Vicugna pacos (alpaca): 102530393
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Entry
102530393 CDS
T08098
Symbol
DDX21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vpc03009
]
102530393 (DDX21)
03036 Chromosome and associated proteins [BR:
vpc03036
]
102530393 (DDX21)
Enzymes [BR:
vpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102530393 (DDX21)
Ribosome biogenesis [BR:
vpc03009
]
Eukaryotic type
Pre-60S particles
Helicases
102530393 (DDX21)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
102530393 (DDX21)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Cas3-like_C_2
AAA_30
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
102530393
NCBI-ProteinID:
XP_006212998
UniProt:
A0A6I9IKU2
LinkDB
All DBs
Position
11
AA seq
775 aa
AA seq
DB search
MPGKLRSDADLESNTAVAKVEMPRKQNEKKGRKEKPKSTKSEEAAEEKEETVSPKAKKVK
KKAGPSEADMNSPKSKKPPKKEEPSQDDIISPKTKSAKKSKEPSEESVVSPKTKKVVKAE
EPSEEEMGAPKPKKTKKEKEMNGEIGEKSPKLKNGFPHSGPDSSSKEAASEESNSELEQE
IPVEQKEGAFSNFPISEETIKLLKARGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTF
SFAIPLIEKLQGELQERKRGRAPQVLVLAPTRELASQVSRDFSDITKKLAVACFYGGTPY
GGQIERMRNGIDILVGTPGRIKDHLQNGKLNLTNLKHVVLDEVDQMLDMGFADQVEEILC
VAYKKDSEDNPQTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAIKC
HWTQRAAVIGDVIRVYSGYQGRTIIFCETKKEAQELSQNAAVRQDAQSLHGDIPQKQREI
TLKGFRNGDFGVLVATNVAARGLDIPEVDLVVQSCPPKDVESYIHRSGRTGRAGRTGICI
CFYQHKEEYQLAQVEQKAGIKFKRIGVPSATEIIKASSKDAIRLLDSVPPTAIGHFKQSA
EKLIEEKGAVEALAAALAHISGATSVDQRSLINSDVGFVTMILRCSIEMPNISYAWKELK
EQLGEDIDSKVKGMVFLKGKQGVCFDIPTAAVTEVQEKWHDSRRWQLSVATEQPELEGPR
EGYRGFRGQREGNRGSWGQRGGNRNFRGQRSGGGNRSNRFQNKGQKRSYSKAFGH
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgccggggaaacttcgtagtgacgcggatttggagtcaaacacggccgtggcgaaagtg
gagatgccgcgaaagcaaaatgagaagaaaggtagaaaagagaagccaaaatctactaag
agtgaagaggcagcagaagaaaaggaagaaacagtttcccccaaagctaaaaaagttaaa
aagaaagcagggccttctgaggctgacatgaattctcctaaatccaaaaagccccccaaa
aaagaggagccatctcaagatgacattatttctcctaaaaccaaaagtgcgaaaaaatca
aaggagccctctgaagagagtgttgtttctcctaaaaccaaaaaagtagtaaaagccgag
gagccttctgaggaagaaatgggggctccaaagcccaagaagacgaagaaagaaaaggaa
atgaatggagaaattggagagaaaagccccaaactgaagaatggattccctcattctgga
cctgactctagctccaaggaagctgccagtgaagaaagtaacagtgagttagagcaggaa
atacctgtggagcagaaagaaggagctttctctaattttcccatatctgaagaaactatt
aaacttctcaaagcccgtggggtgaccttcctgtttcctatacaagcaaagacgtttcac
catgtctatagtgggaaggacttgattgcacaggcgcggacaggaactgggaagacattc
tcctttgccatccctttgattgaaaaacttcagggagaactgcaggaacggaagagaggc
cgtgcacctcaggtacttgttcttgcacctacaagggagttggcaagtcaagtaagcaga
gacttcagtgacattacaaaaaagttggcagtggcttgtttttatggtggaactccctat
ggaggacaaattgaacgcatgcggaatgggattgatatcctggttggaacaccaggtcgt
attaaggaccacctgcagaatggcaagctaaatctcaccaatcttaagcatgttgtcctg
gacgaagtcgaccagatgttggacatgggttttgctgaccaagtggaagagattttatgt
gtagcatacaagaaagattcagaagacaatccccaaacattgcttttttctgcaacttgt
cctcattgggtgtttaatgttgctaagaaatacatgaaatctacgtatgaacaggtggac
cttattggtaaaaagactcagaaaacggcaataactgtggagcatctggccatcaagtgc
cactggactcaaagggctgcagttatcggggatgtgatccgagtgtatagtggttatcaa
gggcgcactatcatcttctgtgaaaccaagaaagaagcccaggagttgtcacagaatgcg
gccgtaaggcaggatgcccaatcattacatggagacattccacagaagcaaagagaaatc
actctgaagggttttagaaatggtgattttggagttttggtggcgaccaatgtcgctgcg
cgtgggctagacatccctgaggttgatctggttgtacaaagttgtccaccaaaggatgtg
gagtcctacattcatcgttctgggcgaacaggtagagctggaaggaccgggatttgcatc
tgcttttatcagcacaaggaagaatatcagttagcacaagtggagcaaaaagcggggatt
aagtttaaacggataggcgttccttctgcaacagagataataaaagcttccagcaaagat
gccatcaggcttttggattctgtgcctcccactgccattggtcacttcaagcagtcagct
gagaaactgatagaggagaaaggggcggtggaagccctggcggcagccctggcccatatt
tcaggtgccacgtcagtagaccagcgctccttgatcaactcagacgtgggttttgtgact
atgatcttgcggtgctcaattgaaatgccaaacattagttatgcttggaaagaacttaaa
gaacagctgggtgaggatattgattccaaagtgaagggaatggtttttctcaaaggaaag
cagggtgtttgctttgatatccctactgcagcggtaacagaagtacaggaaaaatggcat
gactcaaggcgctggcagctctctgtggccacggagcaaccggagctagaaggtccacgg
gaaggatatcgaggcttcaggggacagcgggaaggcaatcgaggttcctggggacagcgg
ggaggaaacagaaacttcagaggtcagcgatcaggaggtggcaacagaagtaacagattc
caaaacaaaggccagaagcggagttacagtaaagcatttggacactaa
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