KEGG   Vicugna pacos (alpaca): 102531430
Entry
102531430         CDS       T08098                                 
Symbol
EXOSC2
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
vpc  Vicugna pacos (alpaca)
Pathway
vpc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102531430 (EXOSC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vpc03019]
    102531430 (EXOSC2)
Messenger RNA biogenesis [BR:vpc03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     102531430 (EXOSC2)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     102531430 (EXOSC2)
SSDB
Motif
Pfam: RRP4_S1 KH_6 ECR1_N RRP40_S1 ECR1_N_2 EXOSC1
Other DBs
NCBI-GeneID: 102531430
NCBI-ProteinID: XP_031533531
UniProt: A0A6J3ALM8
LinkDB
Position
4
AA seq 293 aa
MAMEMRLPVPRKPVSESLGRETKKHLVVPGDTITTDTGFMRGHGTYMGEEKLIASVAGPV
ERVNKLICVKALKTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGEL
RRRSAEDELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVPPSLVK
RQKTHFHDLPCGASVILGNNGFIWIYPTPEHKEEDAGGFIANLEPVSLADREVISRLRNC
IVSLVTQRMLLYDTSILYCYEASLPHQIKDILKPEVMEEIVMETRQRLLEQEG
NT seq 882 nt   +upstreamnt  +downstreamnt
atggcgatggagatgaggcttcccgttccccgcaagcctgttagcgagagcctggggcgc
gaaactaagaagcacctggtggtgccgggggacacgatcaccacggacacaggcttcatg
cggggccatggaacctacatgggggaagagaaactcattgcatcggtggctggccctgtg
gagagagtaaacaagttgatctgtgtgaaagctttgaaaaccagatacaatggtgaagtg
ggagacattgtcgtggggagaatcacggaggttcaacagaagaggtggaaggtggagacc
aactccaggctggattcagtcttgcttctctcgtccatgaaccttcccggaggagagctg
aggagaagatctgcagaagatgagctggcgatgagaggtttcttgcaggaaggggacctt
atcagtgctgaggtccaggcagtgttctctgatggagccgtctctctgcacacgaggagt
ctcaagtatggaaaactagggcagggtgttttggttcaggttcccccctccctggtgaaa
cggcagaagactcacttccatgacttgccatgtggcgcctcagtgattctgggcaacaac
ggcttcatctggatctacccaacacctgagcacaaagaggaggatgcagggggcttcatc
gcaaacctggagcctgtctcccttgctgatcgagaggtgatctcccggcttcggaactgc
atcgtctcgctggtcactcagaggatgctgctgtatgacaccagcatcctgtactgctat
gaagcctcccttccacatcagatcaaagacatcttaaagccagaagtaatggaggaaatt
gtgatggaaacacgccagaggcttttagaacaggagggataa

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