Vicugna pacos (alpaca): 102532035
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Entry
102532035 CDS
T08098
Symbol
CSPG4
Name
(RefSeq) LOW QUALITY PROTEIN: chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
vpc00535
]
102532035 (CSPG4)
04091 Lectins [BR:
vpc04091
]
102532035 (CSPG4)
Proteoglycans [BR:
vpc00535
]
Cell surface proteoglycans
Others
102532035 (CSPG4)
Lectins [BR:
vpc04091
]
C-Type lectins
Others
102532035 (CSPG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
DUF3377
Motif
Other DBs
NCBI-GeneID:
102532035
NCBI-ProteinID:
XP_015098693
UniProt:
A0A6J0AS15
LinkDB
All DBs
Position
27
AA seq
2307 aa
AA seq
DB search
RSGPGSAFAVLAGPASTASFFGENHLEVPVATALTDIDLQLEFSTSQPEALLLLAAGPAD
HLLLQLYSGRLQVRLILGKEEVRLQTPAETLLSDSVPHTVGLTVSDSWALLSVDGLLNAS
APVQGASLEVPYGLSLGGTGSLGLPYLGGASRPLRGCLYTAVLNGRSLLRPLTPDVPEGC
AEEFSAGDDVALGFSGPQSLAAFPAWGTQDEGTLEFTLTTRSQQAPLAFQAGGRHGDFIY
VDIFDGHLRAVVEKGQGTILLHNSVPVADGQPHEVSVHMDAHRLEISVDQYPTRTSNRGV
LSHLEPRGSLLLGGLDAEASRHLQEHRLGLAVNISLLGCLEDLSVNGQRLGLREALLTRN
MAAGCRLEEDEYEEDAYGPYEALSTLAPEAWPAMQLPEPCVPEPGLPPVFANFTQLLTIS
PLVVAEGGTAWLEWRHMQPTLDLSEAELRKSQVLFSVTRGARHGELELDIPGAQARKMFT
LLDVVNRKARFVHDGSEDTSDQLVLEVSVTARGPMPSCLRRGQTYILPIQINPVNDPPRV
IFPHGSLMVILEHTQKPLGPEVFHAYDPDSACEGLTFQLLGVPTSLPVERRDQPGEPATE
FSCRELEAGNLVYIHRSGPAQDLTFRVSDGLQASPPATLKVVAIRPAIQVRHNTGLHLAQ
GSTAPVLPANLSVETNAVGQDVSVLFRVTGALQFGELQKQGAGGAEGAEWRATQAFHQRD
VEQGRVRYLSTDPQHRAEDTVENVALEVQVGQETLSNLSFPVTVQRATVWLLRLEPLHTQ
NTRQEALTTAHLEAAMEDAGPNPTTFHYELVQAPRKGNLRLQGTRLSDGQGFTQDDLQAG
RVTYGATARASEAVEDVFRFRVTAPPHFSPLYTFPIHISGDPDAPVLTNVLLSVPEGGEG
VLSADHLFVKSLNSASYLYEVMERPRHGRLAWRGAQDKTTMVTSFTNEDLLHGRLVYQHD
GSETTEDDIPFVAARQGEGSGGLAGEEVRGVFRVAIQPVNNRAPVQTVSRVFHVARGGQR
LLTTDDVAFSDADSGFADAQLVLTRKDLLFGSIVAVDEPTRPIYRFTQEDLRKRRVLFVH
SGADRGWIQLQVSDGQHQATALLEVQASEPYLHVANGSSLVVPQGGQGTIDTAVLHLDTN
LDIRSGDEVHYRVTDGPRWGQLLRAGQPATAFSQQDLLDGAILYSHNGSLSPRDTLAFSV
EAGPVHTDATLQVTIALEGPLAPLHLVQHKKIYVFQGEAAEIRRDQLEAAQEAVPPADIV
FSVKTPPSAGYLVMLSHGATAAKPPSLDPVHSFSQEAVDAGRVLYLHSRPEAWSDAFSLD
VSSGLGAPLEGIRMELEVLPTTIPLKAENFSVPEGGTRTLAPPLLRITGPYFPTLPGLNL
LVLEPPRHGTLRREEGPQDRTLSTFSWREVEQQLIHYVHDGSETLADSFVLVANASEMDR
QSYPVTFSVTILPVNDQPPVLTTNTGLQMWEGATVPIPAEAIRATDSDSGPEDLVYTLEQ
PSNGQVVLRTAPGTKVYSFTQAQLDSGLVLFSHRGVLDGGFRFSLSDGEHTSPGHFFRVT
AQKQLLLSLEGSRTLTICPGSTQPLSSQSLRASSSAGTDPHHLLYHVVRGPQLGRLFHTQ
RGSAGEALVNFTQAEIYAGNVLYEHEMPPEPFWEAHDTLELRLSSPPAPDLAATLDVSVS
FEAACPQRPSRLWKNKGLWVSEGQRAEITTAALDASNLLASVPSPQRAEHDVLFQITQFP
TRGQLLVSEEPLHTGRPHFLQSELAAGQLVYAHGGGGTQQDGFRFRAHLQGPAGASVAGP
QTSAAFTITVRDVNERPPQPQASVPLRLTRGSRSPISRAQLSVVDPDSAPGEIEYEVQRA
PHNGFLSLAGASLGPGTRFTQADVDAGRLAFVANGSSVAGFFQLSVSDGASPPLPVSLAV
DVLPSAIEVQLRAPLEVPQALGRSSLSRQQLQVVSDREEPDAAYHLIQGPQYGHLLVGGQ
PATAFSQLQVDQGEVVFAFTNFSSSHDQFSILALARGANTSATVNITVRALLHMWTGGPW
PQGATLRLDPTVLDAGELANRTGSVPRFRLLAGPQHGRLVRVPRARTEPWGGQLVEQFTQ
QDLEDGRLGLEVGRPEGVSPGPAGDRLTLELRARGVPPAVASLDFATEPYSAARPYRVAL
LSLPEAAWTEAGQPEGSTSTGQPDPVASSPAPTTARGSFLGFLEANMFSVIIPVCLVLLL
LALILPLLFYLRKRNKTGKHDVQVLTAKPRNGLAGDTETFRKVDPGQAIPLTAVPGQAAP
PGAQPDPELLQFCRTSNPALKNGQYWV
NT seq
6924 nt
NT seq
+upstream
nt +downstream
nt
cgctcgggccctggctcggccttcgctgtgttggctggaccagcttccacagcctctttc
ttcggagagaaccacctggaggtgcctgtggccacggctctgaccgacatagacctacag
ctggagttttccacgtcccagcccgaagccctgctcctcctggcggcaggcccggctgac
cacctcctcctgcagctctactctggacgcctgcaggtcagactgatcctgggcaaggag
gaggtgaggctgcagaccccggcagagacactgctgagcgactccgtcccccacaccgtg
gggctgactgtgtcagacagctgggctttgctgtcagtcgacgggctcctgaacgcctca
gcccctgtccagggagccagcctggaggtcccctatggactctcccttgggggcactggg
agccttggcctgccctacctggggggtgccagccgacccctccggggttgcctctacaca
gccgtcctcaatggtcgcagccttctccggccactgaccccggacgtgcccgagggctgt
gctgaggaattttctgctggtgacgatgtggccctgggcttctctgggccccagtcgctg
gctgccttcccggcctggggcactcaggatgaaggcaccctggagtttacactcaccaca
cggagccagcaggctcccctggccttccaggcagggggccggcacggggacttcatctac
gtggacatatttgacggccacctgcgggctgtggtggagaagggccagggcacgatactg
ctccacaacagtgtgcctgtggctgatgggcagccccacgaggtcagtgtccacatggat
gctcaccggctggaaatctccgtggaccagtacccaacacgcacttccaaccgtggggtc
ctcagccacctggagccacgtggcagtctcctcctcggagggctggatgcagaggcctct
cgccatctccaggaacaccgcctaggcctggctgtcaacatctccctgctgggctgcttg
gaggatctcagcgtcaatggccagaggctggggctccgggaagccttgctgactcgcaac
atggcggccggctgccgtcttgaggaggacgagtatgaggaggacgcctatggcccatac
gaagctctctccaccctggcccctgaggcttggccggccatgcagctgcctgagccctgc
gtgcctgagccggggctgccccctgtctttgccaatttcactcaactgctgaccatcagc
cctctggtggtggccgagggcggcacggcctggctggagtggcggcatatgcagcccaca
ctggacctgagcgaggccgagctgcgcaaatcccaagtattgttcagcgtgacccgtggc
gcccggcatggcgagctggagctggacatcccgggtgcccaagcgcggaaaatgttcacc
ctcctggacgtggtgaaccgcaaggcccgcttcgtccacgatggctccgaggacacctcc
gaccagctagtgctggaggtgtcagtgacagctcgggggcccatgccctcctgccttcgg
aggggccagacttacatcctgcccattcagataaaccctgtcaacgacccaccccgcgtc
atcttcccacacggcagcctcatggtgatcctggaacacactcagaagcctctggggccc
gaggtcttccacgcctacgatccagactctgcctgcgagggcctcaccttccagctcctt
ggtgtccccaccagcctccccgtggagcgccgagaccagcctggggagccagccaccgag
ttctcctgccgggagctggaggcaggcaacctagtctacatccaccgtagtgggcccgcc
caggacctgacgttccgggtcagcgatgggctccaagccagcccccctgccacgctgaag
gtggtggccatccggccagccattcaggtccgccacaacacaggcctgcacctggcccag
ggctccaccgcacctgtgctgcccgccaacctgtcagtggagacgaatgccgtggggcag
gatgtgagcgtgctgttccgagtcactggggccctgcaatttggggagctgcagaaacag
ggggcaggtggggcggagggtgccgagtggcgggccacacaggcgttccatcaacgggac
gtggagcagggccgcgtgaggtacctgagcaccgacccgcagcaccgtgccgaggacacc
gtggagaatgtagccctggaggtgcaggtgggccaggagaccctgagcaacctgtccttc
ccagtgactgtccagagagccacagtgtggctgctgcggctggagcctctgcacacccag
aacacccggcaggaggccctcaccacagcccacctggaagctgccatggaggatgcgggc
ccaaaccccaccaccttccactatgagctagtgcaggcccccaggaagggtaatcttcgg
ctccagggcacacgactgtcagacggtcagggcttcacccaggatgacctgcaggccggc
cgagtgacctacggggccacagcgcgagcctcagaggcagtggaggacgtcttccgattc
cgggtcacggccccgccacacttctccccgctctacaccttccccatccacatcagcggt
gatcccgacgcccctgtcctcaccaacgtcctcctgtcggtgcccgagggcggcgagggc
gtcctctctgctgaccacctcttcgtcaagagtctcaacagtgccagctacctctatgag
gtcatggagcggccccgccatggcaggttggcatggcgtggggcgcaggacaagaccacc
atggtgacatccttcaccaacgaggacctgctgcatggccggctggtctaccagcacgac
ggctccgagaccacagaagatgacatcccgtttgtggctgcccgccagggcgagggcagc
gggggcctggccggggaggaggtacgtggagtcttccgcgtggccatccaacccgtgaac
aaccgcgcccctgtgcagaccgtcagccgcgtcttccacgtggcccggggtgggcagcgg
ctgctgactacagacgacgtggccttcagcgacgccgactccggctttgctgacgctcag
ctggtactgacccgcaaggacctcctcttcggcagtatcgtggctgtggatgagcccacg
aggcccatctatcgcttcacccaggaggacctcaggaagaggcgagtcttgttcgtgcac
tcgggggccgaccgtggctggatccagctgcaggtgtctgacgggcagcaccaggccacc
gcgctgctcgaagtgcaggcctcggagccctacctccatgtggccaatggctccagcctc
gtggtccctcaaggcggccagggcaccatcgacacagctgtgctccacctggacaccaac
ctagatatccgcagtggggatgaggttcactaccgtgtcactgacggcccacgctggggg
cagctgctccgggccggccagccagccacagccttctcccagcaggacctgctggatggg
gccattctctacagccacaacggcagcctcagcccccgtgataccctggccttctctgtg
gaggcagggcctgtgcacacggatgccaccctccaggtgaccattgccctcgaggggcca
ctggccccactgcacctggtccagcacaagaagatctatgtcttccagggggaagcagct
gagatcagaagagaccagctggaggcagcccaagaggcagtgccaccagcggacattgtg
ttctcagtgaagaccccaccaagcgctggctacctggtgatgctgtcccacggcgccacg
gctgccaagccgccgagcctggaccccgtgcacagcttctcccaggaggcagtggatgca
ggcagggtcctgtacctgcactcccgccctgaggcctggagtgatgccttctccctggat
gtgtcctcgggcctgggtgctccccttgagggcatccgcatggagctggaggtgctgccc
accaccatcccactgaaggcagagaacttcagcgtccctgagggcggcacccgcaccctg
gcccctccactgctccgcatcaccgggccctacttccccacactgccaggcctcaacctg
ctagtgctggagccaccccggcacgggaccctgcggagagaagaaggacctcaagacagg
accctcagcaccttctcctggagagaggtggaacagcagttgatccactatgtgcacgac
gggagcgagacgctggcagacagcttcgttctagtagccaacgcctcagagatggaccgc
cagagctatcccgtgaccttctccgtcaccatcctgcctgtcaacgaccaacctcctgtc
cttaccacaaacacaggcctgcagatgtgggagggggccactgtgcccatccctgcggag
gccattagggccacagacagcgactcaggacccgaggacctggtctacaccctcgagcag
cccagcaacggacaggtagtgctgcggacggcgccaggcaccaaggtctacagcttcacc
caggcccagctagacagtgggctcgtgctgttctcacacagaggagtcctggacggaggc
ttccgcttcagcctgtctgatggcgagcacacttcccctggacacttcttccgggtgacg
gcccagaagcagctgctcctctcgctggagggcagccggacgctgaccatctgcccaggt
tccacccagccactcagcagccagagcctgagagccagttccagtgcaggcaccgacccc
caccacctgctctaccatgtggttcggggcccccagcttggccggctgttccacacccag
cggggcagcgccggggaggccctggtgaacttcactcaggcagagatctatgctgggaat
gttctgtatgagcacgagatgccccctgagcccttctgggaggcccacgacaccctggag
ctccggctgtcctcaccccctgcgcccgacctggccgccaccctggatgtgtctgtgtct
ttcgaggctgcctgtccccagcgccccagccgcctctggaagaacaaaggtctctgggtc
tctgaaggtcagcgggctgagatcaccacagctgccctggatgcctccaacctcctggcc
agcgttccgtcgccccagcgtgcagagcacgacgtgctcttccagatcacgcagttcccc
acgcggggccagctattggtgtccgaggagcctctgcacaccgggcggccccacttcctg
cagtccgagctggccgcagggcagctggtgtacgcccacggcggcgggggcacccagcag
gatggctttcgcttccgtgcccacctccagggaccagcaggggcctcagtggcgggaccc
caaacctcagcggccttcaccatcacggtgcgggacgtgaatgagcggccacctcagcca
caggcctccgtcccgctccggctcacccggggctcccgcagccccatctcccgggcccag
ttgagcgtggtggacccagactcggctcccggggagatcgagtacgaggtgcagcgggca
ccccacaacggcttcctgagcctggcgggggccagcctgggtcctgggacccgcttcact
caggccgacgtggacgcagggcggctggcgttcgtggccaacggcagcagtgtggcaggc
ttcttccagctgagcgtgtctgatggggccagcccgcccctgcccgtgtccctggccgtg
gacgtcttgccctcggccatcgaggtgcagctgcgggcacccttagaggtgccccaagcc
ctagggcgctcctccctgagccggcagcagctccaagtggtttctgatcgggaagagcca
gatgcagcctaccacctcatccaggggccccagtacgggcatctcctggtgggcgggcag
cccgccacagccttcagccagctccaggtggaccagggcgaagtggtctttgctttcacc
aacttctcctcctctcatgaccaattcagcattctggcactggccaggggtgccaacaca
tccgccacagtgaacatcaccgtgagggctctgctgcacatgtggacgggtgggccatgg
ccccagggtgccaccttgcgcctggaccccaccgtcttagatgcaggggagctggccaac
cgcacaggcagtgtgccgcgtttccggcttctggcgggaccccagcacggtcgcttggtc
cgcgtgccccgggccaggacagagccctggggaggccagctagtggagcagttcacccag
caggaccttgaggatgggaggctggggctggaggtgggcaggccagagggtgtgtcgccc
ggccctgcaggcgacaggctcactctggagctgcgggcaaggggtgtccctcctgccgtg
gcctcactggactttgccactgagccttacagcgcggcccggccctacagagtggccctg
ctcagtctgcctgaggcagcttggacagaggcaggacagccagagggcagcacctccaca
ggccagccagacccggtggcctccagccctgcgcccaccacggcccggggcagcttcctg
ggcttcctcgaggctaacatgttcagcgtcatcatccccgtgtgcctggtcctcctgctc
ctggcgctcatcttgcctctgctcttctacctccgcaaacgcaacaagacaggcaaacac
gacgtccaggtactgacggccaagcctcgcaacggcctggccggtgacaccgagaccttt
cgcaaagtggacccaggccaggccatcccgctcacagccgtgcccggccaggcagcccct
ccgggggcccagcctgatccagagctgctacagttctgccggacatccaaccctgccctc
aagaacggccagtactgggtgtga
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integrated database retrieval system
