Vicugna pacos (alpaca): 102531334
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Entry
102531334 CDS
T08098
Symbol
NUP85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03013
Nucleocytoplasmic transport
vpc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102531334 (NUP85)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102531334 (NUP85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpc03019
]
102531334 (NUP85)
03036 Chromosome and associated proteins [BR:
vpc03036
]
102531334 (NUP85)
Messenger RNA biogenesis [BR:
vpc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102531334 (NUP85)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
102531334 (NUP85)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleopor_Nup85
TPR_4
TPR_16
TPR_14
Motif
Other DBs
NCBI-GeneID:
102531334
NCBI-ProteinID:
XP_006199439
UniProt:
A0A6I9I1F4
LinkDB
All DBs
Position
16
AA seq
656 aa
AA seq
DB search
MEELDGEPTVTLIPGMNSQKKQICFDWGPGEMLVCETSFNKKEKSEVVPGCPLIYIVRKD
VDVYSQILRKLFNESHGIFVGLQRIEEELTGKSRKAQLVRVSKNYRSVIRACMEEMHQVA
IAAKDPASGCQFSSQVSILSAMELIWNLCEILFIEVAPAGPLLLHLLDWVRLHVCEVDSL
SADVLGSENPSKHESFWNLVTVLVLQGRLDEARQMLSREADASPTSAGMCRILGDLMRTM
PVLSPGNTQTLTELELKWQHWHEECERHLQDGTFASSPHLESLCKIMLGDEAALLEQKKL
LSNWYHFLVTRLLYSHPTVKPMDLYFYAQSSLDLFLGGESSPEPLDNILMAAFEFDIHQV
IKECSIALSNWWFVAHLTDLLDHCKLLQSHNLYFGSNMREFLLLEYASGLFAHHSLWQLG
VDYFDYCPELGRVSLELHIERIPLSTEQKALKVLRVCEQRQMTEQVRSICKILAMKAVRN
NRLGSALSWSIRAKDAAFATLVSDRFLRDYCERGCFSDLDLIDNLGPAMMLSDRLTFLGK
YREFHRLYGEKRFVDAASLLLSLMTSQIAPRSFWMTLLTDALPLLEQKQVIFSAEQTYEL
MRCLEDLTSGKPVCGEPDPQRLQDDDIETTKVEMLRLALARNLARSIIKEGSLEGS
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcttgacggcgagccgacagtcactttgattccaggaatgaattcccagaag
aagcaaatctgttttgactggggcccaggggagatgctggtgtgtgaaacctccttcaac
aaaaaagaaaaatcagaggtggtgccaggttgccccttaatctatatcgtcaggaaggat
gtagatgtttactctcaaatcctgagaaaactcttcaatgaatcccatggaatctttgtg
ggcctccagagaattgaagaagaattgactggaaaatccagaaaagctcaattggttcga
gtgagcaaaaactaccgatccgtcataagagcatgtatggaggaaatgcaccaggttgca
attgctgctaaagatccagccagtggctgccagttcagcagccaggtctccattttgtca
gcaatggaactcatttggaacctttgtgagattctttttattgaagtagccccagctggc
cctcttctccttcacctccttgactgggtccggctgcacgtgtgtgaggtggacagtttg
tcagcagatgttctgggcagtgagaatccaagcaaacatgagagcttctggaacttggtg
actgtcttggtgctgcagggccggctggacgaggctcgacagatgctctccagggaagct
gacgccagccccacctctgcaggcatgtgccgaatcctgggggacctgatgaggacaatg
cccgttctcagtcctggtaacacgcagacgctcacagagctggagctgaagtggcagcac
tggcatgaggaatgtgagcggcacctccaagatggcacgtttgcctccagtcctcacctt
gagtctctctgcaagatcatgctgggagacgaagctgccctgttagagcagaagaagctt
ctgagtaactggtatcatttcctagtgacccggctcctgtattctcatcccacagtaaaa
cccatggatctgtacttttatgcccagtcgagccttgacctgtttctgggaggtgagagc
agcccagaacccctggacaacatcttgatggcggccttcgagtttgacatccaccaagtg
atcaaggagtgcagcatcgccctaagcaactggtggttcgtggcccatctgacggacctg
ctggatcactgcaaactgctccagtcacacaacctctactttggatccaacatgagagag
ttcctcctgctggaatatgcctcaggactgttcgctcatcacagcctctggcagctggga
gtggattactttgattactgccctgagctgggccgagtttccttggagctgcatattgag
cggatccctctgagcacagagcagaaagcccttaaggtgctgcgggtttgtgagcagcgg
cagatgactgaacaagttcgcagcatttgtaagatcttagccatgaaagctgttcgcaac
aatcgcctgggttctgccctctcttggagcattcgagctaaagatgccgcctttgccacg
ctggtgtcagacagattcctcagggattactgtgagcgaggctgtttttctgatttggat
ctcattgacaacctggggccagccatgatgctcagtgatcgactgaccttcctgggaaag
taccgcgagttccaccggttatacggggagaagcgtttcgttgatgccgcttctcttctc
ctgtcattgatgacttctcagattgccccacggtctttctggatgacgcttctaacagat
gccctgccccttctggaacagaaacaggtgattttttcagcagagcaaacatatgagctg
atgaggtgtctggaggacttgacttcaggaaagccagtgtgtggagagcctgatccccag
cgactccaggatgacgacatagagaccaccaaagtggaaatgctgagacttgctcttgca
cgaaatcttgctcggtcaattataaaagaaggctcgctggaaggttcctga
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