Vicugna pacos (alpaca): 102533228
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Entry
102533228 CDS
T08098
Symbol
SAMD4A
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpc03019
]
102533228 (SAMD4A)
Messenger RNA biogenesis [BR:
vpc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
102533228 (SAMD4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
102533228
NCBI-ProteinID:
XP_006199822
UniProt:
A0A6I9I1A1
LinkDB
All DBs
Position
6
AA seq
720 aa
AA seq
DB search
MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSQTQARFLQLCLEHSLADCAELHVLEG
EANSPGIINQWQQESKDKVISLLLTHLPLLKPGNLDAKVEYMKLLPKILAHSIEHNQHIE
ESRQLLSYALIHPATSLEDRSALAMWLNHLEDRTSTSFGGQSRGRSDSVDYGQTHYYHQR
QNSDDKLNGWQNSRDSGICISASNWQDKSLGCENGHVPLYSSSSVPTTINTIGTSTSTIL
SGQAHHSPLKRSVSLTPPMNVPNQPLGHGWMSHEDLRARGPQCLPSDHAPLSPQSSVASS
GSGGSEHLEDQTTARNTFQEEGSGMKDVPAWLKSLRLHKYAALFSQMTYEEMMALTECQL
EAQNVTKGARHKIVISIQKLKERQNLLKSLERDIIEGGSLRIPLQELHQMILTPIKAYSS
PSTTPEARRRDTQAPHPPSLMGPESQSPDCKDGAVAAGATATATASAGASGGLQPHQLSS
CEGELAVTPLPEGDLPGQFTRVMGKVCTQLLVSRPDEENISSYLQLIDKCLIHEAFTETQ
KKRLLSWKQQVQKLFRSFPRKTLLDISGYRQQRNRGFGQSNSLPTASSVGGGMGRRNPRQ
YQIPSRNVPSARLGLLGTSGFVSSTQRNTAANPTIMKQGRQNLWFANPGGSNSMPSRTHS
SVQRTRSLPVHTSPQNMLMFQQPEFQLPVTEPDINNRLESLCLSMTEHALGDGVDRTSTI
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgcgaccaggtcggggtgctggcgggctggtttaagggctggaacgagtgc
gaacagactgttgcgctgctgtcgctgctcaagcgcgtgagccagacccaggcccgcttc
ctccagctctgcctggagcactctctggccgactgcgccgagctgcacgtcctcgaaggc
gaggccaacagtccgggaatcattaaccaatggcaacaggaatccaaggataaagttatt
tccctcctgttaactcacctgcctttgctgaagccaggaaaccttgacgcaaaagtagag
tatatgaaactgctgcccaaaatcctggcgcactccattgaacacaaccagcacatcgag
gagagcaggcagctgctgtcctatgctttgatacatccggccacttcactggaagaccgc
agtgctttggccatgtggctgaaccacttggaggaccgcacatcaaccagctttggcggc
cagagccgaggccgctcggactctgtggattatgggcagacacactactatcaccaaaga
cagaactccgacgacaagctcaatgggtggcagaactctcgggattctgggatttgcatc
agcgcctccaactggcaggacaaaagcctggggtgtgagaatggccatgtgcccctctac
tcctcttcgtccgtgcccaccacgatcaatacgattggaaccagcacaagtacaattctc
tcaggccaggcacaccacagccctttgaaacgatctgtgtcccttaccccacccatgaat
gtgccaaaccagcctctaggacatggatggatgtctcatgaggacttacgagctagagga
ccccagtgcctcccatccgatcatgcccccctgtctccacaaagcagtgtagcctcttca
ggaagtggtgggagtgaacacttagaagatcagaccactgctcgtaacacattccaagaa
gaaggtagtggtatgaaagatgttccagcctggttaaagagcctccgcctgcacaagtat
gccgcgcttttctcccagatgacctacgaggagatgatggccctcactgagtgccagctg
gaggctcagaatgttaccaaaggtgcaagacacaaaattgtcatcagtattcagaagctc
aaagagagacaaaacctcctgaagtctttggaaagggacatcatcgagggtggcagcctg
cgcatcccgctccaggagctgcaccagatgatcctgactcccatcaaggcctacagctcc
ccgagcaccacccccgaggctcgccgccgggacacccaggccccgcacccaccctcgctg
atgggccctgagagccagagccccgactgcaaagatggtgctgtggccgccggagccaca
gccactgccacagcctcagccggggccagcggtgggctccagccacaccagctgagcagc
tgtgaaggggagctggctgtcacccccttgccggagggagatctcccggggcagttcaca
cgcgtcatgggaaaagtgtgcacacagctcttggtctccagacccgatgaggaaaatata
agttcctatttacagctcatagacaagtgtctgattcatgaggcatttacagagacacag
aaaaaaagattgttgtcatggaagcagcaggtgcagaagctctttcggtctttccctcgg
aaaacccttctagacatatcaggatatcgacagcaaagaaatcgtggctttgggcagtcc
aactctctcccgacggccagctctgtgggcggcggcatgggcagacggaacccacgccag
taccagatcccctcccggaatgtcccttctgcccgccttggcctcttgggcaccagtgga
ttcgtcagctccacccagcgcaacacagccgccaaccccaccatcatgaaacaaggaaga
cagaacctctggttcgccaaccccgggggcagcaatagcatgccaagccgcacccacagc
tcagtccaaaggacccgctcactgcccgtgcatacttcgccacagaatatgctgatgttc
cagcagccagaattccagctgcctgtgactgaacctgacatcaacaacaggctggagtcc
ttgtgcctcagtatgaccgagcacgccctgggagacggggttgaccgcacctccacaatc
tag
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