Vicugna pacos (alpaca): 102532214
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Entry
102532214 CDS
T08098
Symbol
CLSTN1
Name
(RefSeq) LOW QUALITY PROTEIN: calsyntenin-1
KO
K22659
calsyntenin 1
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vpc04515
]
102532214 (CLSTN1)
Cell adhesion molecules [BR:
vpc04515
]
Cadherins
Cadherin related
102532214 (CLSTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
FAM176
EphA2_TM
Glyco_hydro_16
V_ATPase_I
SID-1_RNA_chan
Cadherin_C_2
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
102532214
NCBI-ProteinID:
XP_031539444
LinkDB
All DBs
Position
13
AA seq
1026 aa
AA seq
DB search
MHRSVGDPDDWGPLGFSASELATRTLQQFVSDSGTGSRRLLPVGFCSRGGSKSVALGSRA
GCRPGRVLAVGVNKHKPWLEPTYHGLVTESDSTVLLDPPLIALDKDAPLRFAESFEVTVT
KEGEICGFKIHGQNVPFDAVVVDKSTGEGIIRSKEKLDCELQKDYTFSIQAYDCGKGPDG
ASVKKSHKATVHIQVNDVNEYAPVFKEKSYKATVVEGKQYDSILRVEALDADCSPQFSQI
CSYEIVTPDVPFTVDKDGYIKNTEKLSYGKEHQYKLTVTAYDCGKKRATQDVLVKISIKP
TCAPGWRGWNNRVEYEPGTGALALFPNVHLETCDESVASVQATVELETSHIGKGCDRDTY
SEKSLHRLCGAASGTAELLPSPSGSSNWTVGLPTDNGHDSDQVFEFNGTQAVRIPGGVVS
VNPKEPFTISVWMRHGPFGRKKETVLCSSDKTDMNRHHYSLYVHGCRLVFLLRQDPSEEK
KYKPAEFHWKLNQVCDEEWHHYVLNVEIPSVTLYVDGVSHEPFSVTEDYPLHPAKIETQL
VVGACWQEYSGVENDNETEPVPVASAGGDLHMTQFFRGNLAGLTIRSGKLADKKVIDCLY
TCKEGLDLHVPEDSSRGIKIQANPSQSVLTLEGEDVGELDKAMQHISYLNSRQFPTPGIR
RLKITSTVKYVLIGNNKSVFAQXPXVDGYVMVLQPEEPKISLSGVRHFARAASEFESSEG
VFLFPELRIISTITREVEPEGEGDEDPTVQESLVSEEIVHDLDTCEVTVEGEELNREQES
LEVDAVRLQQKGIEVSSSELGVVFTGVGTMASYEEVLRLLRYRNWHTRSLLDRKFKLICS
ELNGRYVSNEFQVEVNVIHTANPMEHASHMAAQPQFVHPEHRSFIDLSGHNLANPHPFAV
VPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENEMDWDDSALTITVNPM
ETYEDQHSSEEEEEEEEEEESEDGDEEDDITSAESESSEEEEGEHGDQQTANRQQQLEWD
DSTLSY
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgcacagaagtgtgggagaccccgatgactggggtcccctggggttttcagcctcagag
ctggccacacggaccctccagcaattcgtcagtgactctggcactggctcccggaggctt
ctgcccgtgggtttctgctctcgaggtggatccaagtcagtggctctcgggagccgggca
gggtgtcggcccggccgagtcttggccgtgggagttaacaagcacaagccatggctggag
cccacgtaccatggcttagtgacagagagcgacagcactgtgctcctggaccccccgctc
atcgccctggacaaggacgcccctctgcgctttgcagagagttttgaggtgacagtcacc
aaagaaggtgagatttgtggatttaaaattcatgggcagaatgtcccctttgatgcagtg
gtagtggataaatccactggtgagggaatcattcgctctaaagagaaactggactgtgaa
cttcagaaagattacacgttctccatccaggcctacgactgcgggaagggaccggatggg
gccagcgtgaaaaagtctcataaagccactgtccacattcaggtgaatgacgtgaacgag
tacgcacctgtgttcaaggagaagtcctacaaggccaccgtcgtggagggcaagcagtac
gacagcatcctgagggtggaggcgctggacgcagactgctccccgcagttcagccagatc
tgcagctacgaaattgtcactccagacgtgcccttcaccgtggacaaagacggttatata
aaaaacacagagaagctgagctacgggaaggagcaccagtacaagctgacggtcacggcc
tacgactgcgggaagaaaagagcaacgcaagacgtgctggtgaagatcagcatcaagccc
acctgcgcccccgggtggcgaggatggaacaacagggtcgagtacgagcccggcactggc
gccttggcgctcttcccaaacgtccacctggagacgtgtgacgagtcggtggcctcggtg
caggcgacggtggagctggagaccagccacatagggaagggctgtgaccgcgacacctac
tcggagaagtcccttcaccggctgtgcggtgccgcgtccggcacagctgagctgctcccc
tccccgagcggctcctccaactggaccgtcggcctccccaccgacaacggccacgacagc
gaccaggtcttcgagttcaacggcactcaggccgtgaggatcccgggcggtgtggtttcc
gtcaaccccaaagagcctttcacgatttctgtgtggatgcggcatgggccgttcggcagg
aagaaggagacggttctttgcagttcagacaaaacagatatgaaccggcaccactattca
ctctatgtccacggctgccggcttgttttcctcctccgtcaggatccttcagaagagaag
aagtacaaacctgcagaattccactggaagttgaatcaggtctgtgacgaggagtggcat
cactacgtcctcaacgtggaaatcccgagcgtgactctctacgtggacggcgtttctcat
gagcccttctctgtgaccgaagattatccgctgcatccagccaagatcgaaactcagctc
gtggttggggcctgctggcaagagtattcaggagttgaaaatgacaatgaaactgagcct
gtgcctgtggcctctgcaggtggtgacctgcacatgacccagtttttccgaggtaatctg
gctggcctgacgatccgttctgggaaacttgcagataagaaggtgatagactgtctgtat
acctgcaaagaggggctggacctgcacgtccctgaagacagcagcagaggcataaagatc
caagccaaccccagtcagtcggtgttgaccttggagggagaggatgttggggagttggat
aaggccatgcagcacatttcctacctgaattcacgacagttccccacccctggaatccga
agactcaaaatcaccagcacggtcaagtatgtgctgattggtaacaataaatctgtcttt
gctcagtgaccnnnggtggatggctacgtgatggtcctacagccggaagagcccaagatc
agcctgagtggcgtccgccattttgctcgagcggcttctgaatttgaaagctcagagggt
gtgttccttttccctgagcttcggatcatcagcaccatcacacgagaagtggagcctgaa
ggggagggggacgaggaccccacagttcaagagtcactggtgtctgaggagatcgtgcac
gacctggacacctgtgaggtcacggtggagggagaggaactgaaccgagagcaggagagc
ctggaggtggacgcggtccgcctgcagcagaagggcatcgaagtcagcagctctgagctg
ggtgtggtcttcacaggtgtcggcaccatggccagctacgaggaggtcttacgccttctg
cggtatcggaactggcacaccaggtctttgctggaccggaagttcaagctcatctgctcc
gagctgaatggccgctacgtcagcaacgagttccaggtggaggtgaacgtcatccacacg
gccaaccccatggagcacgccagccacatggccgcccagccacagttcgtccaccccgag
caccgctccttcattgatctctcgggtcacaacctggccaaccctcacccgttcgcagtt
gtccccagcaccgccaccgtcgtgattgtggtgtgtgtcagcttcctggtgttcatgatc
atcctgggagtgttccggatccgggccgcccatcagaggaccatgcgggaccaggacacc
gggaaggagaacgagatggactgggacgactccgccttgaccatcaccgtaaaccccatg
gagacgtatgaggaccagcacagcagcgaggaggaggaggaggaggaagaggaagaggag
agtgaggacggagacgaggaagacgacatcaccagtgctgagtcggagagcagcgaggag
gaggaaggggagcacggagaccagcagacggcaaacaggcagcagcagctggagtgggac
gactccaccctcagctactga
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