Vicugna pacos (alpaca): 102530716
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Entry
102530716 CDS
T08098
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
KO
K13175
THO complex subunit 6
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102530716 (THOC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpc03019
]
102530716 (THOC6)
03041 Spliceosome [BR:
vpc03041
]
102530716 (THOC6)
Messenger RNA biogenesis [BR:
vpc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
102530716 (THOC6)
Spliceosome [BR:
vpc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
102530716 (THOC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WDR55
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EML_2
NBCH_WD40
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_IP5PC_F
EIF3I
WDR54
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
102530716
NCBI-ProteinID:
XP_006204361
UniProt:
A0A6I9I907
LinkDB
All DBs
Position
18
AA seq
341 aa
AA seq
DB search
MERAVLHAVPLGQMEVFQALQRLHMTIFSQSVSPCGKFLAAGNNYGQIAIFSLSAALSSE
AKEESKKPMVTFQAHDGPVYSMVSTDRHLLSAGDGEVKAWLWAEILKKGCKELWRRQPPY
RTSLEVPEINALLLVPKENSLILAGGDCQLHSMDLETGTFMRALRGHTDYIHCLALRERS
PEVLSGGEDGAVRLWDLRTAKEVQTIEVYKHEECSRPHNGRWIGCLATDSDWMVCGGGPA
LTLWHLRSSTPTTVFPMRAPQKHVTFYQDLILSAGQGRCVNQWQLSGELKAQVPGSSPGL
LSLSLNQQPAAPECKVLTAAGNSCRVDVFTNLGYRAFSLSF
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggagcgagctgtgctgcacgccgtgcctctgggtcagatggaagtatttcaggctctg
cagcggctgcacatgaccattttctcccagagtgtctcaccttgtgggaagttcctggca
gctggcaacaattacgggcagatagccatctttagcttgtctgctgctttgagctctgag
gccaaagaggaaagtaagaagcccatggtgaccttccaagcccatgatgggcctgtctac
agcatggtctccactgatcgacatctgctcagtgctggggatggggaagtgaaggcctgg
ctttgggcggagatcctcaagaagggctgtaaggagctgtggcgtcgtcagcccccatac
aggaccagcctggaagtacctgagatcaatgctttgcttctcgtccccaaggagaattcc
ctcatcctggctgggggagactgtcagctgcattctatggaccttgagacggggaccttc
atgcgggctctccggggccacactgactacatccactgcctggcactgcgggagcggagc
cccgaggtgctgtcaggtggtgaggatggggctgtgcggctttgggacctccgcacagcc
aaggaggtccagacaattgaggtctacaagcacgaggagtgctcgaggccccacaatggg
cgctggatcggatgtttggcaactgactcagactggatggtctgtggaggtggcccggca
ctcaccctctggcacctccgatcctccacacccaccaccgtcttcccaatgcgggcacca
cagaagcacgtcaccttctaccaggacctgattctgtcagctggccaaggtcgctgtgtc
aaccagtggcagcttagtggggagctcaaggcccaggtgcctggctcctccccagggctg
ctaagcctcagcctaaaccagcaaccagcagcccctgagtgcaaggtcctgacagccgcc
ggcaacagctgcagggtggatgtcttcaccaatctgggctaccgagctttctccctgtcc
ttctga
DBGET
integrated database retrieval system
