Vicugna pacos (alpaca): 102531536
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Entry
102531536 CDS
T08098
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04270
Vascular smooth muscle contraction
vpc04360
Axon guidance
vpc04611
Platelet activation
vpc04625
C-type lectin receptor signaling pathway
vpc04810
Regulation of actin cytoskeleton
vpc05135
Yersinia infection
vpc05152
Tuberculosis
vpc05163
Human cytomegalovirus infection
vpc05200
Pathways in cancer
vpc05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
102531536 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
102531536 (ARHGEF12)
04625 C-type lectin receptor signaling pathway
102531536 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
102531536 (ARHGEF12)
09158 Development and regeneration
04360 Axon guidance
102531536 (ARHGEF12)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102531536 (ARHGEF12)
05205 Proteoglycans in cancer
102531536 (ARHGEF12)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
102531536 (ARHGEF12)
09171 Infectious disease: bacterial
05135 Yersinia infection
102531536 (ARHGEF12)
05152 Tuberculosis
102531536 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vpc04131
]
102531536 (ARHGEF12)
Membrane trafficking [BR:
vpc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
102531536 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
AAA_23
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
102531536
NCBI-ProteinID:
XP_015097618
UniProt:
A0A6J0ALI6
LinkDB
All DBs
Position
33
AA seq
1544 aa
AA seq
DB search
MSGTQSTITDRFPLKKPIRHGSILNRESPTDKKQKVERSASHDFDPTDSSSKKTKSSSEE
SRSEIYGLVQRCVIIQKDDNGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGT
LVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSEVEPSVTGHMSPIMTSPHSPG
ASGNMERITSPVLMGEENNVVHNQKVEILRKMLQKEQERLQLLQEDYNRTPAQRLLKEIQ
EAKKHIPQLQEQLSKATGSAQDGAVVTSSKPLGDTLTVSEVEADPGDGPGRSDYSSGDAS
RPSSDSADSPKSGLKERIYLEENPEKSEVIQDTDTQSLIGSPSTRIAPHIIGAEDDDFGT
EHEQINGQCSCFQSIELLKSRPAHLAVFLHHVVSQFDPATLLCYLYSDLYKQTNSKETRR
VFLEFHQFFLDRAAHLKVSVPDEISVDLEKRRPELIPEDLHRHYIQTMQERVHPEVQRHL
EDFRQKRSMGLTLAESELTKLDAERDKDRVTLEKERACAEQIVAKIEEVLMTAQAVEEDK
SSTMQYVILMYMKHLGVKVKEPRNLEHKRGRIGFLPKIKQSMKKDREGEEKGKRRGFPSI
LGPPRRPSRHDNSAIGRAMELQKQRHPKHLTTPSSVSPEPQDSAKLRQSGLASEGADIGY
LPANSMSSIVSGATLSQEGGKENDMGSKQVGETPASGDSLDGVPRTPNTIFDFPPPPLDQ
VQEEEWEVERVTEHGTPKPFRKFDSIAFGESQSEDEQFENDLETDPPNWQQLVSREVLLG
LKPCEIKRQEVINELFYTERAHVRTLKVLDQVFYQRVSREGLLSPSELRKIFSNLEDILQ
LHVGLNEQMKSVRKRNETSVIDQIGEDLLTWFSGPGEEKLKHAAATFCSNQPFALEMIKS
RQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTEWPMEREKV
KKAADHCRQILNYVNQAVKEAENKQRLEDYQRRLDTSSLKLSEYPNVEELRNLDLTKRKM
IHEGPLVWKVNRDKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVI
KLNTVLVRQVATDNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQSTK
PIPLPQSPPCEGDNDEEEPPKLKGEHHGISVTGLQSPDRDLGLESPLISSKPQSHSLGTS
GKSEVDDLFVAERQFAKEQHADGTLKEAGVNYQITIPGPHLPVSEERWALDALRNLGLLK
QLLVQQLGLTEKSTQEDWPRFPRCRTASLGAQADCGTQNSDNIKAYPPGEGRMPFRTGTG
DISTCYSPRTSTESSAPRDSVVLAFQDSQASNILVMDHMIMTPEMPPAEPEGGLDESGEH
FFDAREAHSDDNPSEGDGAVKKEEKDVNLRISGNYLILDGYEAVQESSTDEDVASLLPPQ
PVTGIPSMDPTHQQQHSPQNAHSDGAVSPFTPEFLAQQRWGAMDDSCFEIQSPSSCADAQ
SQIMDYIRKIETDLEHLKKVEESYTILCQRLAGSALTDKHSDKS
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtctactatcaccgacaggtttcccctcaaaaaacctataaggcat
ggaagtattttgaaccgagagtcaccaacagataagaagcagaaagttgaacgcagtgca
tcacatgattttgatcccacagatagctcctccaagaagacaaagtctagttcagaggag
agtagatccgagatatatggtcttgttcagcgttgtgtgatcatccagaaggatgacaat
ggatttgggctgacggtcagtggagacaatccagtcttcgtacagtctgtcaaagaagat
ggagcagccatgcgggctggagtacagacaggtgatcggatcatcaaggtgaatggaaca
ctggtgactcattcaaaccatttggaagtggtgaagctaatcaaatcgggttcctatgta
gctcttactgttcagggacgcccacctgggtcgccccagattccacttgccgattccgaa
gtagagccgtcagtcactggacatatgtctcccatcatgacatcccctcattcacctgga
gcatctgggaatatggagagaattactagtcctgtgctcatgggggaggaaaacaatgtg
gttcataaccagaaagtagaaattctaagaaaaatgttacagaaagaacaggaacggcta
cagttattgcaggaagattacaaccgaacacctgcccaaaggttgctaaaagagatccaa
gaggccaagaaacacattcctcagctgcaagagcagttatccaaagccacaggctctgct
caggatggagctgtagttacatcctccaagccattaggtgacacactaacagtcagtgaa
gtagaagcggatcctggtgatggaccaggcagaagtgactatagcagtggagatgcttct
cggcccagtagtgacagtgcagatagtcccaagagtggcctgaaagagaggatttatcta
gaggaaaatccagagaaaagtgaagtaattcaggacactgacactcaatcacttatcggg
agcccctctactcgtatagcacctcatattattggagcagaggatgatgactttggtact
gaacatgaacagatcaatgggcagtgtagctgtttccagagcattgaactgctaaaatct
cgccctgctcacttggctgttttcttacaccatgtagtttcacagtttgaccctgcaaca
ttgctctgttatctctattcagacctttataaacagaccaattccaaggagactcgtcgt
gtcttccttgagtttcatcagttcttcctggatcgagctgcacacctgaaagtttctgtt
ccagatgaaatatcagtagatctagaaaaaagaagacctgaacttattcctgaggatcta
catcgccactatatccaaaccatgcaagaaagagtccacccagaagtccagaggcacttg
gaagattttcggcagaaacgtagcatggggctgaccttggctgaaagcgaactgacgaaa
cttgatgcagagcgagataaggaccgggtaactttggagaaggaacgggcatgtgcggaa
cagattgttgccaaaattgaagaagttttgatgactgctcaggctgtggaagaagataag
agttcgacaatgcagtatgttatcctcatgtacatgaagcatttgggagtaaaagtgaaa
gaacctcgaaatttggagcacaagcggggtcggattggattccttcccaaaatcaagcaa
agtatgaagaaagatagggaaggagaagaaaaagggaagcgaagaggattccccagcatc
ctgggacccccaaggagaccaagccgtcatgacaacagtgcaattggcagagctatggaa
ctacagaagcagcgccaccctaagcacttaaccacaccctcatctgtgagtcctgaacct
caggactctgctaaattgcgccagagtggattagcaagtgaaggagcagacattggatac
ctgccagccaattccatgtcctccatagtttcaggggccactctttcccaggaaggaggg
aaagagaatgatatgggatcaaagcaagttggagaaaccccagcatctggagactcctta
gatggcgtacctcgtactcccaataccatctttgatttcccacctcctccattagaccag
gtgcaggaggaggaatgggaagtagaaagggtgactgagcatgggacaccaaagcccttt
agaaagttcgacagcatagctttcggagaaagtcaaagtgaggatgaacagtttgaaaat
gacttagagacagatccacccaactggcaacagctcgttagtcgagaagtgttactggga
ctaaagccttgtgagatcaaaagacaggaagtaattaatgaattgttctatactgaaaga
gctcatgttcgaacactgaaagttctagaccaagtgttctatcagcgagtgtccagagaa
ggacttctgtcaccttcagaactccggaaaattttttcaaacttggaagatattcttcaa
cttcacgttgggttgaatgagcagatgaagtctgttcgaaagaggaatgaaacctctgtt
atcgatcagattggggaagacttgctgacctggttcagtggacctggggaggaaaagtta
aaacatgctgctgctaccttttgcagtaaccaaccctttgccctggaaatgatcaagtct
cgtcagaaaaaggattctcgattccagacttttgtgcaagatgctgagagtaatccactg
tgtcgtcgtctgcagctgaaggatatcattcccacccaaatgcagaggctcactaagtac
cctcttctgttggataatattgccaaatacacagaatggccaatggaaagggagaaggtg
aagaaagctgcagatcactgtcgtcaaatcttaaattatgtaaatcaggctgttaaggag
gcagaaaataagcagcgcttagaagattatcagcgtcgccttgatacctccagtctgaag
ttgtcagagtacccaaatgttgaagagctcaggaatttggatttaacaaaaaggaagatg
attcatgaagggccattggtttggaaggtgaacagagataaaactattgatctttacaca
ctgctgctggaagatattcttgtattattacaaaagcaggatgatagactggtgttaagg
tgtcatagtaaaattctggcgtctacagctgatagtaaacacacatttagccccgtcatt
aagttgaatacagtgttggttcgacaagtggcaacagataacaaagctttattcgtcatc
tccatgtctgacaatggagcccaaatttatgaactggtggcacagacagtttctgagaag
actgtctggcaggacctaatctgtcggatggctgcatcagtgaaggagcaatccacaaag
ccaattccactgccacagtcaccaccttgcgaaggagacaacgatgaagaagaacctcca
aaattaaaaggggaacatcatggcatttcagtcactggtctgcagagtccagacagagat
ttgggattagagtcccccttaatatcgtcaaaacctcagtctcattcattgggtacctct
gggaaatcggaggtagatgatctctttgtggctgagagacagtttgcaaaggagcagcat
gcagatgggactctgaaggaagccggagtgaattaccaaatcacgatcccaggtccacac
ttgcctgtctcagaagagcggtgggcattggatgcactaaggaatttgggtttgttgaag
caactgctggtacaacagctgggtttgactgagaagagcactcaggaagactggccgcgt
ttcccaagatgcaggactgcgtccctgggggcgcaggcagactgtggaacccagaactct
gacaatattaaggcctatccccctggtgaaggacggatgccctttagaactggaactggt
gacatttccacttgttacagcccacggacttcaactgaatcttctgctccacgggattca
gtggtactggcattccaagatagccaggcaagtaacattttagtaatggaccacatgatt
atgaccccagagatgcctcctgcagagccagaagggggtcttgatgagagtggagagcac
ttttttgatgcccgtgaagcacatagtgatgataatccatcagaaggtgatggagcagtt
aaaaaggaagagaaggatgttaatttgcgcatctcaggaaactatttgatccttgatggc
tacgaagcagtgcaggagagctccacagatgaggatgttgcttccttgcttcccccacag
cccgtgacaggcatcccctccatggaccctacccaccagcagcaacattctccccagaac
gctcattctgatggggcagtttcaccgttcaccccagagttcctggcccagcagcgctgg
ggagcgatggacgattcctgttttgagattcagagtccctcctcttgtgcagatgcacaa
agccagatcatggactacattcgtaagatagagactgaccttgaacacttaaagaaagtg
gaggaaagttacaccattctttgccaaaggctggctggatcagccctcacagacaagcac
tcagataaaagttag
DBGET
integrated database retrieval system
