Vicugna pacos (alpaca): 102530071
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Entry
102530071 CDS
T08098
Symbol
SMC4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vpc03036
]
102530071 (SMC4)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
102530071 (SMC4)
Condensin II
102530071 (SMC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
Mce4_CUP1
ABC_tran
ATG17_like
Motif
Other DBs
NCBI-GeneID:
102530071
NCBI-ProteinID:
XP_006200919
UniProt:
A0A6I9I167
LinkDB
All DBs
Position
1
AA seq
1288 aa
AA seq
DB search
MPRKGTQPSTARRREEGPPQSPDGTSSDMEPEPPPGRAGSPAPATAETPSEEIDNRSLEE
ILNSIPPPPPPAMTNEAGAPRLMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKS
NVIDSMLFVFGYRAQKIRSKKLSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVVPN
SNFYVSRTAYRDNTSVYHISGKKRTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKP
KGQTEHDEGMLEYLEDIIGCGRLNEPIKVLCRRVEILNEHRGEKLNRVKMVEKEKDALEG
EKNIAIEFLTLENEIFRKKNHVCQYYIYDLQKRIAEMETQKEKIHEDTREINEKSNILSN
EMKAKNKAVKDVEKKLNKITKFIEENKGKFTELDLEDVQVREKLKHATSKAKKLEKQLQK
DKEKVEEFKGIPAKSETIITEATTRNNALEKEKEKEEEKLKEVMDNLKQETQGLQKEKES
REKELMGFSKLVNEARSKMDVAQSELDIYLSRHNTAVSQLSKTKEALMAASETLKERKAA
IGDIEAKLPQTESELKEKEKELQKVTQEEIHFKSLVHDLFQKVEEAKSSLAMNRSRGKVL
DAIIQEKKSGRIPGIYGRLGDLGAIDEKYDVAISSCCHALDHIVVDSIDTAQECVNFLKR
HNIGVATFIGLDKMAVWAKKMTRIQTPENTPRLFDLVKVKDEKIQQAFYFALRDTLVADN
LDQATRVAYQKDRRWRVVTLQGQIIEQSGTMTGGGSKVMKGRMGSSVVVEISEEEVNKME
LQLQRDSQKAVQIQEQKVQLEEAVVKLRHSEREMRNTLEKFTASIQRLSEQEDYLNVQVK
ELEANVLATAPDKRKQKLLEENVSAFKTEYDNVAERAGKVEAEVKRLHNIIVEINNHKLK
AQQDKLDKINKQLDECASAITKAQVAIKTADRNLKKAQDSVFRTEKEIKDTEKEVNDLTA
ELKSLEDKATEVIKNTNAAEESLPEIQKEHRNLLQELKVIQEHEHALQKDALSIKLKLEQ
IDGHISEHNSKIKYWQKEIAKISLHPIEDNPVEEILVLSPEDLEAIKNPDAITNQIALLE
AQCHEMKPNLGAIAEYKKKEELYLQRVAELDRITNERDNFRQAYEDLRKQRLNEFMAGFY
VITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSS
LALVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISD
RLIGIYKTYNITKSVAVNPKEIASKGLC
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtaaaggcacccagccctccactgcccggcgcagagaggaagggccgccgcag
tctccggacggcaccagcagcgacatggagcccgaaccgccgcccggccgcgcggggagc
ccggcgcctgccaccgcagagactccaagtgaggaaattgataatagaagtttagaagag
attttgaatagcatccctcctcccccgcctccagcaatgaccaatgaagctggagcgcct
cggcttatgataactcatattgtaaaccagaacttcaaatcctatgctggggaaaaaatt
ctgggacctttccataagcgcttttcctgtattattgggccaaatggcagtggcaaatcc
aatgttattgattctatgctttttgtatttggctatcgagcacaaaaaataagatctaaa
aaactctcggtattaatacacaattctgatgaacacaaggatattcagagttgtactgta
gaagttcattttcaaaagataattgataaggaaggagatgattatgaagtcgttcctaac
agtaacttctatgtatccagaacggcctacagagataatacttctgtttatcacataagt
ggaaagaagaggacatttaaggatgttggaaatcttcttcgaagccatggaattgacctg
gaccataatagatttttaatcttacagggtgaagttgaacaaattgctatgatgaaacca
aaaggccaaacagaacatgatgagggtatgcttgagtatctagaagatataattggttgt
ggacggctaaatgaacctattaaagtcttgtgtcggagagttgaaatattaaatgaacac
agaggagagaagttaaacagagttaaaatggtggagaaggaaaaggatgccttagaagga
gagaaaaacatagccattgaattccttaccttggaaaatgaaatatttagaaaaaagaat
catgtttgtcaatattacatttatgatctgcagaaacgaattgctgaaatggaaactcaa
aaggaaaagattcatgaagataccagagaaattaatgagaagagcaatatactgtcaaac
gaaatgaaagctaagaataaagctgtaaaggatgtagagaagaagctgaataaaattaca
aaatttattgaggagaacaaaggaaaatttacagagctagatttggaagatgttcaagtt
agggaaaaattaaaacatgctacaagtaaagccaaaaaactggagaaacaacttcagaaa
gataaagaaaaggttgaagaatttaaaggtatacctgccaagagtgagactatcataact
gaggcaacaactagaaacaatgcccttgagaaggaaaaagaaaaagaagaagaaaaatta
aaggaagttatggataaccttaaacaggaaacacaagggcttcagaaagaaaaagaaagt
cgagagaaagaacttatgggtttcagcaaattggtaaatgaagcgcgttcaaagatggat
gtagcccagtcagaacttgatatctatctcagtcgtcataatactgcagtgtctcaatta
agtaagaccaaagaagctctaatggcagcttctgagactctcaaagaaaggaaagctgca
attggagatatagaggcaaaactccctcaaactgaaagtgaactaaaggagaaagaaaaa
gaacttcaaaaagttacacaagaagaaatacatttcaaaagtttggttcatgatcttttt
caaaaagttgaagaagcaaagagttccttagcaatgaatcgaagtagagggaaagtcctt
gatgcaataattcaagaaaaaaaatctggcaggattccaggaatatatggtagattgggg
gacttaggagcaattgatgaaaaatacgatgttgcaatttcatcctgttgtcatgcatta
gaccacattgttgttgattctattgatacagcccaagaatgtgtaaacttccttaaaaga
cacaatattggagttgcaacctttataggtttggataagatggcagtgtgggcaaagaaa
atgaccagaattcaaactcctgaaaatacacctcggttatttgatttagtaaaagtaaaa
gatgagaaaattcagcaagcattttactttgctttacgggataccttggtagctgacaac
ttagatcaagccacaagagtagcttatcagaaagacagaagatggagagtggtaacatta
caggggcagatcatagaacagtcaggtacaatgactggcggtggaagcaaagtaatgaaa
ggaagaatgggttcatcagttgttgttgaaatctccgaagaagaggtaaataaaatggaa
ttacagttgcagagagactctcaaaaggcagtgcaaatccaggaacagaaagtacaactg
gaagaagcagtagttaagttaaggcatagtgaacgagaaatgaggaatacattagaaaag
ttcactgcaagcatccagcgtttatcggagcaagaagattatttgaatgtccaagttaag
gaacttgaagctaatgttcttgctacagcccctgacaaaagaaagcagaaattgctagaa
gaaaatgttagtgctttcaaaacagaatatgacaatgtggctgagagagctggtaaagtg
gaagctgaggttaaaagattacacaatatcatcgtagaaattaataaccataaacttaag
gcccaacaagacaaacttgataaaataaataagcagttagacgaatgtgcttctgctatt
actaaagcccaagtagcaatcaagactgctgacagaaatcttaaaaaagcacaagactct
gtctttcgcacagagaaagaaataaaagatactgagaaagaagtaaatgacttaacagca
gagctcaaaagtcttgaggacaaagcaacagaggtcataaagaatacaaatgctgcagag
gagtccttaccagagatccagaaagaacatcgtaacctacttcaagaactaaaagtaatt
caagaacatgaacacgctcttcaaaaagatgcacttagtataaagttgaaactcgaacaa
atagatggtcacattagtgaacataattctaaaataaaatattggcaaaaagagattgca
aaaatatcattgcatcccatagaagataatcctgttgaagagattttagttctaagccca
gaggatcttgaagcaatcaaaaacccagacgctataacaaatcagattgcgcttttggaa
gctcagtgtcatgaaatgaaaccaaaccttggtgccattgcagagtataaaaagaaggag
gagttatatttacaacgggtagcagaattggacagaattactaatgaaagagataatttt
agacaggcatatgaggatcttcggaaacaaaggcttaatgaattcatggcaggtttttat
gtaataacaaataagttaaaggaaaattaccaaatgcttactttgggaggtgacgctgag
ctggagcttgtagacagcttggatcctttctctgaaggaatcatgttcagtgttcgacca
cctaagaaaagttggaagaagatcttcaacctttcaggaggagagaaaacgcttagttca
ttggctttagtatttgctcttcaccactacaaacccactcctctgtacttcatggatgag
attgatgcagcccttgatttcaaaaatgtgtccattgttgcattttacatatatgaacaa
acaaaaaatgcccagttcataataatttctcttcgaaataatatgtttgagatttcagat
agacttattggaatttacaagacatacaatataacaaaaagtgttgcagtaaacccaaaa
gaaattgcatctaaaggactttgttaa
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