Vicugna pacos (alpaca): 102531918
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Entry
102531918 CDS
T08098
Symbol
AP5B1
Name
(RefSeq) LOW QUALITY PROTEIN: AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpc03400
]
102531918 (AP5B1)
DNA repair and recombination proteins [BR:
vpc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
102531918 (AP5B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
102531918
NCBI-ProteinID:
XP_031546758
UniProt:
A0A6J3BLZ4
LinkDB
All DBs
Position
25
AA seq
926 aa
AA seq
DB search
MCSPHASPFKRPAQPLPELLPCGDPGGLPQRHPRRLSVSFWDPGPACLTMGPLSRENWAQ
RVATFRASPSAFMAGPEGEDLGRDLLSDLRSEKLSEQTKVSLLSLSLEYPAQLWPDAPAA
EAAATSLLDTLVLLHPRPSALRRPLLLAATTALAAGGALGPTSGASRRLLPLLLGLAAGR
DLGRGFGPASEQRPLQATACECLRELESCKPGLLGGCLGLLRGLMGQEGPIQPLSLLLAL
ALRNTLVIKAKARAGLQGLLVAGNSPTEGSPWNWTLAEEGDAHLQPHAPSWSAAEEGECG
LAVLEPSPEEARELRAAVAQLLDTSYLLTPAAQAQLLWLLGWAVRGLRGQPPVLFKPQLV
RLLGTAQLTLLHAVLALKAAFGEALFTAQDEALLLRRLTLAAQHPALPLPAHLFYLHCLL
SFPENWPLGPTGEEAVPLLLGSQLCRGLLPSLLHDPMALLARLHLLCLLCVEDEEKEEKG
QDQSLRCYLEELLAGLRQRAALNGGPRALAILCFQASYLVVCCLAGQPIVLTPLTHGLAQ
LYRAQPALAPHFVDLLDRVGPELGEPLRVALRQEVVSRPGKDEVLRWHLQMLAKVADEDA
QSATLSFLQAAAAHCLDWGLQQALLQVCRALLRAGVGGGLADLLQVLARQLEDPDGRDHA
RLYYILLAHLSGPKLGMALGPSLAAPALASSLVAENQGFAAALMVQEAPAPIRLSIGPRR
AEGPVPVLQLQVEVLEPVYSLELRFHVERQLYAPVGAVHVPCLCPGRPTSPLLLPLQPRR
PAPTRLDVRALYTTPTGLTCHAHLPPLPVNFADLFLPFPQPPEGAKVGFFEELWDSCLPE
GTESQLWCPLGPHGLEALVSCHLEPFVVVAQAPTSYCIAIRLPPDSRLLLRLEAAHADGV
PVALRTDDWAVLPLVGAYLRGLSAAV
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgtgctctccgcacgcatccccgttcaagcggcccgcccagcccctccccgagctcctc
ccctgcggggaccctggcggtctgccccagcgtcatccccgaaggctttcggtttctttt
tgggacccgggacctgcgtgcctgacgatggggcccctgagccgggaaaactgggcccag
cgcgtggctaccttccgggccagcccgtccgccttcatggcaggtcccgagggtgaggat
ctgggtcgtgacctgctgagcgacttgaggagtgagaagctgagcgaacagactaaggtt
tctttgctgtctctgagcttggagtacccagcccagctgtggccggacgcccctgccgcc
gaagcagccgccacctccctgttggataccctggttcttctacacccgcggccctcggct
ctgcggcggcccctgctgctggcggccaccacagccttggcggcaggaggtgcgctgggc
cccacctcgggagcctcccgccggctcttgcccctgctgcttggcttggccgcgggccgc
gacctggggcgaggttttggcccggcctcggaacagcgccccctgcaagccacagcgtgc
gagtgcctgcgggagctggagagctgcaagcctgggctgctagggggctgcctggggttg
ctgcggggcctgatggggcaagagggccccatccagccactcagcctgctgctggcactt
gctctgcgaaacaccttggtgataaaagccaaggccagggccggcctgcagggcctgctc
gtggctggcaactctcccactgagggtagtccctggaactggacactggctgaggagggt
gatgcccaccttcagccccacgcccccagttggtcagcagctgaggagggggagtgtggt
cttgctgtgctagagcccagtcctgaggaggcccgggagctgcgggctgctgtggcccaa
cttctggacacctcctacctgctcactcctgcagcccaggcccagcttctgtggctgctg
ggctgggccgtgcggggtcttcggggacagccaccagtgctcttcaaaccacagctggta
cggctgctgggcacagcacagctgacgctgctgcatgccgttctggctctcaaggcggcc
tttggtgaggcgctgttcacggcccaggatgaggccttgctgcttcgccggctcaccctg
gctgcccagcacccagccctgcccctgcccgcccatctcttctacctgcactgcctcttg
agcttccctgagaactggccactgggccccacaggagaggaggctgttccattgctgctg
gggtcccagttgtgccgtggcctcctgcccagtctcctgcatgacccgatggccctcctg
gcccgcctgcatctgctgtgcctgctctgtgtggaagacgaagaaaaggaggagaaaggc
caagatcagagcctccggtgctacctggaggagctactggctggcctgcggcagagggca
gccctgaatgggggcccccgggccttggccattctctgcttccaggcctcatatctagtt
gtttgctgcctggctgggcagcctatagtcctgacacccttgacccacggactggcccag
ctgtaccgagcccagcccgcactggctccccattttgtagatctcttggatcgggtgggc
cctgagctgggggagcccttgagggtggccttgcggcaggaggtggtgtccaggccaggc
aaggatgaggtccttcgttggcacctgcagatgctggcaaaggtggcagatgaggatgcc
cagagtgccaccctcagcttcctgcaggctgcggctgcccactgcttggactggggcctt
cagcaggccctactacaggtctgccgggccctgctgcgggcaggtgtcgggggaggcctg
gctgacttgctgcaggtgctggccaggcagctggaggaccctgacgggcgggaccatgct
cgcctttactacatcctcctggcccacctgtcagggcccaagctggggatggccttgggt
ccctcacttgctgcacctgcactggcctcttcactcgtagctgagaaccagggctttgct
gcggcattgatggtgcaggaggccccagccccaattcggctaagcataggtccccgcaga
gctgagggaccggtcccagtgctacagctccaggtggaggtgctggagccagtgtattcg
ctggagctgcgcttccatgtggaaagacagctctatgcacctgtaggggctgtccacgtg
ccctgcctatgccctggccgccccaccagccctctcctgctgcctctgcagccccgacgc
ccagctcccacaaggctggatgtgcgcgccctgtacaccacacccactggcctcacctgc
catgctcacctgccacccctgcctgtgaactttgctgatctctttctgcctttcccccag
cctcctgagggggctaaggtgggcttctttgaggagctttgggactcctgccttccagag
ggcaccgaaagccagttgtggtgccctcttgggccgcatgggctggaggccttggtgtcc
tgccacctggagccctttgtggtggtggctcaggcccctactagctactgcatagctatc
cgtctgcccccagactcaaggttgctgttgcggctggaggcagcccacgcggacggagtg
cctgtggccctgcggactgatgactgggctgtgctgcccctggtgggagcctatctccgt
gggctgtcagctgctgtctga
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