KEGG   Vicugna pacos (alpaca): 102532528
Entry
102532528         CDS       T08098                                 
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X1
  KO
K15623  protein SSXT
Organism
vpc  Vicugna pacos (alpaca)
Pathway
vpc03082  ATP-dependent chromatin remodeling
vpc05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    102532528 (SS18)
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    102532528 (SS18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vpc03036]
    102532528 (SS18)
Chromosome and associated proteins [BR:vpc03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    102532528 (SS18)
   GBAF(ncBAF) complex
    102532528 (SS18)
SSDB
Motif
Pfam: SSXT
Other DBs
NCBI-GeneID: 102532528
NCBI-ProteinID: XP_006205152
UniProt: A0A6I9I723
LinkDB
Position
24
AA seq 418 aa
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQ
NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
MSQGQPMANYGPRPNMNMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ
GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPG
QQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPAQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgtccgtggcgttcgcggccccgaggcagcgaggcaagggggagatcactccggctgcg
attcagaagatgttggatgaaaacaaccatcttattcagtgtataatggactatcagaat
aaaggaaagacctcggagtgttctcagtatcagcagatgttgcatacaaatttggtctac
cttgctacaatagcagattctaatcaaaatatgcagtctcttttaccagcaccacccaca
cagaatatgcctatgggtcctggagggatgaatcagagcggccctcccccacctccacgc
tcgcacaacatgccttcagatggaatggtaggtgggggtcctcctgcaccacacatgcag
aaccagatgaacggccagatgcctgggcctaaccatatgcctatgcagggacctggaccc
aatcaactcaatatgacaaacagttccatgaacatgccttcaagtagccatggatccatg
ggaggttacaaccattccgtgccatcatcacagagcatgccagtacagaaccagatgacg
atgagtcaagggcagccaatggcaaactatggccccagaccaaatatgaatatgcagccg
aaccagggtccaatgatgcatcagcagcctccttctcagcaatacaatatgccacaggga
ggtgggcagcattaccaaggccagcagccacctatgggaatgatgggtcaagttaaccaa
ggcaatcatatgatgggtcagagacagattcctccctacagaccacctcaacagggccca
ccacagcagtactcaggccaggaagactattatggggaccaatacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcaatattaccctgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacat
tactacgaaggaggaaactcacagtatggccaacagcaagatgcttaccaaggaccacct
ccccagcagggatatccaccccagcagcagcagtaccccgggcagcagggctatccagga
cagcagcagggctacggtccttcacagggcggtccaggtcctcagtatcctaactaccca
cagggacaaggtcagcagtatgggggttacagaccagcacagcctggaccaccacagcca
ccacagcagaggccttatggatatgaccagggacagtatggaaattaccagcagtga

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