Vicugna pacos (alpaca): 102532660
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Entry
102532660 CDS
T08098
Symbol
SNX27
Name
(RefSeq) sorting nexin-27
KO
K17936
sorting nexin-27
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vpc04131
]
102532660 (SNX27)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
vpc04990
]
102532660 (SNX27)
Membrane trafficking [BR:
vpc04131
]
Protein recycling
Others
Others
102532660 (SNX27)
Domain-containing proteins not elsewhere classified [BR:
vpc04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
102532660 (SNX27)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
RA_2
SNX17-27-31_F1_FERM
PDZ_2
USP7_C2
SNX17_FERM_C
UBX
RBD
RA_3
SNX17-31_F2_FERM
DarA_N
Ras_bdg_2
Pept_S41_N_bact
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
102532660
NCBI-ProteinID:
XP_006217055
UniProt:
A0A6I9IRH2
LinkDB
All DBs
Position
21
AA seq
542 aa
AA seq
DB search
MADEDGEGIHPAAPHRNGGGGGGGGGSGLHCAGNGGGGGGGPRVVRIVKSESGYGFNVRG
QVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVD
LIRAGEKELILTVLSVPPHEADNLDPSDDSLGQSFYDYTEKQAVPISVPTYKHVEQNGEK
FVVYNVYMAGRQLCSKRYREFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGL
EEYLEKVCSIRVIGESDIMQEFLSESDENYNGVSDVELRVALPDGTTVTVRVKKNSTTDQ
VYQAIAAKVGMDSTTVNYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTIRK
WLFTTEEEILLNDNDLAVTYFFHQAVDDVKKGYIKAEEKSYQLQKLYEQRKMVMYLNMLR
TCEGYNEIIFPHCACDSRRKGHVITAISITHFKLHACTEEGQLENQVIAFEWDEMQRWDT
DEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKENIFQMARSQQRDV
AT
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggacggggaagggattcaccccgcagcccctcacaggaacggaggtggc
ggcggcggcggtgggggttctgggctccactgcgccgggaacggcggcggcggaggcggt
ggcccgcgggtcgtgcgaatcgtcaagtccgagtccggctacggcttcaacgtgcgaggc
caagtgagcgagggcgggcaactgcggagcatcaacggggagctgtacgccccgctgcag
catgtgagcgccgtgctgcccgggggggcggccgaccgggccggggtgcgcaagggggac
cgcattctggaggtgaacggcgtgaatgttgagggggcgacacacaagcaggtggtggac
ctgatccgagcaggcgagaaggaattgatcttgacagtgttatctgtacctcctcatgag
gcagacaacctagatcccagtgacgactcgttgggacaatcattttatgattacacagaa
aagcaagcagtgcccatatcggtccccacatacaaacatgtggagcagaatggtgagaag
ttcgtggtatacaatgtttacatggctgggaggcagctctgttctaagcggtaccgggag
tttgccattctgcaccagaacctgaagagagagtttgccaactttacatttccccgactt
ccagggaagtggccattctctttatcagaacagcagttagatgcccgacgtcgggggttg
gaagaatatctagaaaaagtgtgctcaatacgagtcattggtgagagtgacatcatgcaa
gaattcctgtcagaatcagatgagaactacaatggcgtgtccgacgtagagctgagagta
gcattaccagatggaactacagttacagtcagggttaaaaagaacagtactacagaccaa
gtatatcaggctattgcagcaaaggttggcatggacagtacgacagtgaattactttgcc
ttatttgaagtgatcaatcattcctttgtgcgtaagctggcacctaatgaatttcctcat
aaactctacgttcagaattacacatcagctgtgccaggcacctgcctgactattcgaaag
tggctttttaccacagaagaagaaatcctcttaaacgacaatgaccttgctgttacctac
ttctttcatcaggctgttgatgatgtgaaaaaaggctacatcaaagcagaggaaaagtcc
taccagttacagaagctgtatgaacaaagaaaaatggtcatgtacctcaacatgctaagg
acctgcgagggctacaatgaaatcatcttcccgcactgtgcctgcgactccaggaggaag
gggcatgtaatcacagccatcagcattacgcactttaaactgcatgcctgcactgaggag
ggacagctggagaaccaggtaatagcatttgaatgggatgagatgcaacggtgggataca
gatgaagaaggaatggccttctgttttgaatatgcacgaggagagaagaagcctcgatgg
gttaaaatcttcaccccctatttcaattacatgcatgagtgcttcgagagggtgttctgc
gagctcaagtggagaaaagagaacattttccagatggcgaggtcacagcagagggacgtg
gccacctag
DBGET
integrated database retrieval system