Vicugna pacos (alpaca): 102532024
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Entry
102532024 CDS
T08098
Symbol
TAF4B
Name
(RefSeq) transcription initiation factor TFIID subunit 4B
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03022
Basal transcription factors
vpc05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102532024 (TAF4B)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
102532024 (TAF4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpc03021
]
102532024 (TAF4B)
03036 Chromosome and associated proteins [BR:
vpc03036
]
102532024 (TAF4B)
Transcription machinery [BR:
vpc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102532024 (TAF4B)
Coactivators
SAGA/TFTC/STAGA complex
102532024 (TAF4B)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
102532024 (TAF4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
102532024
NCBI-ProteinID:
XP_006205150
UniProt:
A0A6I9I6N9
LinkDB
All DBs
Position
24
AA seq
863 aa
AA seq
DB search
MPAGLTEPAGAAPTAGVGASGTVTMAPAAALPVRVESTPVALGAVTKAPVSVCVESVASQ
PLRSPVGTLVTKVAPTNALPKLSSGPRLPAPQIVAVKAPNTTTIQLPANLQLPPGTVLIK
SNSGQLMLVSPQQAVTRTETTSNITSRPAVPTNTQTVKICTVPNSSSQLIKKVAVAPVKP
LAPIGTTVVTTVPKPSSVQSVAVPTNVVTVTPVKPLNTVTTLKPSSLGAPSIPSNEPHPK
AENSAAAQTNLSPTMLENVKKCKNFLAMLIKLACSGSQSPEMGQNVKKLVEQLLDAKIEA
EEFTRQLYVELKSSPQPHLVPFLKKSVIALRQLLPSSQSFIQQCIQQTSGEVVIAACTTT
VTASPVVTTAVASVQPEKPAIGSEAATPGTVSVQTLNPLAGPGGAKTGVVTLHSVGPAAV
PAGTTAGTVVLQAPKPLVTSLPNTVTAVSLQPEKPVVSGAAVTLALPSVTFGETSAAAIC
LPSVKPVVTSAGTTPDKPVIGTPVQIKLAQPGPILAQPAGVPQAVKVKQLVVQQPSGGLA
KQVTTLSHSSALTIQKSGQKKVIVSPAVPTSQFPQASILKQITLPGNKILSLQSSMQKNK
VKENGSTSFRDEDDINDVTAMAGVSLSEENACILATNSELVGSLVQSCKDEPFLFIGALQ
KRILDIGKKHDITELNSDAVNLISHATQERLRGLLEKLTTIAQHRMTTYKASENYILSND
TRSQLKFLEKLDQLEKQRKDLEEREMLLKAAKSRSNKEDPEQLRLKQKAKELQQLELAQI
QHRDANLTALAAIGPRKKRPLESGSGSEGLKDNLFASGASSLTATKQLLRPRITRVCLRD
LIFCMEQEREMKYSRALYLALLK
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgggcctcacagaaccggccggcgccgctcccaccgccggtgtgggcgcctcc
gggaccgtgaccatggcccccgccgcagctctgcccgtccgggtggagagcactccggta
gccttgggcgccgtgactaaggctcctgtcagtgtctgcgtggagtccgtggcgtcccag
cccctgcggtcccccgtggggaccctggtgaccaaagtggctcctaccaatgctcttcct
aaactcagcagcggccctcggctgccagctcctcagattgtcgctgtgaaagcccccaac
accacaacaatccagctgcctgctaatttgcagcttcctccaggaacagttttgatcaaa
agtaatagtggtcagttgatgttggtatctcctcagcaagcggtaacaagaaccgagacc
acaagtaacataacttcaaggccagctgtaccaacgaacactcaaacggtcaaaatctgc
acagtgccgaattctagttcacaattaatcaagaaggtggcagtggcacctgttaaaccg
ttggcaccaataggaactactgtggtaaccactgttccaaagccttcctcggtacaatct
gtggctgtgccaaccaacgttgtcacagttacgcctgtaaagcccttgaatactgtaact
accttgaagccttcaagtttgggagcaccatccatcccctcaaatgagccccatcccaaa
gcagagaactcagctgctgctcagactaacctttctccgacgatgctagaaaatgtgaag
aaatgtaagaactttctggcaatgttaataaaactagcatgtagtggatcgcagtccccg
gaaatggggcagaacgtgaagaagttggtggaacaacttttggatgcaaaaattgaagca
gaagaatttactagacaactgtatgttgaactcaagtcttcacctcagcctcaccttgtt
ccttttctcaagaaaagtgtgattgccttacgacaactcttgcctagctcccagagcttt
attcagcagtgcattcagcagacttctggagaggtggtcattgctgcttgtaccacgaca
gtaacagcttctcctgtggtgacaacagcagttgcctcagtccagcctgaaaagcccgcc
attggttctgaagcagcaacgcccggaactgtgtcagtgcagactctgaatccacttgct
ggtccagggggagcaaaaactggggttgtgacactgcactctgtgggtccagctgctgtg
ccagcaggaacaacagctggaactgttgtgcttcaggctccaaagccgcttgtgacgtct
ctgccaaacacggtgacagcagtctcacttcagcctgaaaagccggttgtctctggggca
gcagtgaccctggcccttccctcggtaacttttggagaaacttcagcagccgctatttgt
cttccgtccgtgaaacctgttgttacttctgctgggaccacacctgacaagccggtcatt
ggcactccagtccaaatcaaacttgcacagccgggccccatccttgcacaaccagctggt
gttccacaggcagttaaagtcaaacaactagtagtccagcagccttcaggaggccttgcg
aaacaagtgaccacactttcccattcctcagcgttgaccattcagaaatctggacagaag
aaggtgatagtgagccctgcagtacctaccagtcagtttcctcaagcttccattctaaag
caaattacgctgccaggaaataaaattctatcacttcaatcatctatgcagaaaaataaa
gtaaaagagaatggatcaacatccttcagagatgaggatgacatcaatgatgtgactgcc
atggcaggggtcagcctcagtgaagaaaatgcctgcatcttagcaacaaactctgaactg
gttggctcactcgttcagtcatgtaaagatgaaccgttccttttcattggagctctacaa
aaaagaattttagacatcggtaaaaagcatgacattacggaacttaactctgatgctgtg
aacttgatctcccatgcaacacaggagcgattacgaggccttctagaaaaactgactaca
attgctcagcatcgaatgacaacttacaaggcaagtgaaaattacatcctgtctaatgac
actagatcacagctcaaatttcttgaaaagctagatcaactggagaagcagagaaaggat
ttagaagaaagagaaatgttacttaaggcagccaagagtcgttccaataaagaagatcca
gaacagctgagattaaagcagaaagccaaagagttacaacagttggaactcgcacagata
cagcatagagatgctaatctcacagctcttgcagctattggaccaagaaagaagagacca
ctagaatctgggtctggaagtgagggcttaaaagacaacctttttgcttctggggcatct
agcctgacagccaccaaacaattgcttcgtccaagaatcacgagagtctgcctcagggac
ctgatcttctgtatggagcaggagagggagatgaagtactcccgagctctgtacttggcc
cttctgaagtga
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