Vicugna pacos (alpaca): 102531015
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Entry
102531015 CDS
T08098
Symbol
COL23A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XXIII) chain
KO
K24355
collagen type XXIII alpha
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102531015 (COL23A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
vpc00536
]
102531015 (COL23A1)
Glycosaminoglycan binding proteins [BR:
vpc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102531015 (COL23A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
102531015
NCBI-ProteinID:
XP_031545609
UniProt:
A0A6J3BH55
LinkDB
All DBs
Position
22
AA seq
494 aa
AA seq
DB search
MALQPFRVLPLKTLSWCFTCAFKRQLQCSEERALLRRAGSPDALAAWAEPHLERLLREKL
EGLAKLRTVREAPLECVCPPGPPGRRGKPGRRGDPGPPGQSGRDGYPGPLGLDGKPGLPG
PKGEKGAPGDFGPRGDQGQEGAAGPPGPPGPPGARGPPGDTGKDGPRGAPGPMGPKGEAG
QDGETGLSGPPGPQGHDGAPGQPGVPGPPGPKGEAGSAGPQGENGPDGAPGPKGEPGHPG
AVGAAGPRGSPGLKGEQGDTVVIDYDGRILDALKGPPGPPGPPGLPGLPGAKGELGLPGA
XXXXGFXGPKGQKGDPGEAGPAGPKGEAGEMGLSGLPGTDGPKGEKGEPASDSLQESLAQ
IIVEPGPPGPPGPPGPMGLQGIQGPKGLDGAKGEKGVSGERGPSGLPGPAGPPGLIGLPG
TKGEKGRPGEPGLDGFPGPRGEKGDQSERGEKGERGVPGRKGMKGQKGEPGPPGLDQPCP
VGPDGLPVPGCWHK
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcagcctttcagagtgttgcctttgaagactctgagctggtgcttcacctgt
gccttcaaaaggcagctccagtgttctgaggagcgggcgctgctgcggcgcgcgggctct
ccggacgccctggccgcctgggccgaaccgcacctggagcgcctgctgcgcgagaagctg
gagggactcgccaagctccggacagttcgggaagcaccgttggagtgcgtctgcccccca
ggccccccaggacggcgcggcaagcctggaagaagaggcgatcccggtcctcccgggcaa
tcaggacgagatggctacccggggccactgggtctggatggcaaacccggacttccaggc
cccaaaggggaaaagggtgcaccaggagacttcggcccccggggagaccaggggcaggaa
ggagctgctgggcctccagggccgcctggaccccctggggcccggggacctcctggagac
accgggaaagacggccccaggggagcaccaggccccatgggtcccaaaggagaagctgga
caagacggcgagacgggcctgagtggacccccagggccccaggggcatgatggggcacca
ggccagccaggggtccctggaccaccagggcccaagggcgaagcggggagcgcggggcct
cagggagagaatggcccggatggagccccagggcccaagggggagcccggccacccggga
gccgtcggagccgcggggccacggggttccccaggcctcaagggcgagcaaggagacacg
gtggtgattgactacgatggcaggatcttggatgcccttaagggtcctcctgggccaccg
gggccaccagggctgccagggctgcccggagccaagggcgaacttggacttcccggggct
nnnnnnnnnngtggcttttagggtcccaaaggacagaaaggagacccaggagaggctggg
ccagccggacctaaaggggaagcaggcgagatgggcctgtcaggcctcccgggcaccgac
ggccccaagggggagaagggagagccggcatctgacagcctacaggagagcctggcccaa
atcatagtggagccagggcccccaggcccgcccggtcccccaggccccatgggccttcag
ggaattcagggtcccaagggcttggacggagcaaagggagagaagggcgtgtcgggcgag
agaggccccagcggcctgcctgggccagctggcccgccaggcctcattgggctgccagga
accaaaggagagaagggcagacccggagagccaggacttgatggtttccctggaccccga
ggagagaaaggcgaccagagcgagcgtggagagaagggggagcgcggcgtccccggtcgg
aaaggaatgaaaggccagaagggcgagccaggacccccgggcctggaccagccgtgtcct
gtgggccccgacgggctgcccgtgcctggctgctggcataagtga
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integrated database retrieval system
