Vicugna pacos (alpaca): 102530595
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Entry
102530595 CDS
T08098
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102530595 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpc03019
]
102530595 (CNOT10)
Messenger RNA biogenesis [BR:
vpc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
102530595 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
ARM_TT21_N
TPR_12
TPR_19
ARM_TT21
TPR_8
TPR_MalT
TPR_7
DUF6058
TPR_17
Motif
Other DBs
NCBI-GeneID:
102530595
NCBI-ProteinID:
XP_006200673
UniProt:
A0A6I9I0V3
LinkDB
All DBs
Position
17
AA seq
743 aa
AA seq
DB search
MAADKPADQGAEKHEGTGQSSGITDQEKELSTSAFQAFTAGNYDVCLQHLACLQDINKDD
YKIILNTAVAEFFKSNQTTTDSLRQTLNQLKNQVHSAVEEMDGLDDVENSMLYYNQAVIL
YHLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYILTYQAEKALHLLAVLEKMIS
QGNNNKNGKNETGNNTNKEGSNHKAESGALIEAAKSKIHQYKVRAYIQMKSLKACKREIK
SVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGFMKTGECLRCMFWNNLG
CIHFAMSKHNLGIFYFKKALQENDNVCAQLSAGSPDPGKKFSGRPMCTLLTNKRYELLYN
CGIQLLHIGRPLAAFECLIEAVQVYHANPRLWLRLAECCIAANKGTSEQETKGLPSKKGI
VQSIVGQGYHRKIVLASQSIQNTVYNDGQSSAIPVASMEFAAICLRNALLLLPEEQQDPK
QENGSKNSSQLGGNTESSESSETCSSKSHDGDKFIPAPPSSPLRKQELENLKCSILACSA
YVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVT
DVSLGISSNEQDQGSDKGENEAMESSGKRAPQCYPSSVSSARTVMLFNLGSAYCLRSEYD
KARKCLHQAASMIHPKEVPPEAILLAVYLELQNGNTQLALQIIKRNQLLPAVKTLSEMRK
KPVFQPVHPIQPIQMPTFTVQRK
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacaagcctgcagatcagggagcagagaaacatgaagggacaggtcagtcc
tctgggatcactgatcaggagaaggagttgtccaccagtgctttccaagccttcacagct
ggaaattatgatgtctgtctgcaacaccttgcctgcctacaagatataaacaaagatgat
tataaaataattttgaatacagcagtggctgagttttttaaaagtaaccaaacaacaaca
gatagtttgagacaaacacttaaccagctgaagaatcaggtccactcggctgttgaagaa
atggacggattagatgatgttgagaacagcatgctgtattacaaccaggcagtcattctc
tatcatctgcggcagtacacagaagccatatcagtcggtgaaaaactttatcagttcata
gaacctttcgaagaaaaatttgcccaagcagtgtgttttttgctggtagacctgtatata
ttaacctaccaagctgagaaagctctacatcttcttgctgttctagaaaaaatgatttcc
cagggcaacaataacaaaaacggaaagaatgagactggtaataacaccaacaaagaagga
tctaatcataaagccgaaagtggagccctaatagaagctgcaaagtcaaagatacatcag
tataaagtaagagcttatatccaaatgaagtccctgaaggcttgcaaaagggaaatcaag
tcggtcatgaacacagctggaaattctgcaccttctctgtttctcaaaagtaattttgag
tacttaagaggcaattatcgaaaagctgtgaagctattgaatagttcaaacattgctgag
catccgggattcatgaaaacaggtgaatgcttgagatgcatgttctggaataatcttggt
tgtatccattttgccatgagcaaacacaatttgggaattttctactttaaaaaggctctg
caggagaatgacaatgtctgtgcgcagctcagtgcaggcagccctgatccaggcaaaaaa
ttctcaggaagacccatgtgtacattactaaccaacaagaggtatgagctgctgtataac
tgtgggattcagctcctccacattggacggcctctggctgcgttcgagtgtctcattgaa
gccgttcaggtgtatcacgcaaacccccgcctctggctgcggttggctgagtgctgcatt
gccgccaataaggggacttctgaacaagaaactaaaggtcttccaagtaaaaagggaatt
gtacaatctattgttggtcaaggctatcatcggaaaatcgtcctggcatcacagtccata
cagaatactgtgtataatgatggacagtcttcagccattccggtagccagtatggagttt
gcagccatctgtctcagaaacgccttgttgctgttacctgaagaacagcaagatccaaag
caggaaaatgggtctaaaaatagcagtcagttaggaggtaacacagagagcagcgagagc
agcgaaacttgcagcagtaaaagccacgatggagataaattcattccagctccaccttct
tctccattgagaaaacaggaattagaaaacttaaaatgctccattctcgcctgcagtgct
tacgtggctctggcgttgggtgataacctcatggctctgaatcacgcagataaactcctt
cagcagcccaagctgtcagggtctcttaagtttttgggccatttatatgctgcagaagcc
ctcatctctctggacagaatatctgatgctattactcacttgaacccggagaatgtcact
gatgtctccttggggatctcttcaaatgagcaggaccaaggatcagacaagggtgaaaac
gaagcaatggaatcctccgggaagcgggcccctcagtgctaccccagctccgtcagctca
gccaggaccgtgatgctgttcaacctggggagcgcctactgcctgcggagcgagtatgac
aaagcccggaagtgtctccaccaggcggcttcaatgatccatcccaaagaagtgccccct
gaagccatcttactggcagtctacctcgaactacagaatggtaatacccagctggccttg
cagatcatcaaaaggaatcagctgctccctgcagtgaaaacactctctgaaatgagaaag
aagccagtgtttcagcctgtccatccgatccagcccatccaaatgccaactttcactgtg
cagagaaagtga
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