Vicugna pacos (alpaca): 102530889
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Entry
102530889 CDS
T08098
Symbol
FUBP1
Name
(RefSeq) far upstream element-binding protein 1 isoform X11
KO
K13210
far upstream element-binding protein
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpc03019
]
102530889 (FUBP1)
03041 Spliceosome [BR:
vpc03041
]
102530889 (FUBP1)
Messenger RNA biogenesis [BR:
vpc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
102530889 (FUBP1)
Spliceosome [BR:
vpc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
102530889 (FUBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
Secretin_N
Motif
Other DBs
NCBI-GeneID:
102530889
NCBI-ProteinID:
XP_006206019
UniProt:
A0A6I9IB71
LinkDB
All DBs
Position
13
AA seq
665 aa
AA seq
DB search
MADYSTVPPPSSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGY
GGQKRPLEDGDGSWTSPSSTTHWEGMPSPFKDQPDAKKVAPQNDSFGTQLPPMHQQQSRS
VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQS
AKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKM
VMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGID
VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEII
TDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETI
KSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVP
HGPHGVPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQ
QAPPDPAKTGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNGQGDQQNPAPAGQ
VDYTKAWEEYYKKMGQAVPAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPP
APQGQ
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcagactattcaacagtgcctccaccgtcctctggctcagctggtggtggaggcggt
ggcggcggtggtggaggagttaacgatgctttcaaagatgcgctgcagagagcccggcag
attgctgcaaaaattggaggtgatgctggtacatcactgaattcaaatgactatggttat
gggggacaaaaaaggcctttggaagatggagatggctcttggacaagtccgagcagtaca
acacactgggagggaatgccctctccttttaaagatcagccagacgctaagaaagttgct
cctcaaaatgactctttcggaacacagttaccaccgatgcatcagcagcaaagcaggtct
gtaatgacagaagaatacaaagttccagatggaatggttggatttataattggcagagga
ggtgaacagatctcacgcatacaacaggaatctggatgcaaaatacagatagctcctgac
agtggtggccttccagaaaggtcttgtatgttaactggaacacctgaatctgtccagtca
gcaaaacggttactggaccagattgttgaaaaaggaagaccagcccctggcttccatcat
ggtgatggaccaggaaatgcagttcaagaaatcatgattccagctagcaaggcaggatta
gttattggaaaggggggagagactattaaacaacttcaggagcgggctggagttaaaatg
gttatgatccaagatggacctcagaacactggtgctgacaaacctcttaggattacagga
gacccatacaaagttcaacaagccaaggaaatggtgttagagttaattcgtgatcaaggt
ggtttcagagaagttcgaaatgagtatgggtcaagaataggaggaaatgaagggatagat
gtccccattccaagatttgctgttggcattgtaataggaagaaatggagagatgattaaa
aaaatacaaaatgatgctggtgttcgaattcagtttaagccagatgacggaacaacacct
gatagaatagcacaaataacaggacctccagaccgatgtcagcatgccgcagaaattatt
acagaccttcttcgaagtgttcaggctggcaatcctggtggacctggacctggtggtcga
ggaagaggtagaggtcaaggcaactggaacatgggaccacctggtggactacaggaattt
aatttcattgtcccaactgggaaaactggattaataataggaaaaggaggtgaaaccata
aaaagcataagccaacagtcgggtgcaagaatagaacttcagagaaatcctccacctaat
gcagatcctaatatgaagttatttacaatccgtggcactcctcagcaaatagactatgct
cggcaactcatagaagaaaagattggtggcccagtaaatcctttagggccacctgtaccc
catgggccccatggtgtcccaggcccacatgggcctcctgggcctcctgggcctggaact
ccaatgggaccatataaccctgcaccttataatccgggaccacctggccctgctcctcat
ggtcctccagccccttatgctccccaggggtggggaaatgcatatccacattggcagcaa
caggcccctcctgatccagctaagacaggaacggatccaaattcagcagcctgggctgct
tactatgctcactattaccaacaacaagcacagccaccacctgcggctcctgccggtgca
ccgacaacaacccaaaccaatggacaaggagatcagcagaatccagctccagccggacag
gttgattatactaaggcttgggaagagtactacaagaaaatgggtcaggcagttcctgct
cctactggtgctccaccaggtggtcagcccgattatagtgcagcctgggctgagtactat
agacagcaagccgcctactatgcccagacaagtccccagggaatgccgcagcatcctcca
gctcctcagggccaataa
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