Vicugna pacos (alpaca): 102532528
Help
Entry
102532528 CDS
T08098
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03082
ATP-dependent chromatin remodeling
vpc05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102532528 (SS18)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
102532528 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vpc03036
]
102532528 (SS18)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102532528 (SS18)
GBAF(ncBAF) complex
102532528 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
102532528
NCBI-ProteinID:
XP_006205152
UniProt:
A0A6I9I723
LinkDB
All DBs
Position
24
AA seq
418 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQ
NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
MSQGQPMANYGPRPNMNMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ
GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPG
QQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPAQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggcgttcgcggccccgaggcagcgaggcaagggggagatcactccggctgcg
attcagaagatgttggatgaaaacaaccatcttattcagtgtataatggactatcagaat
aaaggaaagacctcggagtgttctcagtatcagcagatgttgcatacaaatttggtctac
cttgctacaatagcagattctaatcaaaatatgcagtctcttttaccagcaccacccaca
cagaatatgcctatgggtcctggagggatgaatcagagcggccctcccccacctccacgc
tcgcacaacatgccttcagatggaatggtaggtgggggtcctcctgcaccacacatgcag
aaccagatgaacggccagatgcctgggcctaaccatatgcctatgcagggacctggaccc
aatcaactcaatatgacaaacagttccatgaacatgccttcaagtagccatggatccatg
ggaggttacaaccattccgtgccatcatcacagagcatgccagtacagaaccagatgacg
atgagtcaagggcagccaatggcaaactatggccccagaccaaatatgaatatgcagccg
aaccagggtccaatgatgcatcagcagcctccttctcagcaatacaatatgccacaggga
ggtgggcagcattaccaaggccagcagccacctatgggaatgatgggtcaagttaaccaa
ggcaatcatatgatgggtcagagacagattcctccctacagaccacctcaacagggccca
ccacagcagtactcaggccaggaagactattatggggaccaatacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcaatattaccctgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacat
tactacgaaggaggaaactcacagtatggccaacagcaagatgcttaccaaggaccacct
ccccagcagggatatccaccccagcagcagcagtaccccgggcagcagggctatccagga
cagcagcagggctacggtccttcacagggcggtccaggtcctcagtatcctaactaccca
cagggacaaggtcagcagtatgggggttacagaccagcacagcctggaccaccacagcca
ccacagcagaggccttatggatatgaccagggacagtatggaaattaccagcagtga
DBGET
integrated database retrieval system