KEGG   Vicugna pacos (alpaca): 102531770
Entry
102531770         CDS       T08098                                 
Symbol
HLTF
Name
(RefSeq) helicase-like transcription factor isoform X3
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
vpc  Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vpc04121]
    102531770 (HLTF)
   03400 DNA repair and recombination proteins [BR:vpc03400]
    102531770 (HLTF)
Enzymes [BR:vpc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102531770 (HLTF)
Ubiquitin system [BR:vpc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    102531770 (HLTF)
DNA repair and recombination proteins [BR:vpc03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    102531770 (HLTF)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 DEAD zf-RING_UBOX zf-RING_2 RING_XB3-XBAT31 zf-RING_5 ResIII zf-ANAPC11 zf-C3HC4_4 HDA2-3 zf-Nse zf-rbx1 Prok-RING_4
Other DBs
NCBI-GeneID: 102531770
NCBI-ProteinID: XP_006202849
UniProt: A0A6I9I6H6
LinkDB
Position
1
AA seq 1007 aa
MSWMFKRDPVWKYLQTVQYGIHGNFPRLSYPTFFPRFEFQDIIPPDDFLTSDEELDSVLF
GTLRGHVVGLRYYTGVVNNNEMVALQREPNNPYDKNAVKVNNVNGNQVGHLKKDLAAALA
YIMDNKLAQIEGVVPFGANNAFTMPLYMTFWGKEENRKAVLDQLKKHGFKLGPAPKTLGF
SLESGWGSGRAGPSYSMPVHAAVQMTTEQLKTEFDKLFEDLKEDDKTHEMEPAEAVETPL
LPHQKQALAWMISRENSEELPPFWEQRSDVYYNTITNFSEKDRPENVHGGILADDMGLGK
TLTAIAVILTNFHDGKSLPVERTKKNLKKECNVYNESMKLGGNNTSEKADGLIKGSRCSG
GPSISDDKGKNKYPKSELSSSRPKRRKTVIQYTESSDSEEIETSELPQKMKGKLKNTQSE
IKIRVKAGSSKVKEDAEFACALTSSTPATKKKMLKKGASAVEVSKKADVEERPRTTLIIC
PLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRVRDPALLSKQDIVLTTYNILTHDYGTKG
DSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLEAERRWVLTGTPIQNSLKDLWSLLSF
LKLKPFLDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLELPERK
VFIQHITLSEEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTHLL
TNAVSSSGPSGNDTPEELRKTLIRKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCKP
CICQVIQNEQPHAKCPLCRNDIHGDNLLECPPEELACDTEKKSNMEWTSSSKINALMHAL
IDLRKKNPNIKSLVVSQFTTFLSLIETPLRASGFVFTRLDGSMAQKKRVESIQCFQNTEA
GSPTIMLLSLKAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIV
KDSVEENMLKIQNTKRELAAGAFGTKKTNASDMKQAKINEIKTLIDL
NT seq 3024 nt   +upstreamnt  +downstreamnt
atgtcctggatgttcaagagagatcctgtttggaagtacttgcagactgtacagtacgga
atccatggaaattttccacgcctttcatatccaactttctttccccgttttgaattccaa
gatattattcctccagatgacttcctaactagtgatgaagagcttgattctgttttattt
ggaactttgagaggtcatgtagttggtctacgctattacacaggagtagttaataataac
gaaatggttgcattacaacgagagcccaataacccctatgataagaatgcagttaaagta
aacaatgtgaatggaaatcaggttggccatttaaagaaagatcttgcagctgctttggcc
tatatcatggacaacaaattggcacaaattgaaggggtagttccttttggtgcaaacaat
gcttttaccatgcctctttatatgaccttttggggaaaagaagaaaatagaaaagcagtt
ttagatcagttgaagaaacatggatttaaattgggtcctgcaccaaaaactttaggattc
agtttggaaagtggttggggctctggaagagctggaccaagctatagtatgccagttcat
gctgcagtacagatgacaactgaacagctaaaaacagaatttgacaaattgtttgaagat
ttaaaagaggatgataaaactcatgaaatggaaccagctgaggctgttgaaacaccgttg
cttccacatcaaaaacaagctctagcttggatgatttcacgggaaaacagtgaagaactt
ccaccattctgggaacaacgaagtgacgtatactataacacaataacaaatttttctgag
aaggaccgaccagaaaatgttcatggaggaattttagctgatgatatgggtttgggcaaa
actctgacagccattgcagtgattcttaccaacttccatgatggcaaatctcttcctgtt
gaaagaactaaaaaaaatctgaagaaggaatgtaatgtttacaatgaatctatgaaactt
ggagggaacaataccagtgaaaaggctgatggactaattaaaggatctagatgtagtgga
ggacccagtatttcagatgacaagggaaagaataaatatcccaagtcagaattgtctagc
tcccgccccaaaaggagaaaaactgttatacagtacactgaaagcagtgactcagaggaa
attgagacaagtgaattgccacagaaaatgaaaggcaaattgaaaaatacgcaatcagag
attaaaatcagagtaaaagcaggttcttctaaagttaaagaagatgcagagtttgcatgt
gcacttacttcatctacccctgcaacaaaaaagaaaatgttgaaaaaaggagcatctgca
gtggaggtttcaaagaaagctgatgttgaagagagaccaagaacaacactgatcatctgt
ccactttctgtgttgagcaactggattgatcagtttggacaacatataaaatcagatgtg
cacttgaatttttatgtttattatggtcctgatcgtgttagagacccagccttgctttca
aagcaggatattgttttaactacatacaatattttaactcatgactatggaactaaaggt
gatagtccattacatagcataaggtggctaagagtgatcctggatgaaggacatgccata
cgaaatccaaatgctcagcagacaaaagctgtacttgatttagaagcagaaagaagatgg
gtattgacaggcactccaatccagaattctttaaaggacttgtggtctcttctttccttt
ttaaaacttaaaccatttcttgatagagaatggtggcatagaacaatacagcgtcctgtc
acaatgggagatgaaggaggacttaggcgtttacagtccctaattaaaaatattacactt
agaagaacaaagacaagcaaaattaaaggaaaacctgttttggagttaccagaacgtaaa
gtatttattcagcacattacactttcagaggaagagagaaagatttatcagtctgtgaaa
aatgaaggcagagctactattggaaggtattttaatgaagggactgtccttgcacactat
gcagatgtcctgggtcttttgcttagattgcggcagatttgttgtcatactcaccttctt
acaaatgcagtgtcttccagtggtccctcaggaaatgatacacctgaagaactacggaag
acattaataaggaagatgaagttaattctgagctcaggttccgatgaagaatgtgcaatt
tgcttggattctttaacagttcctgtcataacacattgtgcacatgtcttttgtaaaccc
tgtatttgccaagtcattcagaatgagcagccacatgctaaatgccctttatgcagaaat
gatatacatggagacaatttattagaatgtcctccagaagaactggcatgtgacactgag
aaaaagtctaatatggaatggacgtccagttcaaagattaatgctctaatgcatgcattg
attgacttaagaaagaagaaccccaacataaaaagtttagttgtttctcagtttacaaca
ttcctgtctttaatagaaacaccactcagagcttctggatttgtatttactcgtttggat
ggttccatggcccaaaagaaaagagtggaatcaattcagtgttttcaaaacactgaagct
ggatctccaactataatgcttctatccttaaaagcaggtggagttggtttgaatctttct
gcagcttctcgagtgtttttaatggatccagcctggaatccagcggctgaagatcagtgc
tttgacagatgccatagacttggccagaagcaagaagttatcatcacaaaattcattgtg
aaggactctgttgaagaaaatatgctgaaaatacaaaacacaaagagagagcttgcagct
ggagcctttggaactaaaaaaacaaatgctagtgacatgaaacaagctaaaattaatgaa
atcaaaactttgattgatttgtaa

DBGET integrated database retrieval system