KEGG   Vicugna pacos (alpaca): 102532343
Entry
102532343         CDS       T08098                                 
Symbol
CCNT1
Name
(RefSeq) cyclin-T1 isoform X1
  KO
K15188  cyclin T
Organism
vpc  Vicugna pacos (alpaca)
Pathway
vpc03250  Viral life cycle - HIV-1
vpc05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    102532343 (CCNT1)
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    102532343 (CCNT1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vpc03021]
    102532343 (CCNT1)
Transcription machinery [BR:vpc03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     102532343 (CCNT1)
    Brd4/P-TEFb complex
     102532343 (CCNT1)
    7SK RNP complex
     102532343 (CCNT1)
SSDB
Motif
Pfam: CycT2-like_C Cyclin_N
Other DBs
NCBI-GeneID: 102532343
NCBI-ProteinID: XP_006202978
UniProt: A0A6I9I411
LinkDB
Position
12
AA seq 727 aa
MEGERKNNNKRWYFTREQLENSPSRRFGVDPDKELSYRQQAANLLQDMGQRLYVSQLTIN
TAIVYMHRFYMIQSFTQFHRNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQESLPD
TRSETYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATN
SLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDATVTLELLDELTHE
FLQILEKTPNRLKRIRNWRACQAAMKTKADDRGTDENTSEQTILNMISQSSSDTTIAGLM
SMSASSTTSAVPSLPATGESTSNLSSVEMLPGERWLSSHPPFKVEPAQGHRTSENLALIG
VDHSLQQDSSNTFISQKQNSKSVPSAKVSLKEYRAKHAEELAAQKRQLENMEANVKSQYA
YAAQNLLSHHDSHSSVILKMPMEGSENPERPFLEKSDKTAFKMRIPVTSGEKPASSKPEE
IKMRIKVHAAPDKHNSVDDSVTKGREHKEKHKTHPSNHHHHHNHHSHKHSHSQLPAGTGN
KRPSDPKHSSQTSTLAHKPYSLSSSFSSSSSSRKRPLPEETGGAVFEHSAKTAKSTKSSS
MNFSFPPLPAMAQLPGHSSDTSGLPFSQPSCKTRVPHVKLDKGSTGANGHNATQTIDYQD
TVNMLHSLLSAQGVQPTQPPAFEFVHSYSEYLNPRAGGMSSRPGNTDKPRLPPLPSEPPP
PLPPLPK
NT seq 2184 nt   +upstreamnt  +downstreamnt
atggagggagagaggaagaataacaataaacggtggtattttactcgagaacagctggaa
aatagcccatcccgtcgttttggcgtggacccagataaagaactttcttatcgccagcag
gcggccaatctgctccaggacatgggccagcgtctttacgtctcacaattgactatcaac
actgctatagtatacatgcatcgattctacatgattcagtcctttacacagttccatcga
aattctgtggctccagcagccttgtttctggcagccaaagtagaggagcagcccaaaaag
ttggagcatgtcatcaaggtagcacatacttgtctccatccacaggaatcacttcctgat
actaggagtgagacttatctacaacaagttcaagatctggtgatattagaaagcataatt
ctgcagacgttaggctttgaactaacaattgatcacccacatacacatgtggtaaagtgc
actcagcttgttcgagcaagcaaggacttagcacagacttcttacttcatggcaaccaac
agcctgcatttgaccacatttagcctgcagtacacacctcctgtggtggcctgtgtctgc
attcatctggcttgcaagtggtccaactgggagatcccagtctcaactgatgggaagcac
tggtgggagtatgttgacgccactgtgaccttggaacttttagatgaactgacccatgaa
tttctgcagattctggagaaaacccccaacaggctcaaacgaattcggaattggagggca
tgccaagctgccatgaaaacaaaagcagatgaccgagggacagatgagaacacttcagag
cagacaatcctcaatatgatttcccagagctcttcagacacaactattgcaggtttaatg
agcatgtcagcttcttctaccacaagtgcagtgccttcccttccagccactggagagtca
accagcaacttaagcagcgtggagatgttgcccggtgagcgctggctgtcctcccaccct
ccttttaaagtagaaccagctcagggtcatcggactagtgagaatttagcacttatagga
gttgatcattccttgcaacaggacagttccaatacatttatttcccagaagcagaacagt
aagagtgtgccatcagctaaagtatcactgaaagaataccgtgcaaagcatgcggaagag
ttggctgcccagaagaggcaactggagaatatggaggccaatgtgaagtcacagtatgca
tatgctgcccagaatctcctgtctcaccatgatagccattcttcagtcattctgaaaatg
ccgatggagggctcagaaaaccctgagaggccttttctggagaagtctgacaaaacagct
ttcaaaatgagaatcccagtgacaagtggagagaaacctgcctcttcaaaacctgaggag
ataaaaatgcgcattaaagttcatgctgcacccgacaagcacaattctgtggatgacagc
gtcacaaagggccgggagcacaaagaaaagcacaagactcacccgtctaaccatcatcat
catcataatcaccactcgcacaagcactctcactcacagcttcccgctggtactgggaac
aagcgtccgagtgatccaaaacatagtagccagacaagcaccttagcacacaaaccctat
agcttgtctagctctttctcctcttccagctcttctcgcaaaaggcccctccctgaagag
actggaggggcggtgtttgagcattcagccaagactgccaagagtactaaatcctcttcc
atgaatttctccttccctcctcttcctgcaatggcccagttgcctgggcatagctcagac
acaagtggccttcccttttcacagcccagctgtaaaactcgagttcctcatgtgaaattg
gataaaggctccactggagccaatggtcacaatgcaacccagaccatagactatcaagac
actgtgaatatgcttcactcccttctcagtgcccagggcgttcagcccactcagccccct
gcgtttgaatttgttcattcttacagtgaatatctgaatccacgggctggtggaatgtcc
tccagacctggcaatacagacaaaccccggctgccacctctaccatcagaacctcctcca
ccacttccaccccttcctaagtaa

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