctataaattcattaaaggagcttgtcctaaaagctac ggctttaatgcagcaaggcttgctaaccttccagaggaggttattcgaaagggacataga aaagcaagagaatttgagaagatgactcagtcactgcgattatttcgggaagtttgtctg gctagtagtgaaaggtcgactgtagctgctggaactgtccgtaagttgctgactttgatt gaggacttatag

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