Vicugna pacos (alpaca): 102530248
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Entry
102530248 CDS
T08098
Symbol
LRFN1
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vpc04515
]
102530248 (LRFN1)
04990 Domain-containing proteins not elsewhere classified [BR:
vpc04990
]
102530248 (LRFN1)
Cell adhesion molecules [BR:
vpc04515
]
Immunoglobulin superfamily
SALM family
102530248 (LRFN1)
Domain-containing proteins not elsewhere classified [BR:
vpc04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
102530248 (LRFN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
ig
Ig_2
fn3
LRR_9
LRR_14
Ig_DSCAM-DSCAML_C
CbiM
C2-set_3
Sp38
Motif
Other DBs
NCBI-GeneID:
102530248
NCBI-ProteinID:
XP_006215105
UniProt:
A0A6I9INY9
LinkDB
All DBs
Position
11
AA seq
768 aa
AA seq
DB search
MAPGPFSSALFSLPPAALPFLLLLWAGASRGQPCPGRCICQNVAPTLTMLCAKTGLLFVP
PAIDRRVVELRLTDNFIAAVRRRDFANMTSLVHLTLSRNTIGQVAAGAFADLRALRALHL
DSNRLAEVRGDQLRGLGNLRHLILGNNQIRRVESAAFDAFLSTVEDLDLSYNNLEALPWE
AVGQMVNLNTLTLDHNLIDHIAEGTFVQLHKLVRLDMTSNRLHKLPPDGLFLRSQGPGPK
PPTPLTVSFGGNPLHCNCELLWLRRLTREDDLETCATPEHLTDRYFWSIPEEEFLCEPPL
ITRQAGGRALVVEGQAVSLRCRAVGDPEPVVHWVAPDGRLLGNSSRTRVRGDGTLDVTIT
TLRDSGTFTCIASNAAGEATAPVEVCVVPLPLMAPPPAAPPPLTEPGSSDIATPGRPGAN
ESAAERRLVAAELTSNSVLIRWPAQRPVPGIRMYQVQYNSSADDSLVYRMIPSTSQTFLV
NDLAAGRAYDLCVLAVYDDGATALPATRVVGCVQFTTAGDPAPCRPLRAHFLGGTMIIAI
GGVIVASVLVFIVLLMIRYKVYGDGDSRRVKGTSRSPPRVSHVCSQTNGAGAPQAPPPQD
RYEALREVASPATGAVAVEAKATAAEMASEEPEALLGRSLGGSATSLCLLPSEETSAEES
LAASGPRRSRSGALGPPAAAPPTLALVPGGAPARPRPQQRYSFDGDYGALFQSHSYPRRA
RRTKRHRSTPHLDGAGGGAAGEDGDLGLGSARARLAFTSTEWMLESTV
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggctccaggccccttctcctcggcgcttttctcgctgccgcctgctgccctgcccttt
ctgctgctcctctgggcgggggcatctcgaggccagccctgcccgggccgctgcatctgc
cagaacgtggcgcccacgctgaccatgctgtgcgccaagactggcctgctctttgtgcct
cctgctatcgaccggcgcgtggtggagctgcggctcactgacaacttcatcgccgccgtc
cgccgccgagacttcgccaacatgaccagcctggtgcacctcaccctctcccgaaacacc
atcggccaagtggcggccggcgcctttgcggacctccgcgccctccgcgccctgcaccta
gacagcaaccgcctggcggaggtccgaggcgaccagctccgcggcttgggcaacctccgc
cacctgatcctcggcaacaaccagatccgccgggtggagtcggccgccttcgacgccttc
ctgtccaccgtggaggatctggatctgtcttacaacaatctggaggccctaccgtgggag
gcggtaggccagatggtgaacctgaacacgctcacgctggaccacaacctcatcgaccac
atagccgaaggcacctttgtgcagcttcacaaactggttcgcctggacatgacctccaac
cgtctgcataaactgccccccgacgggctcttcctgaggtcccaaggtcccgggccaaag
ccgcccacgcccctcacggtcagcttcggcggcaaccccttgcattgcaactgcgagctg
ctctggctgcggcggttgacaagagaggacgacctggagacatgcgccactcctgagcac
ctcaccgaccgctacttctggtccatccccgaggaggaatttctgtgtgaacctccgtta
atcacacggcaggcaggtggccgggccctggtggtggagggccaggcggtcagcctgcgg
tgccgcgctgtaggtgaccccgagccagtggtgcactgggtggcacctgatgggcggttg
ctggggaactcgagccggacccgggtccggggggatgggacgctggatgtaaccatcacc
actttgcgggacagtggcaccttcacttgcatcgcctccaatgccgccggggaagccacg
gcaccggtagaggtgtgcgtggtgccgctgcctctgatggcgcccccacctgccgccccg
ccacctctcactgagcctggttcctcagacatcgccacacccggccgacctggtgccaac
gaatcggcggctgagcgccggctagtggcggcggagctcacctccaactctgtgctcatc
cgctggccagcccagaggcctgtgccaggcatccgcatgtaccaggtccagtacaacagc
tctgcagatgactcccttgtctacaggatgatcccatccaccagccagaccttcctggtg
aatgatctagcagctggtcgcgcctatgacctgtgcgtgctggccgtttacgacgatggg
gccacggcgctgccggccactcgagtggtgggctgcgtgcagtttaccaccgctggggat
ccggcgccctgccgcccactgagggcccatttcttgggcggcaccatgatcatcgccatt
gggggcgtcatcgtcgcctctgtcctcgttttcatcgttctgctcatgatccgctacaag
gtctacggcgatggggatagccgccgagtcaagggcaccagcaggtcgcctccgcgggtc
agccatgtgtgctcgcagaccaacggtgcaggcgcgccgcaggccccgcccccgcaagac
cgctacgaggcgctgcgtgaggtggcgtctccagctactggggccgtggctgtcgaggcg
aaggccacggcagccgagatggcttccgaggagccggaggcgctccttggacgctccttg
ggcggttcagccacctcgctgtgcctgctgccatccgaggaaacctccgcggaggagtcc
ctggccgcctcaggccctcggaggagccgttccggggccctgggaccgccggctgcggcc
cccccaactttagctctggttcctgggggagccccggctcggccgaggccacagcagcgc
tattcgttcgatggggactacggggcgctcttccagagccacagttacccgcgccgcgcc
cggcggacaaagcgccaccggtccacgccgcacctggacggggctggagggggcgcggcc
ggggaggacggagacctggggctgggctccgccagggcacggctggcctttaccagcacc
gagtggatgctggagagtaccgtgtga
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integrated database retrieval system
