Vicugna pacos (alpaca): 102533372
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Entry
102533372 CDS
T08098
Symbol
WDR43
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102533372 (WDR43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vpc03009
]
102533372 (WDR43)
Ribosome biogenesis [BR:
vpc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
102533372 (WDR43)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Utp12
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
WDR55
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
WDR90_beta-prop_4th
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_ACSF4
DSE1_N
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_VPS8
Beta-prop_NOL10_N
WD40_like
UTP15_C
Tricorn_2nd
DUF6235
Zip
RNA_pol_Rpc4
Raftlin
Motif
Other DBs
NCBI-GeneID:
102533372
NCBI-ProteinID:
XP_015098127
LinkDB
All DBs
Position
15
AA seq
678 aa
AA seq
DB search
MAAGGGGVVDPLSPAGVPCAFSPQSQAFFALASTDGHLRVWETANNRLHQEYVPSAHLSG
TCTCLAWAPARLQAKEGPQRKKRKSEAIGTSNQVDLLALGTAVGSILLYSTVKAELHSKL
ISGGHDNKVNCIQWHQDNGCLYSCSDDKHIVEWNTQTCKVKCKWKGDNSSVSSLCISPDG
KMLLSAGRTIKLWVLETKEVYRHFTGHATPVSSLTFTTIRPPNESQPFDGITGLYFLSGA
VHDRLLNVWQVRSENKEKNAVMSFTVTDEPIYIDLTLSENKEEPVKLAVVCRDGQVHLFE
HVLNGYCKKPLTSNCTIQIATPGKGKKSTPKPIPVLAAGFCSDKMSLLLVYGSWFQPTIE
RVALNSKEPHMCLVRDISNCWAPKLETAITKVRTPLINSEAKVLVPGIPGHHAAIKPAPP
QTGQVESKRKLGENEVIQSSXPFLSLKFKITWEILTNNIYILIYQGAESNDFEILNKVLQ
TKNLNLIKRTVLRMPLHAVIPLLQELTKRLQGHPNSAVLMVQWLKCVLTVHASYLSTLPD
LVPQLGTLYQLMESRVKTFQKLSHLHGKLILLITQVTASEKAKGTTCPAQKAKLVYEEES
SEEESDDEIADKDSDDNWDEDEEEKESEKGEDVDEENEEEDEDTEEKDEENGEDGDVASE
KELNGDSDLDPENESEEE
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcggcggtggtgttgtggaccccctttcccccgctggggtcccctgcgct
ttctccccacaaagtcaggcctttttcgctttggcgtctaccgacggtcacctgcgagta
tgggagacagccaacaaccggttgcaccaggagtacgtgccttccgcgcacctcagcggt
acctgcacttgtctggcctgggcgccagcgcggctgcaggccaaggaaggtccgcagagg
aaaaaaaggaaatcagaagctattggaacgagtaaccaggttgacttgttggctcttggt
acagcagttggtagtattttattatacagtacagtaaaagcagaactacacagtaaattg
ataagtggtggacatgacaacaaagtcaattgcatacagtggcatcaagacaatggctgt
ttgtatagttgttcagatgataaacacattgtggaatggaacacacagacgtgcaaagta
aagtgcaaatggaaaggagataatagcagtgtcagttccctgtgtatcagcccagatgga
aagatgttgctttcagctggccgaacaatcaaactatgggttttggagaccaaagaagtc
tacaggcacttcacgggacatgcgacgccagtttcatcacttacgttcactactatccga
cctcctaatgagagccaaccctttgatggaattacaggtctttatttcttatctggagca
gtacatgaccggttacttaatgtctggcaggtccggtcagaaaacaaagaaaagaacgca
gtgatgtcttttacagtgacagatgaacctatttatattgacttgactttgtcagaaaac
aaagaagagcctgtcaaattagctgttgtttgcagagatggtcaagttcatctttttgaa
catgtattaaatggatactgtaaaaagcctttgacttcaaactgcacaattcagatagca
acaccagggaaaggcaagaagtcaacaccaaaacccatccctgttctagcagctgggttt
tgctcagacaaaatgtcactgttgcttgtgtatggcagttggtttcagcccaccattgag
cgagtggctttaaattccaaagaacctcatatgtgtttagtaagagatatttcaaactgc
tgggcccccaaactagaaacagctataacaaaggtgagaacaccattgataaattctgaa
gcaaaagttctggtgcctgggatacctggacatcatgcagctatcaagcctgctcctcca
cagactgggcaagtagagagcaagaggaaattaggggaaaatgaggtaatacaatcatcc
tgaccatttttgagtttgaaatttaagattacttgggaaattctaacaaataacatttat
attttgatttatcaaggggctgaaagtaatgattttgaaatactaaataaagtacttcag
actaagaatttaaacctaataaagagaactgtattaaggatgcccctgcatgctgttatt
ccattattgcaagagcttacaaagagattacaaggtcatcctaatagtgctgttttaatg
gttcagtggctaaaatgtgtgttaacggtccacgcatcctacttatccacattgcctgac
ctggtaccccagctggggacactataccagttaatggaaagcagagtaaaaacttttcag
aaactctcccaccttcatggaaagctcatccttctaattacgcaggttacagcatcagaa
aaagcaaagggaacgacttgtcctgcacagaaggcaaagttggtgtatgaagaagaatct
tctgaagaggagtctgatgatgaaatagcagataaggattctgatgataattgggatgaa
gatgaggaagagaaagaaagtgaaaaaggtgaggatgttgatgaagagaatgaagaggaa
gatgaggatactgaagaaaaagatgaagaaaatggtgaggatggagatgtggcaagtgaa
aaggaattaaatggagactctgatttagatcccgaaaatgaaagtgaagaagaatga
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