Vicugna pacos (alpaca): 102532175
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Entry
102532175 CDS
T08098
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpc03000
]
102532175 (CTCF)
03036 Chromosome and associated proteins [BR:
vpc03036
]
102532175 (CTCF)
Transcription factors [BR:
vpc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
102532175 (CTCF)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102532175 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
102532175
NCBI-ProteinID:
XP_031536577
UniProt:
A0A6J3ARW6
LinkDB
All DBs
Position
9
AA seq
727 aa
AA seq
DB search
MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDACHLPQNQTDGGEVVQDVNSSVQM
VMMEQLDPTLLQMKTEVMEGAVAPEAEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKEGLTESEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELPPQEDPSWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENGGETKKSKRGRKR
KMRSKKEDSSDSENAEPDLDDNEDEEEPAVEIEPEPEPQPVTPAPPPAKKRRGRPPGRTN
QPKQTQPTAIIQVEDQNTGAIENIIVEVKKEPDAEPAEGEEEEAQPAATDAPNGDLTPEM
ILSMMDR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaggcggttgaagccattgtggaagagtctgaaactttcattaaaggaaag
gagagaaagacttaccagagacgccgggaagggggccaggaagaggacgcttgccaccta
ccccagaaccagactgatgggggtgaggtggtccaggatgtcaatagcagtgtacagatg
gtaatgatggaacaactggatcctacccttcttcagatgaagactgaagtaatggagggt
gcagtcgctccagaagcagaggctgctgtggacgatacccagattataaccttgcaggtt
gtaaatatggaggaacagcctataaacataggagagctccagcttgtgcaagtacccgtt
cccgtgactgtacccgttgctaccacttcagtagaagaacttcagggggcttatgagaat
gaagtgtctaaagagggccttacagaaagtgaacccatgatatgtcacaccttacctttg
cctgaagggtttcaagtggtgaaagtaggggccaatggagaggtggagacgctagaacaa
ggcgaacttccgcctcaggaagatcctagttggcaaaaagacccagactatcagccacca
gccaaaaaaacaaagaaaaccaaaaagagcaaactgcgttacacagaggagggcaaagat
gtggatgtgtctgtctacgattttgaggaagagcagcaggagggtctgctgtcggaggtt
aatgcagagaaagtggttggtaacatgaagcctccaaaaccaacaaaaattaaaaagaaa
ggtgtaaagaagacattccagtgtgagctttgcagttatacgtgtccacggcgttcaaat
ttggatcgtcacatgaaaagtcacactgatgagagaccacacaagtgccatctctgtggc
agggctttcagaacagtcacccttctaaggaatcaccttaacacacacacaggtactcgt
cctcacaagtgcccagactgtgacatggcctttgtgactagcggagaattggtgcggcat
cgtcgttataaacacacccatgagaagccatttaagtgttctatgtgcgattacgccagt
gtagaagtcagcaaattaaaacgtcacattcgctctcacactggagagcgtcctttccag
tgcagcttgtgcagttatgccagcagggacacatacaagctgaaaaggcacatgagaacc
cattcaggggagaaaccttatgaatgttatatttgtcatgcacggtttacccaaagtggt
accatgaagatgcacattttacagaagcacacagaaaatgtggccaaatttcactgtccc
cactgtgacactgtcatagcccgaaaaagtgatttgggtgtccacttgcgaaagcagcat
tcctatattgagcagggcaagaagtgccgatactgcgatgctgtgtttcatgagcgctat
gccctcatccagcaccagaagtcacacaagaacgagaagcgctttaaatgtgatcagtgt
gattatgcttgcagacaggagaggcacatgatcatgcacaagcgcacccacaccggcgag
aagccttatgcctgcagccactgcgacaagaccttccgccagaaacagctcctcgacatg
cacttcaaacgctatcacgaccccaactttgtccctgcggccttcgtctgttctaagtgt
gggaaaacatttacgcgccggaataccatggcaagacatgctgataattgtgctggtcca
gatggtgtagaaggggaaaatggaggagaaacgaagaagagtaaacgtggaagaaaaaga
aagatgcgctctaaaaaggaggactcttccgacagtgaaaatgctgagccagacctggat
gacaacgaggatgaggaggagcctgctgtggaaattgaacccgagccagagcctcagcct
gtgaccccagccccaccacccgccaagaagcggagaggacgcccccctggcagaaccaac
cagcccaaacagacccagccaacagccatcattcaggttgaagaccagaatacaggtgca
attgagaacattatagttgaagtcaaaaaagagccagacgcagagcccgcagagggggag
gaagaggaggctcagcctgctgccacagatgcccccaacggagacctcacacccgagatg
atcctcagtatgatggaccggtga
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integrated database retrieval system
