Vicugna pacos (alpaca): 102530358
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Entry
102530358 CDS
T08098
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102530358 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpc03021
]
102530358 (POLR1B)
Enzymes [BR:
vpc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102530358 (POLR1B)
Transcription machinery [BR:
vpc03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
102530358 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RecQ_Zn_bind
Motif
Other DBs
NCBI-GeneID:
102530358
NCBI-ProteinID:
XP_006203893
UniProt:
A0A6I9I6U4
LinkDB
All DBs
Position
28
AA seq
1135 aa
AA seq
DB search
MDPGSRWRNLPSGPSLKHLTDPSYGIPREQQKPALQDLTRAHVESFNYAVREGLSHAVQA
IPPFEFAFKDERISLTIVDAVISPPTVPKGSICKELNVYPAECRGRRSTYRGKLTADISW
AVNGISKGTIKQFLGHVPIMVKSRLCNLYSLPPKALIEHHEEAEEMGGYFIINGIEKVIR
MLIMPRRNFPIAMVRPKWKTRGPGYTQYGVSVHCVREEHSAVNMNLHYLENGTVMLNFIY
RKELFFLPLGFALKALVNFSDYQIFQELIKGKEDDSFFRNSVSQMLRIVMEEGCCTQKQV
LNYLGERFRVKLSVPDWYPNEQAAEFLFDQCICIHLKSNTEKFYMLCLMTRKLFALAKGE
CVEENPDSLVNQEVLTPGQLFLMFLKEKLEAWLVSVKTAIDKKSQKTNVSLNTENLMKIF
TMGTDLTKPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFRCVHRGADFAK
MRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLSATCEVVTQFAYTASVPALLCSLGVT
PVDGAPHRPYSECYPVLLDGVMVGWVDKELAPGIADSLRHFKVLREKRIPPWMEVALIPM
TGKPSLYPGLYLFTTPCRLVRPVQNLELGKEELIGTMEQIFMNIAIFEDEVLPGVTTHQE
LFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTFQDRSDNKLYRLQTPQSP
LVRPYMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVYKSEFID
LSEKIKQGDDSLVFGVKPGDPRTLHKLDGDGLPFIGAQLQCGDPYYSYVNLNTGESFVTY
YKSKENCIVDNIKVCSNDTGSGRFKCICITMRIPRNPTIGDKFASRHGQKGILSRLWPVE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFTFSEENSALE
HFGEMLKAAGYNFYGTERLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVQCGSLLSPL
LEKPPPSWSALRNRKYSCTLCNRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDIV
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggatcccggcagccggtggcggaacctgcccagtgggcccagcctaaagcacttgacc
gacccctcttacgggatcccgcgggaacagcaaaagccagcgttgcaggacctaacgcgg
gcgcacgtcgagtccttcaactacgctgtgcgcgaggggctgagccacgcggtgcaggcg
atacctccctttgaatttgctttcaaagatgagcgtatctctcttacgattgtggatgct
gtcatcagtccacccacagttccgaaggggagcatctgcaaagagctcaacgtttatcca
gcagaatgccggggccggaggagcacctaccggggaaagctgaccgccgacatcagctgg
gcagtgaatggaatctcaaaaggaaccattaaacagttccttggccatgttcccatcatg
gtgaaatccaggctttgcaacttatacagccttcctccaaaagccctcattgagcaccac
gaggaagcagaggaaatgggaggctattttataatcaatggcattgaaaaagtcatccga
atgttaattatgcctcgccgaaatttccccattgcaatggtcagaccgaaatggaaaacc
agaggacctggctatactcagtatggagtttcagtgcactgtgtgagggaagagcattcc
gccgtcaacatgaaccttcactacttggaaaacggcacagttatgttgaactttatttac
cggaaagagctgttcttccttcctctgggatttgcgcttaaggcacttgtcaacttttcc
gattatcagatttttcaggagcttatcaaaggaaaggaggatgactctttctttaggaac
tcagtatcccagatgttaaggattgtaatggaagagggatgctgcacacaaaaacaggtc
cttaactacctgggtgaacgcttcagagtgaagctcagtgttcctgactggtacccaaat
gaacaagctgccgagtttctgtttgaccagtgcatctgtatccacttgaaatccaacact
gaaaagttctacatgctttgtctcatgacccggaagctctttgctttagccaaaggggag
tgcgtggaggagaatccggacagcttagtgaatcaagaagtcctgacacccggtcagctc
ttcctcatgtttctgaaggaaaaattggaagcttggttagtatctgttaaaacagccata
gataagaagtctcagaagaccaatgtgtccttgaacacggaaaatctcatgaagattttt
actatgggaacagaccttacaaaaccatttgaatatcttcttgctactgggaatctgcgt
tctaaaacgggtcttggcttcctgcaagattctggactttgcgttgtggccgacaagctg
aacttcatacgctatctctcccacttccgctgcgtgcacagaggggctgattttgccaag
atgaggaccaccacagtccgcaggctgctgcccgagtcctggggtttcctttgccccgtg
cacacccccgacggggagccctgtggtctgatgaaccacctgagcgccacgtgtgaggtc
gtcactcagtttgcgtacacagcgtctgttccggccctgctctgcagcctgggggtcact
ccagttgacggagcgccacatcgaccatacagcgagtgctaccctgtgctgctggacggg
gtcatggttggctgggtggacaaggagctggctcctggcatcgccgattctctccgacat
tttaaggtgttgagagaaaaaagaattcccccctggatggaggtggcccttatccccatg
acaggaaaaccaagtctctacccaggattgtacctttttaccaccccgtgtagactggtg
cggcctgtgcagaatttggaattaggcaaagaagagctgattggaactatggaacagatc
tttatgaacattgccatctttgaggatgaggtcctgcctggagttaccacccaccaggag
ctcttccctcacagcctgctgagcgtgatcgccaacttcatccctttctccgatcacaac
cagagtccgagaaacatgtaccagtgccagatgggtaagcagacgatgggctttcccctt
ctcacttttcaagaccgatcagataacaaactgtaccgtctccagactccacagagccct
ttagtgagaccatacatgtacgattattacgacatggataactacccaatcgggaccaat
gccattgttgctgtcatttcttacactggctatgacatggaagacgccatgattgtgaat
aaggcctcttgggagcgaggctttgcccatggaagtgtctacaagtccgagttcatagat
ctgtctgagaaaattaagcaaggagatgatagtctggtgtttggagtcaaacccggtgac
ccacggaccctgcataagctggatggcgatggcctgccgtttattggagcacagctgcag
tgcggagacccgtactacagctacgtcaacctcaacaccggggagagcttcgtgacctac
tataagagtaaagagaattgtattgtggataacatcaaagtgtgcagtaatgacaccgga
agtggcaggttcaagtgcatttgcatcacgatgagaatccctcggaacccaactatcggg
gataagtttgccagtcgtcatgggcagaagggcatcttgagcagactgtggcccgtggag
gacatgccgttcactgagagcgggatggtcccagacattctgttcaacccccacgggttt
ccatcccgcatgaccatcggtatgctgatcgagagtatggcagggaagtcggcggctttg
cacggcctctgccacgatgccacacccttcaccttctccgaggagaactctgccctggaa
cacttcggggagatgctgaaggctgccggctacaacttctatggcaccgagaggctgtac
agtggcatcagtgggctggagctggaggcagacattttcataggcgtggtctattaccag
cgcctacgccacatggtctcagacaaattccaagtgagaacaacaggagccagagacaaa
gtcaccaaccagcccattgggggaaggaacgtccagggtggaatccgttttggggagatg
gagcgggatgcccttttagcacacggtacatctttcctccttcacgaccgcctcttcaac
tgctcagatcgctcagtagcgcacgtgtgtgtgcagtgtggtagcttactctccccgctc
ctggagaagccccctccgtcttggtcggccctgcgcaacaggaagtacagctgtaccctg
tgtaaccgcagcgacaccatcgacacggtttctgtgccttacgtcttccggtattttgta
gctgaactggcagctatgaacatcaaagtaaaactggacatcgtttaa
DBGET
integrated database retrieval system
