KEGG   Vicugna pacos (alpaca): 102533539
Entry
102533539         CDS       T08098                                 
Symbol
CFAP43
Name
(RefSeq) LOW QUALITY PROTEIN: cilia- and flagella-associated protein 43
  KO
K24223  cilia- and flagella-associated protein 43
Organism
vpc  Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:vpc03037]
    102533539 (CFAP43)
Cilium and associated proteins [BR:vpc03037]
 Motile cilia and associated proteins
  Tether/Tether head (T/TH) complex
   102533539 (CFAP43)
SSDB
Motif
Pfam: CC_Cfap43 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR36-Utp21_1st Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz CFAP251_N Beta-prop_WDR3_1st Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_HPS5
Other DBs
NCBI-GeneID: 102533539
NCBI-ProteinID: XP_006216403
LinkDB
Position
11
AA seq 1662 aa
MAQGRERDEAHNVAIGSSLSVRWVQGFPKQNVHFVNDSTICYPCGNFVIFLNIETKKKTV
LQCMNGIVGVVATNVPYEVVAFSDRRLRPLIYIYNFPGLTRRTKLKGDVLLDYTLLSFSY
CGTYLASYSSLPEFELALWNWELGVILCKKSQPGTDVNQMTFNPMNWHQLCLSSPSALTV
WTIERSNQEHYLKAKSVKLPVEDGSFFNETDVIFPQSLPKDPIYGPVLPVSAIAGLVGEE
AETFRPKDDLYTSLHPTMHCWTPTSDLYVGCEEGHLLVISGENFKATVLNKMEDEPPRVG
RNLISPVTMAYQKGGVLASGIDGFVYSFLIKDTNYKVEDFLEVEGPVEHLMFSPSYRMLL
IQTDKGSIYIYTFGEEPTFEKVLEACDGKFQATDFITPGNEYFMTLTQSGEVCVWGIDDG
VCVSRICLNMPATVLACSPSSLSAAVGTQDGFVHFLDVQDVESPQAIHKAFLSKSPVQHL
LYDQRGIYLLVGTSEGYIFVINAKPSSLFQILGFIEVGKDILQISTVSLLEIDMVKVMVL
SPLPGTGRSRLEILTLPKRLPQVSASFADQRGRLRDEFVPKSVYEIEHTLSSAVLSFRSN
QIYGFCNQVPYICSYLLPEKEHSGICILKPYQKVQSKQYGPGMLSLSPHGLWLITIAKCG
FLCIRDIQTLETFARCRSHSPQGHGIQLVRISVDGQNILVNGRDDGTLVNLRWRQVGGNL
TNEILEHSQQLLTSLRNTMNEENDYLSITRRDSLDSGSEAEHANMKSSSSQEELVHVDNM
EEIPWIEQKSQEAIKKEVKLFSNKRTEIKRGIKALVKTVLDMMKENKAVDNIAKLEQQEF
GLDLEELERLHDESEEEVAKIRKDIEMQNLAKRYLAELIKEECWNSMAVKGRALKCFHIP
YVVENFPMKERTDEELKELKRVVQQKNIEAECLKLQKEIVEAQSGITLVKKHNEEEDEEE
EDKTVKDSNLPNYLLGSLSTDFRVHTSLLSSQLELHSREEKINQIILLKDIIYKVKTAFN
NEFDAAYKQKEIEIARIKERNVRIHEIILDLDLQESVWQPEFEDCEKPERTLVVENAEIR
TLKHVTAWQKAKTELLLSDRFXPWLFPKGSNLRRQALMDMMGGVLEVKKEDILRMVIPQP
AFMAKPETLWSEEERKKFKEYEKKVKELNEERDKYRKSLEAEMKKLQNAIQESTQSFDEH
LKRLFEKRVKAEMVVNQEELKINNLVFSLLLDEEISSREAFLNNYLTRKQEEKSQTAEAI
RKAREDLDVYKEHYDNLVAEDKVLDRSFKKEFSEIPSYQVDILYKLFKRRPRIHKQKVHS
DTNSLVPFGERPGSGKLNKDAFTQLMKAMDDLDNINNMPEGLDPSVWDHFCRTRRTKVEN
EQKVKQKAAGLMEMAAFLRRRTDDDEKVQHEIEKVFHELILLQEDKVKFQLNLTIQILLK
QGQVELENFQLLLDYSDAVLINRNIIEDLNSVIRTQGQKKVASMMESKEVHKGIFQIEWE
HKKMEMEMEDLNQKAWDIQMLFFSRDHQKYLNEPNYDTLIAVQIGIMEQTIAIIDKTHKK
NVENCKKLLKKLGRCSNQKDVANYTLSCNLREELMAVSERKDICNAMGSKLTCEKIAKER
YENMMQYQKLTKISREQAEQISILQAEVERLRMKTFPALVQM
NT seq 4989 nt   +upstreamnt  +downstreamnt
atggcgcaaggccgggagcgagacgaggcccacaacgtcgctatcggctcgtccctgtcc
gtgagatgggtgcaaggattccctaagcagaatgttcattttgtcaacgacagtaccatt
tgctacccttgtgggaattttgtgatatttcttaatattgaaaccaagaaaaagactgta
ctccagtgtatgaatggaattgtgggcgtcgtggcaactaatgttccttatgaagttgtg
gctttttctgaccggcggctaagacccctcatctacatatacaactttcctggattgacc
agaaggaccaaattaaaaggcgatgttcttctggactacactttactttcgttcagttac
tgtggcacctacttggctagttactcctccctcccagaatttgaactggccctctggaac
tgggaattgggtgtcattttgtgcaaaaagtcacaacctgggacagatgtgaaccagatg
acttttaaccccatgaactggcaccagctgtgcttgtcaagtccaagtgcattgactgtg
tggaccattgaaagaagtaaccaggagcattatctcaaagcaaagtcagtaaaactgcct
gtggaagatgggtcattctttaatgaaacggatgtaatttttccccagtcattgcccaag
gatcctatctacggacctgtgctcccagtgtcggccatcgccgggctagtaggtgaagag
gcagaaactttcaggcctaaagatgatctatatacttcgcttcacccgactatgcactgc
tggactccaacaagtgacctgtacgttggctgtgaagagggtcatcttttagtgataagc
ggagaaaacttcaaggcgactgtgcttaacaagatggaggacgagccaccaagggttggg
agaaatcttatcagtccagtcaccatggcatatcagaaaggaggcgtgcttgcttctgga
attgatggctttgtgtattcttttcttattaaagatacaaattacaaagtggaggatttt
ctcgaggttgaagggcccgtggaacatttgatgttttctcccagttacagaatgttgctg
attcagacagacaagggatctatttatatttacacttttggtgaggagccaacctttgaa
aaagtcctcgaagcttgtgatgggaagtttcaggcaacagactttatcacacctggaaat
gaatacttcatgacactcacacagtcaggggaagtttgtgtttggggtatagatgatggt
gtttgtgtcagcaggatttgtctgaatatgccagcaacagttctggcttgctctccctca
tccctctctgcggccgtgggcacccaggatggctttgtccacttccttgatgtccaggat
gtcgaatcccctcaggcaattcacaaggcctttctctccaaatcgccagtgcagcacctc
ctgtatgaccagagaggcatatatctattagttggaacatcagaaggatacatttttgtt
atcaatgccaaaccctcaagcttatttcagattcttggattcatagaggtgggcaaagac
attttacaaatatccacagtttctcttctggaaatagacatggtgaaagtgatggtgctt
tccccacttccaggaacgggaagaagcaggctggaaatacttactttgcctaaaagacta
ccacaagtttctgcaagctttgccgatcagcgagggaggctgagagatgaattcgttcct
aagtccgtgtatgagatagagcacactctgtcctctgctgtcttaagctttcgaagcaac
cagatatatggcttctgtaatcaagtgccgtacatctgcagctatcttcttcctgaaaaa
gaacatagcggaatttgcattcttaagccatatcaaaaagtgcaaagcaaacaatatgga
cctggaatgctctctctgtctccacatggattgtggctcataacaatagctaaatgtgga
tttctatgtatccgagatattcaaactttggaaacatttgctcggtgtcggagtcattct
ccccaggggcacgggattcagctggtgagaatttccgtggatggacaaaacattctagtg
aatgggagagatgatggcacccttgttaatctaagatggaggcaggttggaggaaactta
actaatgaaattcttgagcatagccagcaacttttaacttctctgagaaacaccatgaat
gaagagaatgattatttaagtataacacgaagagattccttggattcaggatcagaagct
gaacatgcaaatatgaagtcaagctcatcgcaagaggaattagtccacgttgataatatg
gaagaaattccctggatagaacaaaaaagccaagaggccatcaaaaaggaggttaaattg
ttttccaacaaaaggacagagataaaaagaggaatcaaagcacttgttaaaactgttctg
gacatgatgaaagaaaacaaagcagtagataatatcgcaaaattagagcaacaagaattt
ggcctggatcttgaggaactggaaaggctccatgatgaaagtgaggaagaagtggcaaag
ataagaaaggatattgagatgcaaaacctagccaagagatatttggctgaactaatcaaa
gaggaatgctggaattcgatggctgtgaaaggccgagctcttaagtgctttcatatcccc
tatgtggtcgagaacttcccaatgaaagaacgcacagatgaagagttgaaagaattgaag
agagttgtgcagcaaaagaatattgaagcagagtgtcttaaactgcagaaggaaattgta
gaggctcagtctggaattaccttggttaaaaagcataatgaggaggaggatgaagaagag
gaagataagacagtaaaagacagcaacttgcccaattacctgcttggcagtctgagtact
gattttagggtacatacttctttgctgtccagccagttggagcttcattccagagaggag
aaaatcaaccaaattatattactgaaagatattatttataaggtaaaaactgctttcaat
aatgagtttgatgctgcatataaacaaaaagagattgaaattgcccgtataaaggaaaga
aatgtaagaattcacgaaattattttagatctggacttgcaagaatcagtctggcaacca
gaatttgaggactgtgagaagccagagagaacccttgttgtggaaaatgctgagattaga
actctgaaacatgttactgcatggcaaaaagccaaaacagaattacttctcagtgaccgt
ttctgaccctggctctttcccaagggctccaacttaagacgccaagccctcatggacatg
atgggaggagttctggaagttaagaaggaagacattttgagaatggtgattcctcaacct
gctttcatggcaaaacctgagactttgtggtctgaagaagaaaggaaaaagttcaaagaa
tatgagaaaaaagtcaaggagttaaatgaagaaagagataagtacagaaagtcgttagaa
gcagaaatgaagaaacttcaaaatgctattcaagaaagcacacagagttttgatgaacat
ttgaaaagactctttgaaaagagagtgaaggcagagatggttgtcaaccaggaggaattg
aaaataaataaccttgttttttctttactgttggatgaagaaataagctccagagaagca
ttcctgaacaactaccttacaaggaagcaggaggagaaaagccagactgcagaggccatc
cggaaagccagagaagacctcgatgtgtacaaggagcactatgacaacttagtggcagaa
gacaaagttttagatcgcagttttaaaaaggaattttctgaaattcctagttatcaagtg
gacatactgtacaaactttttaaacgtcgaccaaggattcacaaacagaaagtgcactca
gatacaaacagtcttgtgccttttggagaacgaccaggatctgggaaattgaataaggat
gccttcacccaattaatgaaagccatggatgacttggacaatattaataacatgccagaa
ggcttggacccctcggtctgggatcatttctgcaggaccagacgaacgaaagtggaaaat
gaacagaaagtaaagcagaaagcagctggtttaatggaaatggcggctttcctccggagg
agaactgacgatgatgagaaggtgcaacatgaaatagagaaagtgttccatgagctcatc
ctattacaagaagacaaagtgaaattccagctgaatttgacaattcaaatcctccttaaa
caaggacaagtagaactggagaatttccagttactactggattattctgatgcagtcctc
atcaacaggaacataattgaagacttaaattctgtgattcggactcaaggacaaaagaaa
gttgctagcatgatggaaagtaaagaggtccacaaaggaatatttcagattgagtgggaa
cataagaaaatggagatggaaatggaagatctaaatcagaaggcttgggatattcagatg
ctgtttttttcaagagatcatcaaaagtacctaaatgaaccaaactatgacactctgatt
gccgttcagattggaataatggagcaaaccattgctattatagataagacccacaaaaag
aatgtggaaaactgcaaaaaactacttaaaaaattgggaaggtgcagcaatcaaaaagat
gtagcaaattatactctaagctgcaatttacgagaagagttgatggctgtctcagagaga
aaagacatctgtaatgcaatggggtctaaactgacttgtgaaaagattgccaaagaacgc
tatgaaaacatgatgcaataccaaaagttaacaaaaatttcaagagaacaagctgagcaa
atttcaatactacaggctgaagttgaaagattaaggatgaaaacatttcctgctcttgtt
caaatgtaa

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