KEGG   Vicugna pacos (alpaca): 102532476
Entry
102532476         CDS       T08098                                 
Symbol
BCAS2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
vpc  Vicugna pacos (alpaca)
Pathway
vpc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102532476 (BCAS2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vpc03041]
    102532476 (BCAS2)
   03400 DNA repair and recombination proteins [BR:vpc03400]
    102532476 (BCAS2)
Spliceosome [BR:vpc03041]
 Complex B
  Other components
   Prp19 complex
    102532476 (BCAS2)
 Complex C
   Prp19-CDC5 complex
    102532476 (BCAS2)
DNA repair and recombination proteins [BR:vpc03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    102532476 (BCAS2)
SSDB
Motif
Pfam: BCAS2 HAUS2 THOC7 Tup_N Transcrip_act OmpH Ribosomal_L29 INO80F Relaxase_C Beta-prop_NUP159_NUP214 DUF3450 PRKG1_interact
Other DBs
NCBI-GeneID: 102532476
NCBI-ProteinID: XP_006213739
UniProt: A0A6J0AV66
LinkDB
Position
9
AA seq 225 aa
MAGTGLVAGEVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLTAPDYSA
FETDIMRNEFERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVR
IENLELMSQHGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLRE
MESTWVSLVSKNYEIERTIVQLENELFQMKQQHGEANKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggcgggcacgggtttggtggctggagaggttgtggtggatgcgctgccgtattttgac
cagggttatgaagcgcctggtgttcgagaagcggctgcggcgctggtggaggaggaaact
cgcagataccgacctactaagaactacctgagctacctgacagccccagattattccgct
ttcgaaactgacataatgagaaatgaatttgaaagattggctgcccgacaaccaattgaa
ttgctcagtatgaaacgatatgaacttccggccccttcctcgggtcagaaaaatgacatt
actgcatggcaagagtgcgtaaacaattctatggcccagttagagcatcaagcggttcga
attgagaacctggaactaatgtcacagcatggatgcaatgcctggaaagtatataatgag
aatctagttcatatgattgaacacgcacagaaggagctccagaagttaaggaaacatatt
caagatttaaactggcagcgaaagaacatgcaactcacagctggatctaaattaagagaa
atggaatcaacttgggtatccctggtcagtaagaattatgagattgaaaggactattgta
caattagaaaatgaactgtttcaaatgaagcagcagcatggagaggcaaacaaagaaaac
atacggcaagacttctga

DBGET integrated database retrieval system