Vicugna pacos (alpaca): 102533764
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Entry
102533764 CDS
T08098
Symbol
EMG1
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1 isoform X1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102533764 (EMG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vpc03009
]
102533764 (EMG1)
Enzymes [BR:
vpc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
102533764 (EMG1)
Ribosome biogenesis [BR:
vpc03009
]
Eukaryotic type
90S particles
Other 90S particles
102533764 (EMG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMG1
C2c1_helical_1st
TetR_C_43
Motif
Other DBs
NCBI-GeneID:
102533764
NCBI-ProteinID:
XP_006210947
UniProt:
A0A6I9IEN5
LinkDB
All DBs
Position
34
AA seq
244 aa
AA seq
DB search
MAAPSGGFQPRERRAEEQDEGWDAVVPKRPRLGAGSKSGGRRLIVVLEGASLETVKVGKT
YELLNCDKHKSMLLKNGRDPGEVRPDIAHQSLLMLMDSPLNRAGLLQVYVHTQKNVLIEV
NPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCMKIGTSFST
PAVSDVRELVPSSDPVVFVVGAFAHGKVDVEYTEKMVSISNYPLSAALTCAKLTTAFEEV
WGVI
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcccagtggtggattccaacctcgtgagcggcgcgcggaggagcaggatgag
ggctgggatgctgtggtgcccaagcggccccgactcggggcgggaagcaagagcggaggc
cgtaggctcattgtggtattggaaggagccagtctggagacagtcaaggtggggaagacg
tatgagctgctcaactgtgacaagcacaagtccatgctgttgaagaacgggcgggaccct
ggggaagtgagaccagacatagctcaccagagtttactgatgctgatggacagtcccctg
aaccgggctggcttgctgcaggtctatgtccacacgcagaagaacgtgctgattgaagtg
aacccccagacacgaattcccaggacctttgaccgcttttgtggtctcatggttcagctt
ttacacaaactcagcgttcgagcggctgacggcccccagaagctcttgaaggtgattaag
aatccagtgtcagatcacttcccagttggatgtatgaaaattggcacttctttttccacc
ccggcggtcagtgatgtccgcgagctggtgcccagcagcgaccctgtcgtctttgtggtg
ggggcctttgcccatggcaaggtggatgtagagtacacggagaagatggtgtccatcagc
aactacccgctttctgctgccctcacctgtgcaaaactcaccacagcctttgaagaagtg
tggggggtcatctga
DBGET
integrated database retrieval system
