Vicugna pacos (alpaca): 102531970
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Entry
102531970 CDS
T08098
Symbol
WDTC1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vpc04121
]
102531970 (WDTC1)
Ubiquitin system [BR:
vpc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
102531970 (WDTC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
TPR_19
TPR_1
TPR_2
TPR_17
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
TPR_11
WD40_RFWD3
Beta-prop_HPS5
TPR_16
ANAPC3
TPR_14
Beta-prop_WDR35_TULP_N
TPR_6
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Barstar
Motif
Other DBs
NCBI-GeneID:
102531970
NCBI-ProteinID:
XP_006196902
UniProt:
A0A6I9HV39
LinkDB
All DBs
Position
13
AA seq
678 aa
AA seq
DB search
MAKVNITRDLIRRQIKERGALSFERRYHVTDPFIRRLGLEAELQGHSGCVNCLEWNEKGD
LLASGSDDQHTIVWDPLHHKKLLSMHTGHTANIFSVKFLPHAGDRILITGAADSKVHVHD
LTVKETIHMFGDHTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRENSKHSEVLIDLTEY
CGQLVEAKCLTVNPQDNNCLAVGASGPFVRLYDIRMIHNHRYEQHGLQWASPCEPAAPSP
HCHALFFLAGHLPVKLPDYNNRLRVLVATYVTFSPNGTELLVNMGGEQVYLFDLTYKQRP
YTFLLPRKCHSSGEVQNGKMSTNGVSNGVSNGLHLHSNGFRLPESRAHVSPQVELPPYLE
RVKQQANEAFACQQWTQAIQLYSKAVQRAPHNAMLYGNRAAAYMKRKWDGDHYDALRDCL
KAISLNPCHLKAHFRLARCLFELKYVAEALECLDDFKGKFPEQAHSSACDALGRDITAAL
FSKNDGEEKKGAGGGGGGGGPVRLRSTSRKDSISEDEMVLRERSYDYQFRYCGHCNTTTD
IKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPHPSYCFLATSG
IDPVVRLWNPRPESEDLTGRVVEDMEGASQANQRRMNADPLEVMLLNMGYRITGLSSGGA
GASDDEDSSEGQVQCRPS
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagtcaacataactagagacctcatccgtaggcagatcaaggagcggggtgcc
ctgagctttgagcggcgctaccatgtcactgacccctttatcagacggctgggcctggaa
gcagagctgcagggtcactcaggatgtgtcaactgtctggagtggaatgagaaaggagac
ttgctggcctctggttctgatgaccagcacacgattgtgtgggacccgctgcaccacaag
aagctgctctccatgcacacaggacacactgcaaatatcttttctgtcaagttccttcct
cacgctggggaccgaatcttgatcacaggggcagctgactccaaggtgcatgtccacgac
ctgacagtaaaggagacgatccacatgtttggagaccacaccaaccgggtgaaacgcatc
gccacggcacccatgtggcccaacacgttctggagtgccgctgaggatgggctcatccgc
cagtatgaccttcgggagaacagcaaacactcagaggtgctgattgacctgacggagtac
tgtggccagctggtggaggccaagtgcctcactgtcaacccccaggacaacaactgcctg
gcagtaggggccagcgggcccttcgtgaggctctacgacattcgcatgatccataaccac
aggtatgaacagcatggcctccagtgggcaagtccctgcgagcctgcagccccttcccct
cactgtcatgccctcttctttttagcaggtcacctgccagtgaagctgcctgactacaac
aaccgtctgagagtgctggttgccacttatgtaaccttcagccccaatggcacagagctg
ctggtcaacatgggaggagagcaggtctatttgtttgacctgacttacaagcagcggcca
tacaccttcctcttgcctagaaaatgccactcctcaggggaagttcagaatggcaagatg
tctaccaatggtgtgtccaacggcgtgtccaatggcctgcaccttcacagcaatggcttc
cggctcccggagagtagggcacatgtcagcccccaggtagagctgcccccatacctggag
cgcgtgaaacagcaagccaatgaggcttttgcctgccagcagtggacccaggccattcag
ctttacagcaaggccgtgcagagggctcctcacaacgccatgctctacgggaaccgagct
gctgcctacatgaagcgcaagtgggatggtgaccactatgatgctctgagggactgcctc
aaggccatctccctaaatccatgccacctgaaggcacacttccgcctggcccgatgcctc
tttgagctcaagtacgtggctgaggccctggagtgcttggatgatttcaaagggaagttc
ccagagcaggcccacagcagcgcttgtgatgcattgggacgtgacatcacggctgccctc
ttctccaaaaatgatggtgaggagaagaagggagctggtggtggtggcggtggcggcggc
cccgtccgcctccgcagcacgagccgcaaggactccatctcagaggatgagatggtgctg
cgggagcgaagctacgactaccagtttcgctactgtggccactgcaacaccaccacggat
atcaaggaggccaacttctttggcagcaacgctcagtacatcgtcagtggctctgacgat
ggctccttcttcatctgggaaaaggagaccaccaacctggtccgcgtgctccagggggac
gagtccatcgtcaactgcctgcagccacaccccagctactgcttcctggccaccagcggc
attgaccctgttgtgcggctatggaacccccggccagagagtgaagacctcacaggccgc
gttgtggaggacatggaaggcgcgtcccaggccaaccagcggcgcatgaacgcggaccca
ctggaggtgatgctgctcaacatgggctaccggatcacgggcctgagcagtgggggcgcc
ggggcctcggacgatgaggacagctccgagggccaggtgcagtgccggcccagctag
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