Vicugna pacos (alpaca): 102532199
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Entry
102532199 CDS
T08098
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03022
Basal transcription factors
vpc03420
Nucleotide excision repair
vpc05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102532199 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
102532199 (GTF2H1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
102532199 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpc03021
]
102532199 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
vpc03400
]
102532199 (GTF2H1)
Transcription machinery [BR:
vpc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
102532199 (GTF2H1)
DNA repair and recombination proteins [BR:
vpc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
102532199 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
102532199
NCBI-ProteinID:
XP_006209370
UniProt:
A0A6I9ID49
LinkDB
All DBs
Position
10
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLNVNATESSSTTNHKQDVGISAAFLADVRPQTDG
CNGLRYNLTADIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK
DLFAECAKIDEKGLKTMVSLGVKNPLLDLTALEDKSLDEGYGISSVPSTSNSKSIRENSN
AAIIKRFNHHSAMVLAAGLRKQEAQSEQNGEPSGIDGNSGDGDCFQPAVKRAKLQESIEY
EDLGKNNSIKTIALNLKKSDRYYHGPTPIQSLQYATSQDILNSFQSIRQEMEAYTPKLTQ
VLSSSAASSTITALSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP
VNTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHTWQ
SRRLMKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttcatctgaagaagttttgctgattgtaaagaaggtgcgacaaaagaagcag
gatggagctctataccttatggcagaaagaattgcttgggcacctgaaggcaaagataga
tttaccatcagccatatgtatgcggatattaaatgccagaaaatcagtccggaaggaaaa
gctaaaattcagcttcagctggttctgcatgcaggggacacaactaacttccatttttcc
aatgaaagcacagcagtgaaagagcgagatgcagtgaaagaccttcttcaacagctgctg
cccaaattcaagaggaaagcaaataaagaactagaagagaaaaacagaatgctgcaagaa
gatcctgttttgtttcagctttataaagaccttgttgtgagtcaggtgatcagtgccgag
gaattctgggccaatcgtttaaatgtgaatgcaacagagagttcttctacaaccaatcat
aagcaggatgttggcatttctgcagcatttctggctgatgtccggccccaaacagatgga
tgtaatggtttgagatacaatttaaccgctgatataattgagtccatatttaggacctat
ccagcagtaaaaatgaaatatgcagaaaatgttccccacaacatgacagaaaaggaattc
tggacacgtttctttcagtcccattattttcacagggaccggctgaatacagggtcaaag
gacctctttgcagaatgtgccaaaatagatgaaaaagggttaaaaacaatggtatcatta
ggagtgaaaaacccactacttgatttgacagctttggaagataaatcattagatgagggc
tatggcatttcctctgtgccatctacttctaattctaagtccataagagagaatagtaat
gctgccatcatcaagagatttaaccatcacagtgccatggtcctggcagcaggtctcagg
aaacaagaagcacaaagtgaacaaaatggtgagcccagtggcattgatggaaattctgga
gatggagactgctttcagccagcagtcaaaagggcgaagttgcaagagtccattgaatat
gaagacttgggaaaaaataattccataaaaacaattgcactaaacctcaagaagtcagat
aggtattatcatggtccaactccaatccagtcattacagtatgcaacaagtcaggacatt
cttaattcttttcaaagtattagacaagaaatggaagcttatacacccaaattaactcag
gttctctcaagtagtgctgccagtagtaccatcacagcactgtcacctggaggagcactt
atgcagggagggacacagcaagccataaaccagatggtgccaaatgatattcagtctgaa
ttgaaacacctgtatgtggctgttggggaacttctacggcatttctggtcctgttttcct
gttaatacgccattcctagaagaaaaggtagtgaaaatgaaaagtaatttggaacgattc
caagttacaaagctctgcccattccaagaaaaaattcggagacagtatttaagcacaaat
ttggtaagtcacatagaggagatgctccagacagcctacaacaagctccacacgtggcag
tcacggcgtctgatgaagaaaacgtga
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