Vicugna pacos (alpaca): 102533885
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Entry
102533885 CDS
T08098
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3 isoform X4
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03008
Ribosome biogenesis in eukaryotes
vpc05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102533885 (DROSHA)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
102533885 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpc03019
]
102533885 (DROSHA)
03009 Ribosome biogenesis [BR:
vpc03009
]
102533885 (DROSHA)
03036 Chromosome and associated proteins [BR:
vpc03036
]
102533885 (DROSHA)
Enzymes [BR:
vpc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
102533885 (DROSHA)
Messenger RNA biogenesis [BR:
vpc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
102533885 (DROSHA)
Ribosome biogenesis [BR:
vpc03009
]
Eukaryotic type
90S particles
RNase
102533885 (DROSHA)
Prokaryotic type
rRNA processing factors
102533885 (DROSHA)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
102533885 (DROSHA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
5_3_exonuc
YcaO
Motif
Other DBs
NCBI-GeneID:
102533885
NCBI-ProteinID:
XP_006199700
UniProt:
A0ABM5D1Z1
LinkDB
All DBs
Position
3
AA seq
1336 aa
AA seq
DB search
MQGSTCHRMSFHPGRGCPRGRGGHGARPSAPAFRPQNLRLLHPQQPPVQYQYEPPSAPST
TFSNSPAPSFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRPPFPVPPCFPPMP
PPMPCPNNPPVPGAPPGQGAFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPN
FNSFQNNSSSFPPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGRG
ERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDSRRSP
SLERSYKKEYKRSGSRSPSREKKRARWEEEKDRWSDNQSSGKEKNYTSIKEKEPEEVLPD
KNEEEEEELLKPVWIRCTHSENYYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEK
AKAARPPWEPPKTKLDEDLESSSESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDRL
HDELWYNDPGQMNDGPLCKCSAKARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRITV
SPPTNFLTDRPTVIEYDDHEYIFEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPE
NFCVKGLELFSLFLFRDILELYDWNLKGPLFEDSPPCCPRFHFMPRFVRFLPDGGKEVLS
MHQILLYLLRCSKALVPEEEIANMLQWEELEWQKYAEECKGMIVTNPGTKPSSVRIDQLD
REQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQKL
AQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMH
LDKLIGYTFQDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMR
KKGINTLINIMSRLGQDDPTPSRINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLAT
YRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLE
EAKQLFGRLLFNDPDLREVWLNYPLHPLQLQEPNTDRQLIETSPVLQKLTEFEDAIGVIF
THVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLR
SSLVNNRTQAKVAEELGMQEYAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVH
TFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTY
TVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWE
REHQEKEPDETEDIKK
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggcagtacatgtcatagaatgtcgttccacccaggacgagggtgtccccgaggg
cgagggggacatggagccagaccctcagcaccagccttcaggccccaaaacctgagactg
cttcaccctcagcagcctcctgtgcaataccaatacgaacctccgagtgccccttccacc
accttctccaactccccagcacccagttttctgcctccacggccagattttgtacccttc
cctccacccatgcctccgtcagcacaaggccccctgcccccctgcccaatccggcccccc
ttccccaaccaccagatgaggccccctttccctgtgcctccctgttttcctcccatgccg
cctccgatgccctgtcccaataaccccccggtccctggagcgcctcctggacaaggcgct
ttccccttcatgatgccccctccgtccatgccccaccccccaccccctcccgtcatgcca
cagcaggtcaattaccagtaccctcctggctactcgcaccacaacttcccacctcccaat
tttaatagcttccagaacaactccagttccttcccacccagtgctaataatagcagtagt
cctcattttaggcatctccctccatacccactcccaaaggctcccagtgagagaaggtcc
ccagaaaggctcaagcattatgatgatcacaggcaccgggatcatagtcacgggagaggc
gagaggcatcggtccctggatcggcgggagcgaggccgaagtccggacaggagaaggcaa
gacagccgctaccgatctgattatgaccgaggaaggacgccctcccgccaccggagctac
gagcggagcagagagcgggaacgggagagacacaggcaccgggacagccgaagatcacca
tctctggaaaggtcctacaaaaaagagtataaaagatctggaagtcgctccccaagtagg
gagaagaagagagctcgttgggaggaagagaaagacagatggagtgacaaccagagctct
ggcaaagagaagaattatacttcaatcaaggaaaaggagccggaggaggtgctgcctgac
aaaaatgaggaggaggaagaggaacttcttaagcctgtgtggattcggtgcacccactcg
gaaaactactactccagtgaccccatggatcaggtgggagattctactgtagttggaaca
agtaggctccgtgacttatatgacaaatttgaggaagagctggggagcaggcaagagaag
gccaaagctgctagacccccgtgggagcctcccaagacgaagctagatgaagatttagag
agttccagtgagtccgaatgtgagtccgatgaggatagcacctgttccagcagctcagac
tctgaagtcttcgacgtcattgcagaaatcaaacgcaagaaggcccaccccgaccgactc
cacgatgagctctggtacaacgacccaggccagatgaatgatggcccactctgcaaatgc
agcgcaaaggcgagacgcacaggaatcaggcacagcatttatcccggagaagaggctatt
aaaccctgtcgtcctatgaccaacaatgcgggcagacttttccactatcgaattacagtc
tcacctcctacaaactttttaactgacaggccaactgttatagaatatgatgatcatgag
tatatattcgaaggattttctatgtttgcacatgcccccctgaccaatattccgctgtgt
aaagtaattcgattcaacatagactacacgattcatttcattgaagagatgatgcctgag
aatttttgtgtgaaaggacttgaactcttttcattattcctattcagagatattttggaa
ttgtatgactggaatcttaaaggtcctttgtttgaagacagtcctccctgctgcccaaga
tttcatttcatgccacgttttgtaaggtttcttccagatggaggaaaggaagtgctgtcc
atgcaccagattctcctgtacttgttacgatgtagcaaagccctggttccagaagaggag
attgccaatatgcttcagtgggaggaacttgagtggcagaaatatgcagaagaatgcaag
ggcatgatcgtcaccaaccctggaacgaaaccaagctctgtccgcatcgatcaactggat
cgtgaacagttcaaccccgatgtgattacttttccgattattgtccactttgggatacgc
cctgcacagttgagttatgctggagacccacagtaccagaaactgtggaagagttatgtg
aagcttcgccacctcctagcaaatagtcccaaagtcaaacaaactgacaagcagaagctg
gcacagagggaggaagcgctccaaaaaatacgacagaagaataccatgagacgagaagta
acagtggagctgagtagccaaggattctggaaaactggcatccgttctgatgtctgtcag
catgcaatgatgctgcctgttttgacccatcatattcgctaccaccaatgcctaatgcat
ctggacaaattgataggatatactttccaagatcgttgtctgttacagctggccatgact
catccaagtcatcacttaaattttggaatgaatcccgatcatgccaggaattctttgtct
aactgtggaattcggcaacccaaatatggagatagaaaagttcatcacatgcacatgcgg
aaaaaaggaattaacaccttaataaatattatgtcacgccttggccaagatgacccaact
ccctcaaggattaatcacaatgagcggttggagttcctgggtgatgctgttgttgaattt
ctgaccagtgtccatttgtactacttgtttcccagtctggaagagggaggactagcaacc
tatcggactgccatcgttcagaaccagcacctcgccatgctggcgaagaaacttgaactg
gatcgatttatgctttatgctcatggacccgacctttgcagagaatcagaccttcgacat
gcaatggctaattgttttgaagcattaataggagctgtctacttggagggaagcctggag
gaagccaaacagttatttggacgcttgctctttaatgatccggatctgcgtgaagtctgg
cttaattatcctctccacccactccagctacaagagccaaatactgatcgacaacttatt
gagacttctccagttctacagaaacttactgaatttgaagacgcaattggagtaattttt
acccatgttcgacttttggcaagagcattcacgttgagaacggtgggatttaaccatctg
accctaggccacaatcagaggatggaattcctaggtgactccataatgcagctggtagcc
acagaatacttattcattcatttcccagatcatcatgaaggacacctaacattgctgcga
agctctttggtgaataacagaactcaagccaaggtagcagaagaactgggcatgcaggaa
tacgccatcaccaatgacaagaccaagaggcctgtggcccttaggaccaagaccttggca
gaccttttggaatcatttattgcagcactgtacattgataaggatttggaatatgttcat
actttcatgaatgtttgtttctttccgcgattaaaagagttcattttgaatcaggattgg
aatgaccccaaatctcagcttcagcagtgctgcttgacacttaggacagaagggaaagag
ccagacattcctctgtacaagaccctgcagacagtgggaccatcccatgcgagaacctac
accgtggctgtctacttcaagggagaacgaatcggctgtgggaaaggaccaagtattcag
caagcagaaatgggagcagcaatggatgcacttgaaaaatataactttccccagatggcc
catcagaagcggttcattgaacggaaatacagacaagagttaaaagaaatgaggtgggaa
agagagcatcaggagaaagagccagatgagactgaagacataaagaaatga
DBGET
integrated database retrieval system
