Vicugna pacos (alpaca): 102532307
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Entry
102532307 CDS
T08098
Symbol
RBBP4
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03082
ATP-dependent chromatin remodeling
vpc03083
Polycomb repressive complex
vpc04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102532307 (RBBP4)
03083 Polycomb repressive complex
102532307 (RBBP4)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
102532307 (RBBP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vpc03036
]
102532307 (RBBP4)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
102532307 (RBBP4)
Histone modification proteins
HAT complexes
HATB complex
102532307 (RBBP4)
HDAC complexes
Sin3A-HDAC complex
102532307 (RBBP4)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
102532307 (RBBP4)
PRC2.2
102532307 (RBBP4)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
102532307 (RBBP4)
Heterochromatin formation proteins
Other heterochromatin formation proteins
102532307 (RBBP4)
Chromatin remodeling factors
NuRD complex
102532307 (RBBP4)
NuRF complex
102532307 (RBBP4)
NuRF complex (fruit fly)
102532307 (RBBP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
ANAPC4_WD40
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
eIF2A
MIOS_WD40
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
102532307
NCBI-ProteinID:
XP_006196999
UniProt:
A0A6I9HXM5
LinkDB
All DBs
Position
13
AA seq
425 aa
AA seq
DB search
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP
EGQGS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaggaagcagcctttgatgacgcagtagaggaacgtgtgatcaacgaagag
tacaaaatatggaaaaagaacaccccttttctttacgatttggtgatgacccatgctctg
gagtggcccagcctaactgcacagtggcttccagatgtaaccagaccagaagggaaagat
ttcagcattcatcgacttgtcctggggacacacacatcggatgaacagaaccaccttgtg
atagccagcgtgcagctccctaatgatgatgctcagtttgatgcttcacactacgacagt
gaaaaaggagaattcggaggttttggctcagttagtggaaaaattgaaatagaaatcaag
atcaaccatgaaggagaagtaaacagagcacgttatatgccccagaacccttgcatcatt
gcaacaaagactccatccagtgatgttcttgtttttgactatacgaaacatccttctaaa
ccagacccttctggagagtgcaacccagacttgcgtctccgtggacatcagaaggaaggc
tatgggctttcttggaacccaaatctcagtgggcacttacttagtgcttcagatgaccat
accatctgcctatgggacatcagtgctgttccaaaggaaggtaaagttgtggatgcgaag
accatctttacagggcatacagcagtagtagaagacgtctcttggcatctgctccatgag
tctctgtttgggtcagttgctgatgatcagaaacttatgatctgggatactcgttcaaac
aatacttcgaaaccaagccactcagttgatgctcacactgctgaagtgaactgcctttct
ttcaatccatatagtgagttcattcttgccacaggatcagctgacaagactgttgccttg
tgggatctgagaaatctgaaactgaagttgcattcctttgaatcacataaggatgaaata
ttccaggttcagtggtcacctcacaatgagactattttggcttctagtggtactgatcgc
aggctgaatgtctgggatttaagtaaaattggagaggaacagtctccagaagatgcagaa
gatgggccaccagagttgttgtttattcatggtggtcacactgccaagatatctgatttc
tcctggaatcccaatgaaccttgggtgatttgttctgtatcagaagataatatcatgcaa
gtgtggcaaatggcagagaacatttataatgatgaagaccccgaaggaagtgtggatcca
gaaggacaagggtcctag
DBGET
integrated database retrieval system
