Vicugna pacos (alpaca): 102531262
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Entry
102531262 CDS
T08098
Symbol
ERCC6
Name
(RefSeq) LOW QUALITY PROTEIN: DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
102531262 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vpc03036
]
102531262 (ERCC6)
03400 DNA repair and recombination proteins [BR:
vpc03400
]
102531262 (ERCC6)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
102531262 (ERCC6)
DNA repair and recombination proteins [BR:
vpc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
102531262 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
102531262
NCBI-ProteinID:
XP_031538037
LinkDB
All DBs
Position
11
AA seq
1420 aa
AA seq
DB search
MSNERIPHSSQTQDQAGVQSQYVCESEGVTVKRENDGDXELGDSLPSCSSASGPSTSAEG
RLSEVPRLQVESRHFVLFFRSCTTSLRQIDKIIEQLSPQAATNKDISRKLDSVKRQKHNK
EQQLKKITAKQKRLQAILGGAEVRVEIEHASLEEEEADTGPSCLGSMLMPAQETAWEELV
RTGQMTPFGTQIPQKQEKKPRKLMLNEASGFEKYLADQAKLSFERKKQARNKRAARKAAA
PVTSELSSTLSEKPNESSKVLSKTDKRLKKHIRKLQKRARQLQGQVGLPKGRRPLGSDAR
RRAEGDSEGEESEYLPTEEEREEADLSGEGTDCDPGPVLSRGKRQKKVTEQEIDDDFFPS
SGEEADAAGGGGGGRKVVRRRDDGDEDYYKQRLRRWNKLRLQDKEKRLRLEEDSEESEAE
FDEGFKMPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYS
KIRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSFTHKKEKLIR
DIAHCHGILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAITLACKQFRTPHRII
LSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCAC
VLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQSFIDSKEVYRILNGE
LQIFSGLVALRKICNHPDLFSGGPKNVKGVPDEDLEEDQFGYWKRSGKMIVVESLLKIWH
KQGQRVLLFSQSRQMLDILEVFLRARKYSYLKMDGTTAIASRQPLIARYNEDTSIFVFLL
TTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQTKQVTVYRLLTAGTIEEKI
YHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLTSPDTSQSTETSAIFAGTGSDVQTP
KRHLKRKFPPAFGTDPNVPMGKTFPDSNTSANDAASSGEKSAAPGAEVSAVISNPDGPPS
DGPETPRSPAGGERLGEEPDVASRPQESAGTSGNGEGSDSPRVSKTCRAPGEDSIDEREG
LSDKRESCQGPTEPLSENEQTENNFHKHKSKTKHRVAEEETLEKHPRPKQKPKNSRHGRD
AKFEGTRIPHLVKKRQYQRQNAETESETQERSSDDYVLQKLFKKSVGVHSVMKHDAIMDG
ANPDYVLVEAEANRVAQDALKALRLSRQRCLGAASGVPTWTGQRGVAGAPAGRKSRFGQK
RNSSFSVQQPPSASPKEKCQDGTMKKDGKNHVSEHFSGKMEDAESSSGALTSSSLLAKMR
ARNHMILPERLESEGVPLPEAAAPPPSSAEHDDLLVEMRNFIAFQAQVDGQASTREILQE
FESKLSASQSCVFRELLRNLCTFHRTPGGEGIWKLKPEYC
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatgagagaatcccccactcaagtcaaactcaggatcaagccggtgtgcagagt
cagtatgtctgtgagagtgaaggcgtgacagtcaagcgggaaaatgatggcgatngggag
ctgggggacagcctcccttcttgttcctctgccagtgggccatccacttctgccgagggg
cgtctgtctgaagttccgaggttacaagtggaaagtagacattttgtcttatttttcagg
tcatgtacaacatccctaaggcaaatcgataaaattattgaacaacttagccctcaagct
gccaccaacaaagacatcagcaggaaactggattccgtgaaacgacagaagcataacaag
gaacaacaactaaagaagatcacagcaaaacagaaacgtctccaggccatccttggagga
gcagaggtcagagttgaaatagagcatgccagtctggaggaggaggaggcagacacgggg
ccgtcctgcctcggcagcatgctcatgcccgctcaggagaccgcctgggaggagctcgtc
cgcactggccagatgacaccttttggtacccagatccctcagaagcaggagaagaagccc
aggaaactaatgctcaatgaagcatcaggctttgagaagtatctggcagatcaagcaaag
ctgtcctttgaaagaaagaagcaagctcgtaataaaagagcagctagaaaagctgcggcc
ccggtcacttctgaactgagctcaacactcagtgaaaaacccaacgagagcagcaaagtt
ctctcgaaaacagataagcgcttgaaaaagcacatcaggaaactccagaagagggctcgt
cagctgcaggggcaagtggggctgccaaagggaaggagacccttggggtctgacgcgagg
cggagggcagagggcgactctgagggtgaggagtccgagtacttgcccaccgaggaggag
cgcgaggaggccgacctgtcgggggagggcaccgactgtgatccggggccggtgctcagt
cgcgggaaacggcaaaagaaagtcacagagcaggagatcgatgatgactttttcccgagt
tccggggaggaagctgacgctgcaggcggaggaggaggaggtcggaaagtagtgagacgc
cgagatgacggagatgaagattattataagcagcggttaaggagatggaataaactgagg
ctgcaagacaaagagaagcgtctgaggctcgaagaggattctgaggagagcgaggccgaa
tttgacgaaggttttaaaatgccaggttttctgttcaaaaagctttttaagtaccagcag
acaggtgttaggtggctgtgggaattgcactgccagcaggcaggaggaattctgggagac
gaaatgggattgggcaagaccatccagataattgccttcttggcaggtctgagctacagc
aagatcaggactcgtggttcaaattacaggttcgaggggttgggtcccactataattgtc
tgtccaacgacagtgatgcatcagtgggtgaaggaatttcacacgtggtggcctccgttc
agagtggcaattctgcacgaaaccgggtcctttacccacaaaaaggagaaactaattcga
gacatcgctcactgtcatggaattttgatcacttcttactcctacattcgactgatgcaa
gatgatattagcaggcacgactggcactatgtgatcttggacgaaggacacaaaattcgc
aacccaaatgctgccatcacccttgcttgcaaacagttccgcacccctcaccgcatcatc
ttgtcgggttcaccgatgcagaataacctccgtgagctgtggtcgctctttgacttcatc
ttcccagggaagctgggcacgttgcccgtgttcatggagcagttctccgtccccatcact
atgggcgggtattccaacgcctcccccgtgcaggtcaaaactgcttataagtgtgcgtgt
gtcctacgagataccataaatccgtacctgctgaggaggatgaagtcggatgtcaaaatg
agcctttcattgccagataaaaatgaacaggtcttattttgccgactcacagatgagcaa
cataaagtctaccaaagtttcatcgattccaaagaagtttacagaattctcaatggagag
ttgcagattttctctggacttgtggccctaaggaaaatctgcaaccaccctgacctcttt
tctgggggccccaagaatgtgaaaggtgttccagatgaggacctggaggaagatcagttt
ggctactggaaacgttctgggaaaatgatagtcgttgagtccttgttgaaaatatggcac
aagcagggccagcgagtattgctcttttctcagtcaagacagatgctggacatacttgaa
gtattccttagagcccgaaagtattcctacctcaagatggatggtaccactgcgatagct
tcaaggcagccactgattgcacgatacaacgaggacacgtccatatttgtgtttctcctg
accactcgggtgggtggcctcggagtcaacctgacgggggcaaacagagtcatcatctat
gatcctgactggaacccaagcacagacacgcaggcccgggagcgcgcatggaggattggc
cagacgaagcaggtgacggtgtacaggctgctgaccgcgggcaccatcgaggaaaagatt
taccaccgacaaatcttcaagcagtttttgacaaatcgagtcctaaaagacccaaagcaa
agacggtttttcaagtccaatgacctttatgagctgtttactctgactagtcccgataca
tcccagagcactgaaacgagtgctatatttgcaggaactggttcagatgttcagacaccc
aaacgccatttgaaaagaaaatttccaccggcctttggaacggaccctaacgtcccgatg
ggcaaaacgtttcctgattctaacacatctgcaaatgatgccgcgtcctctggagagaaa
tctgcagctccaggcgctgaagtgagtgcagtcatttctaatccagatggtcctccgagc
gatggccccgagacacctcgcagtcccgccggcggggagagacttggagaagagccggat
gtggcgtccagaccacaggagtcagcagggacgagtggaaacggggaaggttcagattct
ccaagagtcagcaaaacatgcagggcgcctggtgaggacagcatcgatgagagggagggt
ctttctgataaaagagaaagctgccagggtccgacagaacctctttcggagaatgagcaa
acagaaaataattttcacaagcacaagtcaaaaacgaagcatcgtgtggcagaggaagag
accctggagaaacatccgaggccgaagcaaaagcctaagaactctagacatggcagagat
gccaagttcgagggaacccgaatcccacacctcgtgaagaagaggcagtaccagaggcaa
aacgctgaaactgagagtgagacccaggaacgcagcagtgacgattatgttctgcaaaag
cttttcaaaaaatcagtcggcgtgcacagtgtcatgaagcatgatgccatcatggatgga
gccaatccggactacgtgctggtggaggcggaggccaaccgcgtggcccaggatgccctc
aaagcgctgaggctctcccggcagcggtgtctgggagcggcgtccggtgttcccacctgg
accggccaaaggggtgttgccggtgcaccagcaggaagaaagagccgatttggtcagaaa
aggaattccagcttctctgtgcagcagcctccttcagcatctccgaaggagaaatgccag
gatggcacgatgaaaaaagatggaaaaaaccatgtttctgagcattttagtggaaaaatg
gaagatgcagagtcttcatccggggccctgacttcatcctcactgttggctaaaatgaga
gctcgaaaccacatgattttgccagagcgcttagaaagtgaaggtgtgccccttccagag
gctgccgccccgccgccctccagcgcagaacacgatgacctgctggtagaaatgagaaac
ttcattgcctttcaggcccaagtcgatggccaggccagcactcgggagatactgcaggag
ttcgaatccaaattatcagcgtcacagtcttgtgtctttcgagaactgttgagaaatctg
tgcacttttcatagaactccgggtggcgaaggaatttggaaactcaagccagaatactgt
tga
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integrated database retrieval system
