Vicugna pacos (alpaca): 102534140
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Entry
102534140 CDS
T08098
Symbol
GEMIN5
Name
(RefSeq) gem-associated protein 5 isoform X2
KO
K13133
gem associated protein 5
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpc03019
]
102534140 (GEMIN5)
03041 Spliceosome [BR:
vpc03041
]
102534140 (GEMIN5)
Messenger RNA biogenesis [BR:
vpc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102534140 (GEMIN5)
mRNA cycle factors
P-body specific factors
102534140 (GEMIN5)
Spliceosome [BR:
vpc03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
102534140 (GEMIN5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GEMI5_RBS
TPR_GEMI5
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_RIG_2nd
Beta-prop_WDR5
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_RIG_1st
Beta-prop_WDR75_1st
Beta-prop_Aladin
WD40_Gbeta
WDR90_beta-prop_4th
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_WDR35_TULP_N
MIOS_WD40
NBCH_WD40
WD40_MABP1-WDR62_1st
WD_LRWD1
TPR_IF140-IFT172
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
102534140
NCBI-ProteinID:
XP_006215041
UniProt:
A0A6I9IK21
LinkDB
All DBs
Position
3
AA seq
1509 aa
AA seq
DB search
MGQEPRVLPPSPNWYCARCSDAVPGGLFGFAARTSVFLVRVGPGADAIPGTPPFRVIGEL
VGHTERVSGFTFSHHPGQYNLCATSSDDGTVKIWDVETKTVVMEHALHQHTISALHWSPR
VKDLIVSGDEKGVVFCYWLNRNDSQHLFIEPRTILCLTCSPHHEDLIAIGYKDGIVVITD
ISKKGEVIHRLRGHDDEIHSIAWCPLPGEDCLSINQEENSEEPEIPNGKVPAQTPVAKGC
YLATGSKDQTIRIWSCSRGRGVMMLKLPSLKRRGGGIDPTVKERLWLTLHWPKDQPTQLV
SSCFGGELLLWDLTLSWRRKYTLFSASSEGQNHSRIVFNLCPLQTEDDKQLLLSTSMDRD
VKCWDMATLECCWTLPSLGGFAYSLAFSPVDTGCLAIGVGDGMIRIWNTLSIKNNYDVKN
FWQGVKSKVTALCWHPTKEGCLAFGTDDGKVGLYDTYSSKPPQISSTYHKKTVYTLAWGP
PVPPTALGGEGDRPSLTLYSCGGEGIVLQHNPWKLSGEAFDINKLIRDTNSITYKLPVHT
EISWKADGKIMALGNEDGSIEIFRVPNLKLICTIQQHHKLVNTISWHHEHGSQPELSYLM
ASGSNNAVIYVHNLQTVIESNSESPVTITEPYRTLSGHTAKITSLAWSPHHDGRLVSASY
DGTAQVWDTLQEEPLCNFRGHRGRLFCVVWSPLDPDCIYSGADDFCVYKWLTSMQEHSRP
PQGKKSIELEKKRLSQPKPKPKKKKKPTSRVPIKQELCDQNEDEGMKESSGPVENGVSDQ
ETEEEAREPELPCAVTSAVSKEPISCTPVSVGFEKSKVTINNKVTLLKKELPKEKSEALM
KKRKARSILPLSTSLDHRSKEEIHQDCLVLATAKHSKEPNEDVSADLEERFHLGLFTDRA
TLYRMIEVEGKGHLENGHPELFHQLMLWKGDLKGVLRTAAERGELTDNLVAMAPVAGYHV
WVWAVEAFAKQLCFQDQYVKAASHLLSIHKVYEAVELLKSNHFYREAIAVAKARLRPEDP
ILKDLYLSWGAVLEKDGHYALAAKCYLGATSAYDAAKVLSKKGDATSLRTAAELASIVGE
NELSASLALRCAQELLLARNWVGAQEALQLHESLKGQRLVFCLLELLSKHLEEKQLLEVK
SSSSYNAWTAGGEGPFVERVTAVWKRAFSLDSPEQYQAAFRQLQSVKYPSATSNTPSKQL
LLHLCHDLTLAVLSQQVASWDTAVEGLLRAVMRSYDSGNFTIMQEVHSAFLPEGCDHLRD
KLGDHQFPTTPAFKSLEAFFIYGRLYEFWWSLSGPYPESSIWVRAAHRRTTSAEQSQQLD
NVSPEETEPKASQPEPSRPPELDMRLTEEGEQILSACKELFSEEHASLQNSQRTVAEVQE
TLADMIRQHQKRQLCKPTADGPAKNEPEQEAEQSLSGSQHQCKEEKSEPVSLPELTKRLT
EANERIAKFPESIKTWPFPDVLECCLILLHIKSQHPGCVTHEMQQQAQELLQKYSNTKVY
KRHCQTFCT
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atggggcaggagccgcgtgtgctgccgccctcccctaactggtattgtgcccgatgcagc
gatgcagtgcccgggggcctcttcggtttcgccgcgcggacctccgtcttccttgtccgc
gtgggcccgggcgcggacgcgatcccggggacgcccccatttcgagtcataggggagttg
gtgggacacaccgaaagggtctctggcttcaccttttctcatcatccgggtcaatacaac
ctctgcgccaccagctcggacgacgggactgtgaaaatctgggatgtagagacaaaaaca
gttgtaatggaacatgcactccatcagcatacaatatcagcattgcattggtctcctcga
gtaaaggatttaatagtatctggagatgaaaagggagtagttttctgttactggcttaac
agaaatgacagccagcacctctttattgaacccaggacaattttatgtcttacttgctca
cctcatcatgaagatttaatagccattggctacaaggatggcatagtggttataactgat
atcagtaagaaaggagaagttattcacaggcttcgaggccatgatgatgagatccactcc
atagcctggtgtcccctgcctggtgaagattgtttatccataaatcaagaggaaaattca
gaagaacctgaaattcccaatgggaaagttccagcacaaactccagtagcaaaaggctgc
tacttagccactggaagcaaagaccagaccattcgaatctggagctgctctagaggccga
ggggtgatgatgttgaaattgccctctctaaagagaagaggagggggtatagacccaact
gttaaagagcgcctttggttgacactccattggcccaaggatcagccgacacagctggta
tccagctgttttggaggtgaactgctgctctgggatctcactctgtcttggagacggaaa
tataccctcttcagcgcttcatcagaagggcaaaatcattcaagaattgtgtttaattta
tgtcctctacaaaccgaggatgacaaacagctgctgctttccacgtcaatggacagagat
gtaaaatgttgggacatggccaccctagagtgctgctggaccctgccttcccttggaggg
tttgcctacagtctggctttctctcctgtggacacaggctgtttggccataggcgttggg
gatggcatgatccgcatctggaatacactctccataaagaacaactatgatgtgaaaaat
ttttggcagggtgtcaagtccaaggttacagcgctgtgctggcacccaaccaaggaaggc
tgcttagcttttggaactgacgatggaaaagtgggattgtacgacacctactccagcaaa
cctccacagatttctagcacatatcataagaagactgtgtacacattagcctgggggcca
cccgtaccccccacagcactcggaggagaaggagacagaccatcactcaccttatacagc
tgtggaggagaggggattgtcttacagcacaacccctggaaactcagtggagaggccttt
gacatcaacaaactcatcagggacaccaattcaatcacatacaaattgccagtacacaca
gagatcagctggaaagcagatggcaaaatcatggctcttggcaatgaagatggatcaata
gaaatattcagggttcctaacttgaaactgatctgcaccatccagcagcatcacaagctt
gtgaatactattagctggcatcatgagcatggcagccagccagagctgagctatctgatg
gcctctgggtccaacaatgcagtcatttatgtgcacaacctgcagactgtcatagagagc
aattctgaatctccggtgaccattacagagccctaccggaccctctcagggcacacagcc
aagattaccagtctggcatggagcccacatcatgatggaaggctggtatctgcttcctat
gatggtacagctcaggtgtgggatactctccaggaagagcctctatgcaatttccgagga
catcgaggtcgactgttttgtgtggtgtggtccccactggatccagactgcatctactca
ggggcagatgacttctgtgtgtacaaatggctcacttccatgcaagaacattcccggcct
cctcaaggcaagaaaagtattgaattagagaaaaaaaggctctctcagcctaagccaaaa
ccaaaaaagaagaaaaagcccacctcgagagtgcctataaagcaggaattgtgtgaccag
aatgaagacgagggcatgaaagagagctcgggccctgttgagaacggcgtgtcggaccag
gagaccgaggaggaagcccgggagccagagctaccctgtgctgtcacctcagccgtttct
aaagaaccaattagctgcactccagtttctgtaggttttgaaaagtcaaaagtcaccatt
aataacaaagtcactttactgaaaaaggagctacctaaagagaagtcagaagccttaatg
aagaagcgaaaagctcgttccatccttccactgagtacgagcctggaccacagatccaaa
gaggagattcatcaggactgtttggtgttagccactgcaaaacactccaaagagccaaat
gaggatgtgtctgctgaccttgaggaaagatttcacctggggctattcacagacagggct
accctgtacagaatgattgaagttgaaggaaaagggcacttggaaaatggccaccctgag
ttatttcaccagctcatgctttggaaaggagatctaaaaggtgttctccggactgcagca
gagagaggagagctgacagacaatctcgtggctatggcaccagtggctggttaccatgtg
tgggtatgggctgtggaggcttttgccaaacagctgtgtttccaggaccagtatgtcaag
gctgcctctcacttgctttctatccacaaagtgtacgaagctgtggagctgctcaagtca
aaccatttctacagggaggctattgcagttgccaaggcccggctgcgcccagaggacccg
atcctgaaagacctgtacctcagctggggggccgtcctagaaaaagatggccattatgct
ttagcagccaagtgctatttaggggccacttcagcttatgatgcagccaaagttttgtca
aaaaagggggacgcgacatcacttagaactgctgcagagctggcttcaatcgtaggagag
aatgagttgtctgcttccctggctctcagatgtgcccaagagctgcttctggccaggaac
tgggtgggagcccaggaagccctgcagcttcacgaaagtctaaagggtcagagactggtg
ttttgccttcttgagctactgtccaagcacctggaggaaaagcagcttttggaggtcaaa
agttcctcttcttacaatgcttggaccgcaggcggcgaagggccctttgtggagagagtg
actgcggtgtggaagagagccttcagcctcgactccccagagcagtatcaggcagcattt
cggcaactgcagagtgtcaagtacccttctgctacaagtaacactccctccaaacagctc
ctgcttcacctttgccatgacctgaccctggcagtgctgagccagcaggtggcctcctgg
gacacagctgtggaaggactgcttcgggctgtaatgcggagctacgactcaggaaacttc
accatcatgcaggaagtgcactcagcctttcttcctgagggctgtgaccaccttagagac
aaactgggtgaccatcagttccccaccacaccagctttcaaaagtttggaggcttttttt
atttacggacgtctgtatgaattctggtggtctctctctgggccttaccctgaatccagc
atctgggtaagggctgctcacagaaggacgacttctgctgagcaaagccagcagttggac
aatgtcagccctgaagaaactgagcccaaagcttctcagccagagccaagcaggcctcca
gaactagacatgagactcacagaagaaggtgagcaaatactgagcgcttgtaaggagctc
ttttcagaagagcacgccagtctccaaaattcacagagaactgttgctgaagttcaagaa
accctggcagacatgatccgccaacaccagaagagacaactctgcaaacccacggcagac
ggtcctgctaagaatgaacctgaacaggaagcagaacagtccctctctggttctcagcac
cagtgtaaagaagaaaaaagtgagccagtttctttgcctgaattaaccaaaaggcttaca
gaagcgaatgagagaatagctaagtttcctgagagtattaagacctggcccttcccagat
gtgctggagtgctgcctcatcctgcttcacatcaagtctcaacatcctggctgtgtgacg
cacgaaatgcagcaacaggctcaagagctccttcagaaatacagcaacactaaagtttac
aaaagacactgccagaccttctgcacatga
DBGET
integrated database retrieval system
