Vicugna pacos (alpaca): 102530833
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Entry
102530833 CDS
T08098
Symbol
NUP54
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin p54
KO
K14308
nuclear pore complex protein Nup54
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03013
Nucleocytoplasmic transport
vpc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102530833 (NUP54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102530833 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpc03019
]
102530833 (NUP54)
Messenger RNA biogenesis [BR:
vpc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102530833 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
102530833
NCBI-ProteinID:
XP_006198300
UniProt:
A0A6I9HWW5
LinkDB
All DBs
Position
2
AA seq
509 aa
AA seq
DB search
MAFNFGAPSATSGTAAATAAPTGGFGGFGTTSTTAGSAFSFSTPANTGATGLFGGTQNKG
FGFGTGFGTTAGTSTGLGTGLGTGLGFGGFNTQQQQQQQTTLGGLFSQPTQAPTQSNQLI
NTASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGY
SCMPNNKDEDGLVVLVFNKKETDIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQT
EVVIYVVERSPNGTSRRVPATTLYAYFEQTNIKTQLQQLGVTLSMTRTELSPAQIKQLLQ
NPPAGVDPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDI
SELQKNQTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQ
CELNAPTQFKGRLNELMSQIRMQNHFGAVKSEERYYIDADLLREIKQHLKQQQEGLSHLI
SIIKDDLEDIKLVEHGLNETIHIRGGVFS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaactttggggctccctcggccacctcgggtactgctgcagccaccgcggcc
cccacgggtgggtttggaggatttgggacaacatctacaacagcaggttctgcattcagc
ttttctactccagctaacacaggtgctactggactctttggtggtactcagaacaaaggt
tttggatttggtactggttttggcacaacagctggaactagtactggtttaggtactggt
ttgggaactggacttggatttggaggatttaatacacagcagcagcaacagcaacaaact
acattaggtggtctcttcagtcagcctacacaagctcctacccagtccaaccaactgata
aatactgcaagtgctctttctgctcctacgctactgggagatgagagagatgctattttg
gcaaaatggaatcaactacaggccttttggggaacaggaaaaggatatttcaacaataac
attccaccagtggagttcacacaagaaaatcccttttgccgatttaaggcagtaggttat
agttgtatgcccaataataaagatgaagatgggctagtggttttagttttcaacaaaaaa
gaaacagatattcgaagccagcaacagcagttggtagaatcactgcataaagttttggga
ggaaaccagacccttactgtaaatgtagagggtattaaaacattgccagatgatcagaca
gaagttgtcatttatgttgttgaacgttctccaaatggtacttcaagaagagttccagct
acaacgctgtatgcctattttgaacaaaccaatataaaaacacaattgcagcaacttggt
gtaaccctttctatgactagaactgaactttctcctgcacagattaaacagcttttacag
aatcctcctgctggtgttgatcctattatctgggaacaagccaaagtggataaccctgat
tctgaaaagttaattcctgtaccaatggtgggtttcaaagaacttcttcgaagactgaag
gttcaagatcagatgactaagcagcatcagaccagactggatatcatatctgaagatatt
agtgaattacagaagaatcaaactacgactatggccaaaattgcacagtacaagaggaag
ctcatggacctttcccatagaaccttacaggtgctaatcaaacaggaaattcagaggaag
agtgggtacgccatccaagctgatgaagagcagctgcgagttcagctagatacaattcag
tgtgaactaaatgcgcctactcagtttaagggccgactaaatgaactgatgtcccaaatc
aggatgcagaatcattttggagcagtcaaatctgaagaaagatattacatagatgcagat
ctgttacgagaaatcaaacagcatttgaaacaacaacaggaaggccttagccacttgatt
agcatcataaaagatgacctagaagatatcaagttggtagaacatggattgaatgaaacc
atccacatcagaggtggtgtctttagttga
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