Vicugna pacos (alpaca): 102530910
Help
Entry
102530910 CDS
T08098
Symbol
SHANK2
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 and multiple ankyrin repeat domains protein 2
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
102530910 (SHANK2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
SAM_2
Ank_3
Ank_4
Ank_5
SH3_2
PDZ_6
SH3_9
PDZ
FERM_f0
SH3_1
PI3K_rbd
SAM_4
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
102530910
NCBI-ProteinID:
XP_031546900
LinkDB
All DBs
Position
25
AA seq
1851 aa
AA seq
DB search
MPRSPTSSEDEMAQSFSDSSEDSDSDSSKEETIYDTIRATAEKPGGARTEESQGNTLVVR
IVIEDLQQTKCIRFNPDATVWVAKQRILCSLNQSLKDVLNYGLFQPASGGRDGKFLDEER
LLREYPQPTGKGVPSLEFRYKKRVYKQSNLDEKQMAKLHTKTNLKKCMDHVQHRSVEKVV
KMLERGLDPNFHDLESGETPLTLAAQLDDPGEVIKALRNGGAHLDFRAKDGMTALHKAAR
TRNLLALKTLLELGASPDYKDSYGLTPLYHTAIVGGDPCCCELLLHEHAAVSCKDENGWH
EIHQACRYGHVQHLEHLLFYGADMGAQNASGNTALHICALYNQDSCARVLLFRGGNKELK
NYNSQTPFQVAIIAGNFELAEYIKNHKETDIVPFREAPAYSNRRRRPPSTLAAPRVLLRS
NSDNNLTASAPDWAACSAAAHRSLSPQLLQPGQVPGRPDGALKTIASYTPGPXSRSPSLN
RLGGASEDGKRPQQPWHVGPAFPPGANKDTLSAFECPGPRRKLYSAVPGRLFVVVKPYQP
QVDGEIPLHRGDRVKVLSIGEGGFWEGSARGHIGWFPAECVEEVQCKPKDSQAETRADRS
KKLFRHYTVGSYDSFDASSDCIIEEKTVVRAEERTMRAFGFRLLRRGGKADTPIEEFTPT
PAFPALQYLESVDEGGVAWQAGLRTGDFLIEVNNENVVKVGHRQVVNMIRQGGNHLVLKV
VTVTRNLDPDDTARKKAPPPPKRAPTTALTLRSKSMTSELEELVDKASVRKKKDKPEEIV
PAPKPSRTAESVAVESRVATIKQRPTSRCFPPVSDMNSVYERQGIAVMTPTVPGSPKGPF
LGLPRGTMRRQKSIDSRIFLSGITEEERQFLAPPMLKFTRSLSMPDTSEDIPPPPQSVPP
SPPPPSPTTYNCPKSPTPRVYGTIKPAFTQNSATKVSPAARSDTVAAVVREKGLHYRREL
DRYSLDSEDLYSRNAAAQANFRGKRGQMPENPYSEVGKIASKAVYVPAKPARRKGVLVKQ
SNVEDSPEKTCSIPIPTIIVKEPSTSSSGKSSQGSSMEIDPQASEPPGQLRPDDSLTVSS
PFAAAIAGAVRDREKRLEARRNSPAFLSTDLGDEDVGLGPPAPRARPSKFPEEGGFGEED
GTEQLPSPTPGAAPREPENHFAGSGEVGAQGEASRPLNSTSKAKGPESSPVVPPKSSPAA
GPENYVHPLTGRLLDPSSPLALALSARDRAMKESQQGPKGEAPKADLNKPLYIDTKMRPS
TDTGFPAVTRQNTRGPLRRQETENKYESELGRERRDDKKSLLISVMDAAQHKAAGLLMVH
TVDAAQPDDFLEEEDEKADVETKPDNSPLEVPEGVPETEGALPIPAGPEPAAAAAGRTIV
AAGSVEEAVILPFRIPPPPLASVDLDEDFIFTEPLPPPLEFANSFDIPDDRVASVPALTD
AVKQKKNDASQPPSLNSSQPTNSADSKKPASLSNCLPASFLPPPESFDTVTDSGIEEVDS
RSSSDHHLETTSTISTVSSISTLSSEGGENVDTCTVYADGQAFLVDKPPVPPKPKMKPII
HKGNALYHDALLEEDVDSFVIPPPAPPPPPGGAQPGATKLIQPRTSRLWGDVSEVKSPIL
SGPKANVISELNSILQQMNREKSAKPGEGLDSPTGAKPASLTPRGPEVTGTVSGTRSTTV
TFTVRPGTSQPITLQSRPPDYESRTSGPRRAPSPVVSPTELNKEILPAPLSAAAASPSLS
EVFGLPSQPAPGDLFGLNPVGRSRSPSPSILQQPVSNKPFTTKPVHLWTKPDVADWLESL
NLGEHKEAFMDNEIDGSHLPNLQKEDLIDLGVTRVGHRMNIERALKQLLDR
NT seq
5556 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcagcccgacatccagcgaggacgagatggcccagagcttctccgactcctcg
gaggactcggactcggacagctccaaggaggagaccatctacgacaccatccgggccaca
gcggagaagccgggcggcgccaggacggaggagagccagggcaacaccctggtggtccgc
atcgtcatcgaggacctgcagcagacgaaatgcattcgattcaaccccgatgccacggtg
tgggtcgcaaagcagcggattctgtgttccctgaaccagagcctgaaggacgtcctgaac
tacgggctgttccagccggcgagcggggggcgggacggcaagttcctggacgaggagcgg
ctcctgcgggagtacccgcagcccacgggcaagggcgtgccctccctggagtttcgatac
aagaagcgggtgtacaagcagtccaacctggacgagaagcagatggccaagctgcacacg
aagaccaatctgaaaaagtgcatggatcacgttcagcaccggtcggtggagaaggtcgtc
aagatgctggaacgcggcctggacccgaacttccacgacctggagagtggagagactccg
ctgaccttagccgcacagctggacgaccccggggaggtgatcaaagccctgagaaacggc
ggggcccacctggacttccgcgccaaggatgggatgacggccctgcacaaagccgcccgc
accagaaacctgctggccctgaagaccctcttggagcttggcgcgtccccggattacaag
gacagctacggcctcacgccgctgtatcacaccgcgatcgtcgggggcgacccctgctgc
tgcgagctgctcctccacgagcacgcggccgtgagctgcaaggacgagaacggctggcac
gagatccaccaggcctgcaggtatgggcacgtgcagcacctggagcacctgcttttctat
ggagctgacatgggggcgcagaacgcctccgggaacaccgcgctgcacatctgcgccctc
tacaaccaggacagctgtgcccgagtgctgctgtttcgaggaggaaataaggaattgaag
aactacaacagccagaccccatttcaggtggcgatcatagccggcaactttgagctggcc
gaatacatcaagaaccacaaggagacggacatcgtgcccttccgagaggccccggcgtac
tccaaccgtaggcggcggccccccagcacgctggccgccccccgggtcctgctgcgctcc
aacagtgacaacaacctcaccgccagcgcacccgactgggccgcctgctccgccgccgcc
caccgcagcctctcgccccagctgctgcagccaggtcaggtgcccggcagacccgacggg
gccctgaagaccatcgcgagctacaccccgggcccgnncagccgctccccgtcactcaac
aggctgggcggtgccagtgaggatggcaagaggccccagcagccctggcatgtcgggccg
gctttcccgccaggtgccaacaaagacacgctctccgcctttgagtgtccagggcccaga
cggaagctgtacagtgcagtgcccgggcggctctttgtcgtcgtcaagccataccaaccc
caggtcgacggcgagataccccttcaccgtggcgacagggtcaaagttctgagcatcggc
gaagggggcttctgggaaggcagcgcccgaggccacatcggatggttcccggccgagtgc
gtggaggaagtccagtgtaagccaaaggacagccaggcagaaacgcgagcagaccgcagc
aagaaacttttccggcactacacggtgggctcctatgacagctttgatgcgtccagcgac
tgcattatcgaggagaagaccgtggtccgtgcagaagaaagaacaatgagggcgtttggg
tttcggttgctccgacggggcggaaaggcggatacgcccattgaagaattcacgccgaca
ccggcgttcccagccctgcagtacctggagtccgtggatgaaggtggggtggcgtggcaa
gccggactgaggactggggacttcttgattgaggttaacaacgagaacgtggtgaaggtc
ggccaccggcaggtggtgaacatgatccgccagggagggaaccaccttgtcctcaaggtg
gtcacggtgaccaggaatctcgacccggatgacaccgccaggaagaaagctcctccacct
ccaaagcgcgctccgaccacggccctcaccctgcgctccaagtccatgacctcggagctg
gaggagctcgtggataaagcctccgtccggaagaagaaggataaacccgaggagatagtc
ccagcccctaagccatcgcgaaccgctgagagtgtggccgtggagtccagggtggccacc
atcaagcagcggcccacgagccggtgcttcccgcctgtctctgacatgaactccgtgtac
gagcgccaggggatcgctgtgatgacgcccactgttcctgggagcccgaaaggcccgttt
ctgggcctccctcgaggtacgatgcgaaggcagaaatcaatagacagcagaatctttcta
tcaggaataacggaggaagagcgacagtttctggcccctccaatgctgaagttcaccaga
agcctgtccatgccggacacctccgaggacatcccgcccccaccgcagtcagtgcccccc
tctccgccaccaccctcccccaccacctacaactgcccaaagtccccaaccccaagagtc
tacgggacaatcaagcctgcgttcacacagaactccgccaccaaggtgtccccggcggcc
cgctccgacacggtggccgccgtggtgcgggagaaggggctgcactaccggagggagctg
gaccgctactccctggactctgaggacctctacagccgcaatgccgccgcccaggccaac
ttccgcggcaagaggggccagatgcccgaaaacccgtactccgaggtggggaagatcgcc
agcaaagcggtctacgtccccgccaagccagccaggcggaagggcgtgctggtgaagcag
tccaacgtggaggacagccccgagaagacttgctccatccccatccccaccatcatcgtc
aaggagccttccaccagcagcagcggcaagagcagccagggcagcagcatggagatcgac
ccccaggcctccgagccgcccggccagctgcggcccgacgacagcctgaccgtcagcagc
cccttcgctgccgccatcgctggggccgtccgcgaccgggagaagcggctggaggccagg
aggaactcgcccgccttcctgtccacagacctgggggacgaggacgtgggtctggggccg
cccgccccccgggcgcggccctccaaattccccgaggagggtgggtttggtgaggaggat
ggcacggagcagctgccgtcacccacgccaggggcagcgcccagggagcccgagaaccac
tttgcgggcagtggcgaggtcggagctcagggtgaggccagcaggccactcaattctaca
tccaaagccaaggggcccgagagcagccctgtggtgccccccaagagcagcccggcggcc
ggccccgagaattacgtccacccgctcacagggaggctgctagaccccagctccccactg
gccctggcgctctctgcgagggaccgagccatgaaggagtctcagcagggtcccaagggg
gaggcccccaaggccgacctcaacaaacctctctacatcgataccaaaatgcggcccagc
acagacacaggcttccctgcggtcaccaggcagaacacgcgggggcccctgaggcggcag
gagacagaaaacaagtatgagagcgagctgggccgggagcggcgggatgacaagaaaagc
ctgctcatcagcgtcatggacgcggcccagcacaaggcggccgggctgctgatggtccac
actgtggatgcagcccagccagacgacttcctggaggaagaggacgagaaagctgacgtg
gagacgaagccagacaactcgccgctcgaggtgccagaaggtgttcccgaaaccgaaggt
gctttaccaatccccgctggccccgagcccgcagccgccgcagccggcaggaccatcgtg
gcggcgggctccgtggaggaggcggtgatcctgccgttccgcatccctcccccacctctg
gcatccgtggatctggatgaggattttatttttacagagccattgcctcctcccctggaa
tttgcaaatagttttgatatccccgatgaccgcgttgcttctgtccctgctctcacagat
gcggtcaagcagaaaaaaaacgatgcctcccagcccccttcgttgaactccagccagcca
accaactctgcagacagcaagaagccggccagtctttcaaactgtctgcccgcctcattc
ctgccaccccccgaaagctttgacaccgtcacggactctgggatcgaggaggtggacagc
cggagcagcagcgaccaccacctcgagacgaccagcaccatctccacggtgtccagcatt
tccaccctgtcctctgaaggcggggagaacgtggatacctgtacagtctatgcagacggg
caagcatttctggttgacaaacccccagtacctcctaagccaaaaatgaagcccataatc
cacaaaggcaacgcactttatcatgacgcgctgctggaggaggacgtggacagcttcgtg
atccccccgccagcacccccgccgccgcccggcggggcccagcccggggccaccaagctt
atccagccaaggacctccaggctgtggggggacgtctcggaggtcaaaagcccgattctc
tcaggcccgaaggcaaacgtgattagtgagttgaactcaatcctgcagcaaatgaaccga
gagaaatcggcaaagccgggggaaggactggactcgccgacgggagccaagccagccagc
ctcactccaagaggcccagaggtcacgggcaccgtctcaggtacccggagcacgacggtc
accttcaccgtccgccccggtacctcccagcccatcaccctgcagagccggcccccggac
tacgagagcaggacctcaggacccagacgtgccccaagcccagtggtctcgcccacagag
ctgaacaaagagatcctgcccgccccactgtccgcggccgcagcctctcccagcctctcc
gaggtctttggccttcccagccagcccgctcccggggacctgtttggcctaaacccggtg
ggacgcagcaggtcgccgtctccctccatcttgcaacagccagtctcaaataagcctttt
acaactaagcctgtgcacctgtggaccaaaccagacgtggccgactggctggaaagtcta
aacttgggtgaacataaagaggccttcatggacaacgagattgacggcagccacctccca
aaccttcagaaagaagacctaatagacctgggcgtgacacgcgtcggccacagaatgaac
atagaaagggctctgaagcagctgctggacagataa
DBGET
integrated database retrieval system
