Vicugna pacos (alpaca): 102530484
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Entry
102530484 CDS
T08098
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vpc03036
]
102530484 (TDRD12)
Enzymes [BR:
vpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
102530484 (TDRD12)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
102530484 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Motif
Other DBs
NCBI-GeneID:
102530484
NCBI-ProteinID:
XP_031527964
LinkDB
All DBs
Position
Unknown
AA seq
1334 aa
AA seq
DB search
MLGASSSGGTRGAGKMLQVLVLKIEDPGCFWVVIKGCSPFLDHEVDYQKLSRAMNDFYSS
MCQDIEIKPLTLEEGQVCVVYCQELKCWCRAVIKSIVSSADHYLAGCFLVDFARYIPVKS
KNIRVAVAAFMQLPYRAKKFRLYCTKPATLHIDVCEDSSEIVPAKKWDSAAVQYFQNLLK
AATQVEAKLCAVKEDTFEVYLYVTIKNEKVCVNDDLVAKNFAYYISPMENKNLDALEKPR
LNMKTASFSNKLNPALTLWPMFLQGKDSQGMESEWILIIATLAFSGCHVRVLDSGRLPGS
IWAPVPASWKLCLHSKTIKCNADSLSSPKKTPEKNQQCISLKDVNKYVKSSVYWPSKRGI
TIYADPDIPAASASCQKPPAKPLRLAEKREHNEKNGCVKLLQFLNPDPLRADGISDLQQL
QKLKSGSRQPLVVLRNKIEPCLSIDTAPLSADLRKALQRNKFPGPSHTESYSWPPIARGC
DVVVVSHCGNDPLLYLPPLLTILQTGACYKSLPSRNGPLAIIVCPGWKKAQFIFALLGDY
GTSSRPLHPMLLTVGLHKDEAKNLKLPRGCDVIITTPHSLLRLLQYQSLLFLRLCHLVLD
EVEVLFSEANEQMFAILDNFKKNIDVEERESAPHQIVAVGVHWDRHTEQLIREFMNDPYV
VITAMEEAALYGNVQQVVHLCLECEKTSTLLQTLDFIPSQAQKTLIFTCSVAETEVVCKV
VESSSIFCLKMHKEMAFNFKSVLEQWKKKLSYGSHIVLALTDDCVPLLAITDATCVIHFS
FPSSPRIFGGRLYCMSDHFQSLTEQGSPAEQGDKKTKSVLLLTERNACHTVGVLHYLERA
DAKIPSELYEFTAGILEAKEDKKARRPLCPYLKAFGFCKNERICPDRHHVNPEADMPRKL
SNQALPVFGYIKIIPFYILNATNYFGRIVGKHVDLYATLNAEMKEYFEDSTDKTAVEKVE
KCGLYGLAEKTVFHRVQVLEVGQKEDTWAPDNVLVKFIDEGRTGLVTGDQLLQLPERFHT
LPPQAVEFIVCRVKPADNEIEWNPKVTRYIHHKITGKLHDAKVMLALGNTVWVDPMVHIT
KLPNLKTSVVDYNVRAEILSTGMGIDNSEHIEQLKKLYKGANMPAFEDGPSQTLMPSSTE
DSACLQSTRQEDMGSERGADSETNSENEKHETSSENTGDASINKTTAPLKSFHPQIKWFQ
KEDVVILKIKIRNVKDYKCKYFRDRVVFSAWVGEKFYLADMELQANIIKDDCKCVIEHDE
PIITLAKERRESWRGLLRQRNPNVAFDFDHWEDCEEDKDSHFSNVVNSKNLPRKAAQLID
TSDESSEEDESESE
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgctcggggcgagttcatccggtggcacgagaggcgcggggaagatgctccaggtcctg
gtgctgaagattgaagatccaggttgcttctgggttgttataaaagggtgcagtcccttt
ttagatcatgaagttgactatcaaaaactcagtcgtgccatgaatgacttctatagcagt
atgtgtcaagatatagaaataaaaccattaacgttggaagaaggacaggtttgtgtggtt
tattgtcaggaactcaagtgctggtgccgggctgttattaagtcgatcgtgtcttcagct
gaccattacctggcagggtgtttccttgtggattttgccagatacattccagtgaaatcc
aaaaacatccgagttgcagtagcagctttcatgcagcttccctacagagcaaaaaaattc
agactgtactgcacaaaacctgccacgttgcacattgacgtctgtgaagacagctctgag
attgtacccgccaagaaatgggacagtgcagctgtccagtactttcagaaccttctgaaa
gcagctacccaggtggaagccaaattgtgtgctgtgaaagaagatacttttgaggtttac
ctctatgtaactataaaaaatgaaaaggtttgtgttaatgatgatctggttgcaaagaac
ttcgcatattacatatcacctatggaaaataaaaaccttgatgctctagagaaaccaaga
ttgaatatgaagacagcatccttttccaataaactcaatccagcacttactctttggcca
atgtttttgcaaggaaaagattctcaagggatggaaagtgagtggattctcatcattgcc
accttggccttttcgggctgtcatgtccgagtccttgattcgggaagactgccaggctcc
atctgggcccccgtccctgcatcctggaagctctgtctacacagtaaaactataaaatgt
aatgcggattcactgagttcacctaaaaaaacacctgaaaagaaccagcagtgcatctct
ttaaaagatgtaaataagtatgtgaaatcttcagtgtactggccgtcaaaaagaggcata
accatatatgctgatccagatataccagcagcaagcgcttcctgccagaagccacctgcg
aagccgctgaggctggctgagaagagggagcacaatgagaagaatggctgtgtgaaatta
ttgcagtttctaaatcctgatcctttgagagctgatggaatctctgatcttcagcagttg
cagaagctgaagtcgggctcccggcagcccttggtggtgctgcggaacaagatcgagccc
tgcttatccattgacacggcgccactctccgcagacctgagaaaggctcttcaaaggaat
aagtttccgggacccagccacactgagtcttactcttggcctcccatagcacgtggctgt
gatgtggtggtcgtttctcactgtggaaatgatcctctgttgtaccttccaccattgctt
acaattttgcaaactggggcctgctacaagtcattaccaagcagaaacggacctctggca
atcatcgtgtgccctggctggaaaaaggcccagtttatttttgcattactgggagactac
ggcacgtcctccaggccgctgcatcctatgttgctgacagtcggactccacaaagacgaa
gccaaaaatctgaagcttccaagggggtgcgatgtgattattactacaccccacagcctc
ctgaggcttctccagtatcaaagcttgctattccttagactctgtcacctcgttttggat
gaggtggaagtactgttctctgaagccaacgagcaaatgtttgctatattagataacttc
aaaaaaaatattgacgttgaagaaagggagtctgctccacatcagattgttgcagttgga
gttcactgggatcgacatacagagcagttaatcagagagttcatgaatgacccctacgtc
gtgatcacggccatggaggaggctgccctctacggcaatgtgcagcaggtagtacacctt
tgcctggaatgtgaaaaaacctctactttgctccaaactcttgatttcattccaagtcag
gcacaaaagaccttgatcttcacctgttctgtagctgaaacagaagtagtgtgtaaggta
gtagagagcagttccatattttgcttgaagatgcataaagaaatggcttttaattttaaa
agtgttttagaacagtggaagaagaagttaagttatggctctcacattgtattagcctta
acagatgactgtgtaccacttctggccatcactgatgccacctgtgtgatccacttcagc
tttccttcctcgcccagaatttttggtggacgcctgtattgcatgtccgatcattttcag
agtttaacggaacagggttctcctgcagaacagggagataaaaaaaccaaatctgtcttg
ctgctgacggagagaaacgcatgccacacagttggtgtcctgcactacttggagcgagca
gatgccaagatcccttcagagctgtatgagtttactgcggggattctggaagccaaagaa
gataaaaaagccagaaggcctctttgtccgtatcttaaggcttttggtttttgcaagaac
gaaaggatctgtcctgatcgacaccatgttaatcccgaagcagacatgccaaggaaatta
tccaaccaagctcttccagtgtttggatacataaaaataatacccttttatattttgaat
gcaacgaattactttggtcgtatagttggtaagcatgtggatctttatgcaactcttaat
gctgaaatgaaggagtattttgaggattccactgataaaacagctgttgaaaaggtggag
aaatgtggattatatggattagcagaaaaaacagtttttcacagggttcaggtgctggag
gtaggccaaaaagaagacacatgggccccggataacgttctggtgaagtttatagacgaa
ggcaggactggactggtcacaggagaccagctgctgcagctcccggaacgcttccacact
ctgcccccccaggccgtggagtttattgtttgtagagtgaaacccgctgacaatgaaatt
gaatggaatccaaaggttactaggtacattcatcataaaattactggaaaactgcacgat
gcaaaagtgatgttggctttaggaaatacagtttgggttgatccaatggtgcacattaca
aaacttccaaacttgaaaacttctgtcgttgattacaacgtccgggctgaaattttgtca
acgggaatgggcattgataactcagagcacatagaacaactgaaaaaattatacaaagga
gctaacatgccagctttcgaagacggcccaagccagaccctgatgccttcttcaacagaa
gatagtgcttgtctgcagagcacgcggcaggaggacatgggctcagagagaggtgctgac
tccgagacaaactcagaaaatgaaaagcatgaaacttcatctgaaaacactggagatgct
tccattaacaaaactacagcgcctctgaaaagcttccacccacagataaagtggttccaa
aaggaggatgtcgtcatactgaagataaaaataaggaatgtaaaagattacaaatgtaaa
tattttagagatagagtcgttttcagtgcctgggtgggagagaaattttacctcgctgac
atggagctgcaggccaacatcataaaagatgactgcaaatgcgtcatcgagcatgatgaa
cccatcatcactcttgccaaagagaggagggaatcctggcgtggcctgctcagacagcgg
aaccccaatgtggcttttgactttgaccactgggaagactgtgaagaggataaggatagc
cacttctccaacgttgtaaattctaaaaacctgccccgcaaagcggcacagttgattgac
accagtgacgagtcttcggaggaagacgagagcgagagtgaatga
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