KEGG   Vicugna pacos (alpaca): 102530924
Entry
102530924         CDS       T08098                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
vpc  Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:vpc01009]
    102530924 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vpc03036]
    102530924 (KDM5B)
Enzymes [BR:vpc01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     102530924 (KDM5B)
Protein phosphatases and associated proteins [BR:vpc01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102530924 (KDM5B)
Chromosome and associated proteins [BR:vpc03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    102530924 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_2 zf-PHD-like PHD-1st_NSD
Other DBs
NCBI-GeneID: 102530924
NCBI-ProteinID: XP_031530638
UniProt: A0A6J3AAG8
LinkDB
Position
Unknown
AA seq 1539 aa
MEAPCPRPAPALGGPGPLGEFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVR
PPPDWQPPFACDVDKLHFTPRIQRLNELEAQTRVKLNFLDQIAKYWELQGSTLKIPHVER
KILDLFQLNKLVAEEGGFAVVCKDRKWTKIATKMGFAPGKAVGSHIRGHYERILNPYNLF
LSGDSLRCLQKPNLTTDTKDKEYKPHDIPQRQSVQPSEMCPPARRAKRMRAEAMNIKIEP
EETTEARTHNLRRRMGCPPPKCENEKDMKSSVKQEPIEKKEYVIESEKEKPKSRAKKTTN
AVDLYVCLLCGSGSDEDRLLLCDGCDDSYHTFCLVPPLHDVPKGDWRCPKCLAQECNKPQ
EAFGFEQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEY
GADIASKEFGSGFPVRDGKVKLSPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLP
WLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLETVMKRLAPELFISQ
PDLLHQLVTIMNPNTLMTHQVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTV
DWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIEDEKAL
RETVRKLGVIDSERMDFELLPDDERQCVKCKTTCFMSAISCSCKPGLLVCLHHVKELCSC
SPYKYKLRYRYTLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFKALIEE
SEMKKFPDNDLLRHLRLVTQDAEKCASVAQQLLNGKRQTRYRSGGGKSHNQLTVNELRQF
VSQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEEMPSAAELQDLLDVSFEFDVELP
QLAEMRVRLEQAHWLEEVQRACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELL
TVSEHWDDKARSLLKARPRHSLSSLAAVVKEIEEIPAYLPSGVALRDSVQRARDWLQEVE
ALQVGGRVPVLDTLVELVTRGRSIPVHLSSLPRLESLVAEVHVWKECAASTFLTEDSKFS
LLEVLCPRCDVGLLGLRKKQRKLKEPLPSGKKRSPRVESLSDLERALTESRETASAMAAL
GEARIREMEALQSLRFVNEGKLLSPVQDVELKVCLCQKAPAAPMIQCELCRDAFHTSCVA
VPSISQGSRIWLCPHCRRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVSWQHR
ARQLLSSGNLKSVQDGAGSGLLCGRWQSTAGQVPETGKVSQPPGATSFSLPGDWDNRTSY
LHSPFSTGRSCIPLHGISPEVNELLMEAQLLQVSLPEIQELYQTLLAKPSPAQRADRSSP
VGPGSEKSDSCRGKRDGVSGLERKLKRRLEREGLSSERWERVTKMRAPKKKKVKLSHPKD
TNNFKLERERSCELVPSGDTHSLPSDTSCSEQEDSEDEDALCPAVSCLQPEGDEVDWVQC
DGSCSRWFHQVCVGVSPETAEKEDYVCARCAATDAPGRR
NT seq 4620 nt   +upstreamnt  +downstreamnt
atggaggccccctgcccgcgccccgcgccggccctcggcggccccggcccgctgggcgag
ttcctgccgccgcccgagtgcccggtctttgagcccagctgggaggagttcgccgacccc
tttgccttcatccacaagatccggcccatagccgagcagaccgggatctgcaaggtgcgg
ccgccgccggattggcagccaccatttgcatgtgatgttgacaaactgcattttacccca
cgtatccagaggctgaatgaattggaggctcaaactcgtgtaaaattaaatttcttggac
cagattgcaaagtactgggaattacagggaagtaccctgaaaattccacacgtggagagg
aagatcttggacttgttccagcttaataagttagttgcagaggaaggtggatttgcagtt
gtttgcaaggatagaaaatggaccaaaattgctaccaagatggggtttgctccgggcaaa
gctgtgggctcacacatcagagggcactatgagcgaattctcaacccctacaacttattc
ttgtctggagacagtctgaggtgtctgcagaagccaaatctgaccacagacaccaaggac
aaggagtacaaaccccatgatattccccagaggcagtctgtgcagccctcggaaatgtgt
cccccagcccggcgagcaaaacgcatgagagcggaggccatgaatattaaaatagaacca
gaagagacaacagaagccagaactcataacctgagacgtcgaatgggatgtccgcctcca
aagtgtgaaaatgagaaagacatgaaaagcagcgtcaagcaagaacccattgagaagaaa
gagtatgttatagaaagtgagaaggaaaaacccaagagtcgagctaagaaaaccaccaat
gctgtggacctgtacgtctgcctcttgtgtggcagtggcagcgatgaggaccggctcctc
ttgtgtgatgggtgcgatgacagttaccacaccttctgcctggtcccgcctctccacgat
gttcccaagggagactggaggtgtcctaaatgtctggctcaggagtgcaataagccacaa
gaggcattcggctttgagcaggcagccagggactataccctccgtacatttggggaaatg
gcagatgcgttcaaatctgattacttcaacatgccagtccatatggttcccacagaactg
gttgagaaagaattttggcgactggtgagcaccattgaggaggatgtcacagtggaatat
ggagctgatatcgcttcaaaggagttcggcagtggcttccccgtccgagatgggaaagtc
aagctttcacctgaggaagaggaatatcttgatagtggctggaatttgaacaacatgcca
gtgatggagcagtctgtccttgctcacattactgctgacatatgcggcatgaaactccct
tggttgtacgtgggaatgtgcttttcttccttctgctggcacattgaagaccactggagc
tattccatcaactacctgcactggggtgagccgaagacctggtatggagtcccagggtac
gccgccgagcagctggagacagtgatgaagaggctggccccggagctcttcatctcccag
cccgacctcctccaccagctcgtcacgatcatgaaccccaataccctgatgactcatcaa
gtgccagtttaccgaactaatcagtgtgctggggagtttgtgattacgtttccaagagcc
taccacagcggtttcaatcaaggttttaattttgctgaggccgttaacttctgcactgtt
gactggctgcccttgggccgacagtgcgtggagcactaccgcctgctgcaccgctactgc
gtgttctcccacgacgagatgatttgcaagatggcttccaaggcggacgtgctggatgtc
gtggtggcttcaactgttcagaaggacatggcaattatgattgaggatgagaaggcttta
agagaaactgtccgaaaattgggagtaattgattcagaaagaatggattttgagctgttg
ccagatgatgagcgtcagtgtgtgaaatgcaaaaccacgtgcttcatgtctgccatctcc
tgttcttgtaaacctggcctgcttgtttgcctgcatcatgtaaaagaattatgttcctgt
tctccttataagtataaattgcggtacagatacacgctggatgatctttaccctatgatg
aatgcattgaagcttcgagcagaatcttacaatgaatgggccttgaatgtgaatgaagct
ttggaggcaaagatcaataagaagaaaagccttgtcagctttaaggctttgattgaagaa
tctgagatgaagaaattcccggacaacgatcttttgcgtcacctccgattagtcacgcaa
gatgcagagaagtgtgcctctgtcgcacagcagctgcttaatggcaaaaggcagacgaga
taccgatctggtggaggcaagtcccacaatcagttgacagtgaatgagctccgacagttc
gtgtcacagctgtacgccctcccgtgtgttctcagtcagacgccactgctgaaggatctc
ctgaatcgtgtagaagatttccagcagcacagccagaaactgctctctgaggagatgccc
agtgctgctgagttgcaggacttgctggacgtcagctttgagtttgatgttgaactccca
cagctggcagagatgcgtgtccggttggagcaggcccattggctagaggaggtgcagcga
gcttgcctcgaccccagctccctcaccttggatgatatgagacgtctcatagacctgggg
gtgggtctggccccatactcggccgtggagaaggctatggcacggcttcaggaactgctt
acggtgtcagagcactgggatgataaggccaggagtctcctgaaggccaggcctcggcat
tcattgagcagccttgctgcagtggttaaggagatcgaggagatcccggcgtacctgccc
agcggcgtggctctgagagactcggtgcagagagccagagactggctgcaggaggtagag
gcgctgcaggttggaggacgggtgcctgtgttagacacgctggtggagcttgtaacccga
ggccgctccatcccggtgcatctgagttccttaccgagactggagtccctcgtggctgag
gtccacgtttggaaagaatgtgctgccagcaccttcctaactgaagactcgaagttttct
ctcctggaggttctgtgtcctcgatgtgacgttggcctcttgggattgaggaaaaagcag
aggaagttaaaggagcccttgccgagtgggaaaaagagaagccccagagtggagagcctg
agcgacctggagagagccctgaccgagagcagagagactgcgtcagcgatggcagcgctc
ggagaagctcgcatacgagaaatggaagccctgcagtctctgagattcgtcaatgaaggg
aagttgctgtcacctgtgcaggacgtggagctgaaggtctgcctgtgtcagaaggcccca
gctgcccccatgatccagtgtgaactctgcagggatgcttttcacaccagctgtgtggcc
gtacccagtatttcacagggctcccgcatctggctttgtccccattgtcggaggtcagag
aaacctccgttagagaaaatcctgcccctgctggcctccctccagcgcatccgagttcgc
cttccagagggagatgcacttcggtacatgattgaaagaaccgtgagctggcagcacaga
gcccgccagctgctctcgtcagggaacctcaaatctgtgcaggacggtgcaggctcagga
ctgctgtgtggcaggtggcagtccactgcggggcaggtgccagagacaggcaaggtgtct
cagcctcctggcgccacatccttctccttacccggtgactgggacaacagaacctcctat
ttacactctcccttctctactggacggagctgcatccccctccatggtattagtccagag
gtgaatgaactgttgatggaagcccagttgctccaggtatcccttcctgaaattcaggaa
ctttaccagacattacttgcaaagccgagccctgctcagcgagctgaccgaagctctcca
gttggacctggcagtgagaagagtgacagctgccgcgggaagcgagacggagtcagcggt
ctcgagagaaaactgaagagacgcctggaaagagaaggcctctccagtgagcggtgggag
cgagtcaccaaaatgagggcccccaaaaagaagaaagtcaaactgagccaccccaaggac
acgaacaatttcaagttagaaagagagcgtagctgtgagttagtcccttccggcgacact
cactccctgccctcggacacgtcctgctccgagcaggaggactctgaggatgaagacgcc
ctctgcccggccgtgagctgcctgcagccggaaggagatgaggtggactgggtccagtgt
gatggcagctgcagtcggtggttccatcaggtctgtgttggtgtctctcccgagacggcc
gagaaggaggactacgtgtgcgcgcgctgcgctgcgacggacgcaccaggccggagataa

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