KEGG   Vicugna pacos (alpaca): 102530716
Entry
102530716         CDS       T08098                                 
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
  KO
K13175  THO complex subunit 6
Organism
vpc  Vicugna pacos (alpaca)
Pathway
vpc03013  Nucleocytoplasmic transport
vpc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102530716 (THOC6)
  09122 Translation
   03013 Nucleocytoplasmic transport
    102530716 (THOC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vpc03019]
    102530716 (THOC6)
   03041 Spliceosome [BR:vpc03041]
    102530716 (THOC6)
Messenger RNA biogenesis [BR:vpc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     102530716 (THOC6)
Spliceosome [BR:vpc03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    102530716 (THOC6)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_NOL10_N WD40_Prp19 Beta-prop_WDR36-Utp21_2nd WDR55 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_EML_2 WD40_Gbeta NBCH_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_IP5PC_F EIF3I WDR54 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd TRM82_WD ASA1 Beta-prop_WDR75_1st Beta-prop_TEP1_C DSE1_N CFAP251_N Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_VPS8
Other DBs
NCBI-GeneID: 102530716
NCBI-ProteinID: XP_006204361
UniProt: A0A6I9I907
LinkDB
Position
18
AA seq 341 aa
MERAVLHAVPLGQMEVFQALQRLHMTIFSQSVSPCGKFLAAGNNYGQIAIFSLSAALSSE
AKEESKKPMVTFQAHDGPVYSMVSTDRHLLSAGDGEVKAWLWAEILKKGCKELWRRQPPY
RTSLEVPEINALLLVPKENSLILAGGDCQLHSMDLETGTFMRALRGHTDYIHCLALRERS
PEVLSGGEDGAVRLWDLRTAKEVQTIEVYKHEECSRPHNGRWIGCLATDSDWMVCGGGPA
LTLWHLRSSTPTTVFPMRAPQKHVTFYQDLILSAGQGRCVNQWQLSGELKAQVPGSSPGL
LSLSLNQQPAAPECKVLTAAGNSCRVDVFTNLGYRAFSLSF
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggagcgagctgtgctgcacgccgtgcctctgggtcagatggaagtatttcaggctctg
cagcggctgcacatgaccattttctcccagagtgtctcaccttgtgggaagttcctggca
gctggcaacaattacgggcagatagccatctttagcttgtctgctgctttgagctctgag
gccaaagaggaaagtaagaagcccatggtgaccttccaagcccatgatgggcctgtctac
agcatggtctccactgatcgacatctgctcagtgctggggatggggaagtgaaggcctgg
ctttgggcggagatcctcaagaagggctgtaaggagctgtggcgtcgtcagcccccatac
aggaccagcctggaagtacctgagatcaatgctttgcttctcgtccccaaggagaattcc
ctcatcctggctgggggagactgtcagctgcattctatggaccttgagacggggaccttc
atgcgggctctccggggccacactgactacatccactgcctggcactgcgggagcggagc
cccgaggtgctgtcaggtggtgaggatggggctgtgcggctttgggacctccgcacagcc
aaggaggtccagacaattgaggtctacaagcacgaggagtgctcgaggccccacaatggg
cgctggatcggatgtttggcaactgactcagactggatggtctgtggaggtggcccggca
ctcaccctctggcacctccgatcctccacacccaccaccgtcttcccaatgcgggcacca
cagaagcacgtcaccttctaccaggacctgattctgtcagctggccaaggtcgctgtgtc
aaccagtggcagcttagtggggagctcaaggcccaggtgcctggctcctccccagggctg
ctaagcctcagcctaaaccagcaaccagcagcccctgagtgcaaggtcctgacagccgcc
ggcaacagctgcagggtggatgtcttcaccaatctgggctaccgagctttctccctgtcc
ttctga

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