Vicugna pacos (alpaca): 102529589
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Entry
102529589 CDS
T08098
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102529589 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpc03019
]
102529589 (BARD1)
04121 Ubiquitin system [BR:
vpc04121
]
102529589 (BARD1)
03036 Chromosome and associated proteins [BR:
vpc03036
]
102529589 (BARD1)
03400 DNA repair and recombination proteins [BR:
vpc03400
]
102529589 (BARD1)
Messenger RNA biogenesis [BR:
vpc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
102529589 (BARD1)
Ubiquitin system [BR:
vpc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
102529589 (BARD1)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
102529589 (BARD1)
DNA repair and recombination proteins [BR:
vpc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
102529589 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_6
Ank_4
Ank
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
ANK_LRRK2
Ank_KRIT1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
102529589
NCBI-ProteinID:
XP_031534121
UniProt:
A0A6J3ANF4
LinkDB
All DBs
Position
5
AA seq
776 aa
AA seq
DB search
MPGNRQLRVRSGNEHRPAPAMEPAGREVWAHSRAALDRLEKLLRCSRCTNILREPVCLGG
CEHIFCSNCVCDCIGSGCPVCYTPAWIQDVKINRQLDSMIQLCSKLRNLLHDTDFSDLKE
ETSRKNLFSDAEYKKNSIKMWFSPRSKKVRYVVSKVSVQTRPPVINSQTAQQASMYEFVS
PSPPVDVSERAKKPSRRSGKKQKKKTLAEINQKWNLETGKEDGELASKEEFKEKLVSFCS
QPSVIASPQTNGEIDLLASGSPAESECFGSLTEVFLPLAEHIESPETESRNEVVTPEKTL
CENHLTAEKSLPSGHSGKRGRHNRLFSPVSKKCRNSVVSTSGNSVKETAQSENMPLPGCS
SPPSNKLKVGDTLRRKSSNILDESFSLSPGTPPSTLNSPSYRRMMCSPSATKLSHSSLTA
GKRNHRGETLLHVASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLQVVELLL
QHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRSAVNIFGLRPVDYADSEDVKS
LLLLPEKNASSSVSHCSAINTGQRRDGPLVLIGSGLSSEQQKMLNELTAILKAKKCAEFD
STVTHVIVPGDTVQSTLKCMLGILSGCWILKFEWVKVCLQRKEWEQEEKYEIPEGPQRSR
LNREQLLPKLFDGCYFYFGGTFKHHPKDNLTKLVAAAGGQILSRKPKPDSDVTQSISTVA
YHARPDSDQRFCTQYIIYEDLSNHRPERVRQGKVWMASSSWFIDCVMSFELLPLDS
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgccggggaaccggcagctgagggtccgctccgggaacgagcatcgtcccgcgcccgcc
atggagccggcaggtcgcgaggtctgggcccacagccgcgcggcgctcgaccggctggag
aaactgctgcgctgctcgcgctgcactaatattctgagggagcctgtgtgcttaggagga
tgtgagcacatcttctgtagtaattgtgtatgtgactgcattggaagcggatgtccagtg
tgttataccccagcctggatacaagatgtgaaaataaatagacaattggacagcatgatc
cagctttgtagtaagcttcgaaacttgctacatgacactgatttttcagatttgaaagaa
gaaacatctaggaagaatttatttagtgatgcagaatataagaagaattcaataaaaatg
tggtttagtcctcgaagtaagaaggtcaggtatgttgtgagtaaagtttcagtgcaaacc
cgtcctcctgtgataaacagtcaaactgctcagcaggcctccatgtatgagtttgtctct
ccaagccctccggtggatgtttctgagagggctaagaagccttccagaagatctggaaaa
aagcagaaaaagaaaactttagctgaaatcaaccagaagtggaatttagagacagggaag
gaagatggtgaacttgcctccaaagaggaatttaaggaaaagctggtatccttctgtagc
cagccgtctgtcattgctagtcctcagacaaacggtgaaatagacttactagcgagtggc
tcccctgcagaatctgagtgttttggaagtttaactgaagtctttttaccattggctgag
cacattgagtctccagaaactgagagcaggaatgaagtagtgactcctgagaagactctc
tgtgaaaatcatcttacagctgagaagtccttgccatcaggtcacagtgggaaacgtggg
cgtcacaacagacttttcagtcctgtttctaagaaatgtaggaacagcgttgtgagcacc
agtggaaattctgttaaggaaacggcacagtcagaaaacatgccattacccggatgttct
tcaccaccttcaaacaaactgaaagttggtgacacattaaggaggaagagcagtaatata
ttagatgaatcttttagcctttcaccaggtacgcccccttctacactgaatagtccaagt
tacagacgaatgatgtgtagcccctcagcaacgaagctgtcgcacagtagccttacagct
gggaaaagaaatcacagaggagagactttgctccatgttgcttccattaagggtgacata
ccttctgttgaatacctcttgcaaaatggaagtgacccaaatgttaaagaccatgctgga
tggacaccactgcatgaagcctgcaatcatgggcacctgcaggtggtggaattgttgctc
cagcacaaggcgctggtgaacaccaccgggtatcagaatgactcaccccttcacgatgca
gccaagaatgggcacgtggatatagtcaaactgttactttcctatggagcctccagaagt
gctgtgaacatatttggtctgcggcctgtggattacgcagacagtgaagacgtgaaatcg
ctgttgctgctgccagagaagaatgcgtcatcttcagttagccactgctcagcaataaac
actggtcagcgtagggatggaccccttgtacttataggcagtgggctttcttcagaacaa
cagaaaatgctcaacgagcttacagcaattctaaaggctaaaaaatgtgctgagtttgat
agtacagtaactcatgtcattgttcctggtgatacagttcaaagcaccctgaagtgtatg
cttgggattctcagtggatgctggatcctaaaatttgaatgggtgaaagtgtgtctacaa
agaaaagagtgggaacaggaagaaaagtatgaaattcctgaaggaccacagagaagcagg
ctcaacagagaacagctgttaccaaagttgtttgatggatgctacttctattttggtgga
accttcaaacaccatccaaaggacaaccttactaagctggtcgctgcagctgggggccag
atcctcagcagaaagcccaagccggacagtgacgtgacccagagcatcagcacagtcgcg
taccatgccagacctgattctgaccagcgcttctgcacacagtatatcatctatgaagat
ttgtctaatcatcgcccagagagagttcggcagggcaaagtctggatggcttcttccagc
tggtttatagattgtgtgatgtcctttgagttgctccctcttgacagttga
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integrated database retrieval system
